RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 KLLNB2CW77 178 aa10.61□□□□□ -0.71
MSH5-206ENST00000423982 P0DMU3 169 aa10.61□□□□□ -0.71
MSH5-206ENST00000423982 FAM231AP0DMU4 169 aa10.61□□□□□ -0.71
MSH5-206ENST00000423982 FAM231CP0DMU5 169 aa10.61□□□□□ -0.71
MSH5-206ENST00000423982 ZNF56Q15929 161 aa10.61□□□□□ -0.71
MSH5-206ENST00000423982 LYRM7Q5U5X0 104 aa10.61□□□□□ -0.71
MSH5-206ENST00000423982 TMEM141Q96I45 108 aa10.61□□□□□ -0.71
MSH5-206ENST00000423982 IGHV3-33P01772 117 aa10.61□□□□□ -0.71
MSH5-206ENST00000423982 NSD1Q96L73 2696 aaPredicted RBP10.61□□□□□ -0.71
MSH5-206ENST00000423982 A0A0J9YXV3 536 aa10.6□□□□□ -0.71
MSH5-206ENST00000423982 TRBV27A0A0K0K1C4 114 aa10.6□□□□□ -0.71
MSH5-206ENST00000423982 TMEM263Q8WUH6 116 aaKnown RBP10.6□□□□□ -0.71
MSH5-206ENST00000423982 MAST4O15021 2626 aa10.59□□□□□ -0.71
MSH5-206ENST00000423982 TMEM223A0PJW6 202 aa10.59□□□□□ -0.71
MSH5-206ENST00000423982 TMEM95Q3KNT9 176 aa10.59□□□□□ -0.71
MSH5-206ENST00000423982 M0QY20 66 aa10.58□□□□□ -0.72
MSH5-206ENST00000423982 CRLF1O75462 422 aa10.58□□□□□ -0.72
MSH5-206ENST00000423982 ZNF22P17026 224 aaPredicted RBP10.58□□□□□ -0.72
MSH5-206ENST00000423982 Q1RN00 199 aa10.58□□□□□ -0.72
MSH5-206ENST00000423982 RNASE13Q5GAN3 156 aaKnown RBP10.58□□□□□ -0.72
MSH5-206ENST00000423982 NTN5Q8WTR8 489 aaPredicted RBP10.58□□□□□ -0.72
MSH5-206ENST00000423982 ERG28Q9UKR5 140 aa10.58□□□□□ -0.72
MSH5-206ENST00000423982 FN1P02751 2386 aaKnown RBP10.58□□□□□ -0.72
MSH5-206ENST00000423982 RPL32P62910 135 aaKnown RBP10.58□□□□□ -0.72
MSH5-206ENST00000423982 Q6ZSV7 163 aa10.58□□□□□ -0.72
MSH5-206ENST00000423982 LGALS9O00182 355 aa10.57□□□□□ -0.72
MSH5-206ENST00000423982 CEMP1Q6PRD7 247 aaPredicted RBP10.57□□□□□ -0.72
MSH5-206ENST00000423982 Q8N1Y9 231 aa10.57□□□□□ -0.72
MSH5-206ENST00000423982 ANAPC13Q9BS18 74 aa10.57□□□□□ -0.72
MSH5-206ENST00000423982 NPC2P61916 151 aa10.57□□□□□ -0.72
MSH5-206ENST00000423982 DCANP1Q8TF63 244 aa10.57□□□□□ -0.72
MSH5-206ENST00000423982 SPXQ9BT56 116 aa10.57□□□□□ -0.72
MSH5-206ENST00000423982 IGHV3-73A0A0B4J1V6 119 aa10.57□□□□□ -0.72
MSH5-206ENST00000423982 IGHV3-16A0A0C4DH30 117 aa10.57□□□□□ -0.72
MSH5-206ENST00000423982 TEX49A0A1B0GTD5 131 aa10.57□□□□□ -0.72
MSH5-206ENST00000423982 CYSRT1A8MQ03 144 aa10.57□□□□□ -0.72
MSH5-206ENST00000423982 RHODO00212 210 aa10.57□□□□□ -0.72
MSH5-206ENST00000423982 FSHBP01225 129 aa10.57□□□□□ -0.72
MSH5-206ENST00000423982 DAZ1Q9NQZ3 744 aaKnown RBP10.57□□□□□ -0.72
MSH5-206ENST00000423982 TRAV8-3A0A0A6YYJ7 113 aa10.56□□□□□ -0.72
MSH5-206ENST00000423982 A8MZ25 164 aa10.56□□□□□ -0.72
MSH5-206ENST00000423982 LEPROTO15243 131 aa10.56□□□□□ -0.72
MSH5-206ENST00000423982 VCX2Q9H322 139 aa10.56□□□□□ -0.72
MSH5-206ENST00000423982 TRAV4A0A0B4J268 109 aa10.56□□□□□ -0.72
MSH5-206ENST00000423982 A6NDX4 124 aa10.56□□□□□ -0.72
MSH5-206ENST00000423982 SPINK13Q1W4C9 94 aa10.56□□□□□ -0.72
MSH5-206ENST00000423982 C10orf99Q6UWK7 81 aa10.56□□□□□ -0.72
MSH5-206ENST00000423982 SS18L2Q9UHA2 77 aa10.56□□□□□ -0.72
MSH5-206ENST00000423982 LY6G6DO95868 133 aa10.55□□□□□ -0.72
