RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 C20orf78Q9BR46 151 aa4.77□□□□□ -1.65
CPS1-202ENST00000417946 TMEM70Q9BUB7 260 aa4.77□□□□□ -1.65
CPS1-202ENST00000417946 NIT2Q9NQR4 276 aa4.77□□□□□ -1.65
CPS1-202ENST00000417946 STARD9Q9P2P6 4700 aa4.77□□□□□ -1.65
CPS1-202ENST00000417946 DNAH7Q8WXX0 4024 aa4.76□□□□□ -1.65
CPS1-202ENST00000417946 TRBV10-1A0A0K0K1A3 114 aa4.76□□□□□ -1.65
CPS1-202ENST00000417946 LOC389332A0A1B0GUA5 103 aa4.76□□□□□ -1.65
CPS1-202ENST00000417946 TEX48A0A1B0GUV7 120 aa4.76□□□□□ -1.65
CPS1-202ENST00000417946 SDHAF1A6NFY7 115 aa4.76□□□□□ -1.65
CPS1-202ENST00000417946 CIDEAO60543 219 aa4.76□□□□□ -1.65
CPS1-202ENST00000417946 ATP5G1P05496 136 aa4.76□□□□□ -1.65
CPS1-202ENST00000417946 PTTG1IPP53801 180 aa4.76□□□□□ -1.65
CPS1-202ENST00000417946 NIT1Q86X76 327 aa4.76□□□□□ -1.65
CPS1-202ENST00000417946 MAP1LC3AQ9H492 121 aa4.76□□□□□ -1.65
CPS1-202ENST00000417946 ST20Q9HBF5 79 aa4.76□□□□□ -1.65
CPS1-202ENST00000417946 PLECQ15149 4684 aaKnown RBP4.75□□□□□ -1.65
CPS1-202ENST00000417946 TRGV4A0A0C4DH28 118 aa4.75□□□□□ -1.65
CPS1-202ENST00000417946 IGHV1-24A0A0C4DH33 117 aa4.75□□□□□ -1.65
CPS1-202ENST00000417946 LOC105371267A0A1B0GV96 52 aa4.75□□□□□ -1.65
CPS1-202ENST00000417946 H7C1H1 209 aa4.75□□□□□ -1.65
CPS1-202ENST00000417946 TCAPO15273 167 aa4.75□□□□□ -1.65
CPS1-202ENST00000417946 RHOHQ15669 191 aa4.75□□□□□ -1.65
CPS1-202ENST00000417946 PMCHL1Q16048 86 aa4.75□□□□□ -1.65
CPS1-202ENST00000417946 DGAT2L7PQ6IED9 249 aa4.75□□□□□ -1.65
CPS1-202ENST00000417946 RNASEKQ6P5S7 137 aaKnown RBP4.75□□□□□ -1.65
CPS1-202ENST00000417946 BAGE3Q86Y29 109 aa4.75□□□□□ -1.65
CPS1-202ENST00000417946 C11orf45Q8TAV5 145 aa4.75□□□□□ -1.65
CPS1-202ENST00000417946 DEFB104AQ8WTQ1 72 aa4.75□□□□□ -1.65
CPS1-202ENST00000417946 DNAJC30Q96LL9 226 aa4.75□□□□□ -1.65
CPS1-202ENST00000417946 TRAV26-1A0A087WT03 109 aa4.74□□□□□ -1.65
CPS1-202ENST00000417946 IGHV3-38A0A0C4DH36 116 aa4.74□□□□□ -1.65
CPS1-202ENST00000417946 A0A0J9YY99 117 aa4.74□□□□□ -1.65
CPS1-202ENST00000417946 GAGE12JA6NER3 117 aa4.74□□□□□ -1.65
CPS1-202ENST00000417946 PPP1R17O96001 155 aa4.74□□□□□ -1.65
CPS1-202ENST00000417946 LINC00614P0C842 121 aa4.74□□□□□ -1.65
CPS1-202ENST00000417946 GAGE1Q13065 139 aa4.74□□□□□ -1.65
CPS1-202ENST00000417946 GAGE4Q13068 117 aa4.74□□□□□ -1.65
CPS1-202ENST00000417946 GAGE5Q13069 117 aa4.74□□□□□ -1.65
CPS1-202ENST00000417946 GAGE13Q4V321 117 aa4.74□□□□□ -1.65
CPS1-202ENST00000417946 PDZD11Q5EBL8 140 aa4.74□□□□□ -1.65
CPS1-202ENST00000417946 PET117Q6UWS5 81 aa4.74□□□□□ -1.65
CPS1-202ENST00000417946 NTM-AS1Q6ZSK4 140 aa4.74□□□□□ -1.65
CPS1-202ENST00000417946 LINC00173Q6ZV60 143 aa4.74□□□□□ -1.65
CPS1-202ENST00000417946 FAM19A2Q8N3H0 131 aa4.74□□□□□ -1.65
CPS1-202ENST00000417946 ZNRF2Q8NHG8 242 aa4.74□□□□□ -1.65
CPS1-202ENST00000417946 FAM104AQ969W3 186 aa4.74□□□□□ -1.65
CPS1-202ENST00000417946 CHCHD1Q96BP2 118 aaKnown RBP4.74□□□□□ -1.65
CPS1-202ENST00000417946 HIST1H2BLQ99880 126 aa4.74□□□□□ -1.65
CPS1-202ENST00000417946 CHCHD7Q9BUK0 85 aa4.74□□□□□ -1.65
CPS1-202ENST00000417946 NXT2Q9NPJ8 142 aaKnown RBP4.74□□□□□ -1.65
CPS1-202ENST00000417946 PRO0255Q9UI72 69 aa4.74□□□□□ -1.65
CPS1-202ENST00000417946 HHLA3Q9XRX5 114 aa4.74□□□□□ -1.65
CPS1-202ENST00000417946 TRBV7-3A0A075B6L6 115 aa4.73□□□□□ -1.65
CPS1-202ENST00000417946 F5H768 121 aa4.73□□□□□ -1.65
CPS1-202ENST00000417946 VCYO14598 125 aa4.73□□□□□ -1.65
CPS1-202ENST00000417946 GYPEP15421 78 aa4.73□□□□□ -1.65
CPS1-202ENST00000417946 HTN3P15516 51 aa4.73□□□□□ -1.65
CPS1-202ENST00000417946 PMCHP20382 165 aa4.73□□□□□ -1.65
CPS1-202ENST00000417946 FA2HQ7L5A8 372 aa4.73□□□□□ -1.65
CPS1-202ENST00000417946 PRSS3P2Q8NHM4 247 aa4.73□□□□□ -1.65
CPS1-202ENST00000417946 PHLDA1Q8WV24 401 aaPredicted RBP4.73□□□□□ -1.65
CPS1-202ENST00000417946 TNFRSF18Q9Y5U5 241 aa4.73□□□□□ -1.65
CPS1-202ENST00000417946 DEFB131BA0A096LNP1 