MSH5-206ENST00000423982 ZFAND6Q6FIF0 208 aa10.55□□□□□ -0.72
MSH5-206ENST00000423982 TRBV6-5A0A0K0K1A5 114 aa10.55□□□□□ -0.72
MSH5-206ENST00000423982 PRM2P04554 102 aa10.55□□□□□ -0.72
MSH5-206ENST00000423982 PROK1P58294 105 aa10.55□□□□□ -0.72
MSH5-206ENST00000423982 CITED1Q99966 193 aa10.55□□□□□ -0.72
MSH5-206ENST00000423982 Q9UF83 564 aa10.55□□□□□ -0.72
MSH5-206ENST00000423982 IGLV4-3A0A075B6K6 122 aa10.54□□□□□ -0.72
MSH5-206ENST00000423982 A0A0J9YXY3 114 aa10.54□□□□□ -0.72
MSH5-206ENST00000423982 NHLRC4P0CG21 123 aaPredicted RBP10.54□□□□□ -0.72
MSH5-206ENST00000423982 HTN1P15515 57 aa10.54□□□□□ -0.72
MSH5-206ENST00000423982 TEX29Q8N6K0 151 aa10.54□□□□□ -0.72
MSH5-206ENST00000423982 C20orf203Q8NBC4 194 aa10.54□□□□□ -0.72
MSH5-206ENST00000423982 C9orf85Q96MD7 179 aa10.54□□□□□ -0.72
MSH5-206ENST00000423982 TRIAP1O43715 76 aa10.54□□□□□ -0.72
MSH5-206ENST00000423982 PRSS2P07478 247 aa10.54□□□□□ -0.72
MSH5-206ENST00000423982 IGHG2P01859 326 aa10.53□□□□□ -0.72
MSH5-206ENST00000423982 ADAMTSL4-AS1Q5T5F5 129 aa10.53□□□□□ -0.72
MSH5-206ENST00000423982 USMG5Q96IX5 58 aa10.53□□□□□ -0.72
MSH5-206ENST00000423982 TRBV7-9A0A0J9YWB2 115 aa10.53□□□□□ -0.72
MSH5-206ENST00000423982 NSUN5P1Q3KNT7 163 aa10.53□□□□□ -0.72
MSH5-206ENST00000423982 LINC01620Q4KN68 170 aa10.53□□□□□ -0.72
MSH5-206ENST00000423982 Q6YL49 198 aa10.53□□□□□ -0.72
MSH5-206ENST00000423982 IGHV3-30-3P0DP02 117 aa10.52□□□□□ -0.72
MSH5-206ENST00000423982 FAM104AQ969W3 186 aa10.52□□□□□ -0.72
MSH5-206ENST00000423982 A0A0B4J2C4 111 aa10.52□□□□□ -0.73
MSH5-206ENST00000423982 B5MCH6 92 aa10.52□□□□□ -0.73
MSH5-206ENST00000423982 M0R2P5 195 aa10.52□□□□□ -0.73
MSH5-206ENST00000423982 HIST2H2BDQ6DRA6 164 aa10.52□□□□□ -0.73
MSH5-206ENST00000423982 VPREB3Q9UKI3 123 aa10.52□□□□□ -0.73
MSH5-206ENST00000423982 INAFM1C9JVW0 142 aa10.51□□□□□ -0.73
MSH5-206ENST00000423982 TMEM262E9PQX1 116 aa10.51□□□□□ -0.73
MSH5-206ENST00000423982 LITAFQ99732 161 aa10.51□□□□□ -0.73
MSH5-206ENST00000423982 ID1P41134 155 aa10.5□□□□□ -0.73
MSH5-206ENST00000423982 NACAE9PAV3 2078 aa10.5□□□□□ -0.73
MSH5-206ENST00000423982 I3L3M4 83 aa10.5□□□□□ -0.73
MSH5-206ENST00000423982 RHOHQ15669 191 aa10.5□□□□□ -0.73
MSH5-206ENST00000423982 KNCNA6PVL3 124 aa10.49□□□□□ -0.73
MSH5-206ENST00000423982 ATXN8Q156A1 80 aa10.49□□□□□ -0.73
MSH5-206ENST00000423982 CLEC2BQ92478 149 aa10.49□□□□□ -0.73
MSH5-206ENST00000423982 ESM1Q9NQ30 184 aa10.49□□□□□ -0.73
MSH5-206ENST00000423982 IGHV1OR15-1A0A075B7D0 117 aa10.49□□□□□ -0.73
MSH5-206ENST00000423982 A0A0J9YX75 114 aa10.49□□□□□ -0.73
MSH5-206ENST00000423982 IGLV1-40P01703 118 aa10.49□□□□□ -0.73
MSH5-206ENST00000423982 CD28P10747 220 aa10.49□□□□□ -0.73
MSH5-206ENST00000423982 DAND5Q8N907 189 aa10.49□□□□□ -0.73
MSH5-206ENST00000423982 ODF3Q96PU9 254 aa10.49□□□□□ -0.73
MSH5-206ENST00000423982 TIMM21Q9BVV7 248 aa10.49□□□□□ -0.73
MSH5-206ENST00000423982 SNCGO76070 127 aa10.49□□□□□ -0.73
MSH5-206ENST00000423982 DNAJC9-AS1A6NH13 148 aa10.48□□□□□ -0.73
MSH5-206ENST00000423982 GAGE2BQ13066 116 aa10.48□□□□□ -0.73
MSH5-206ENST00000423982 GAGE2EQ4V326 116 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms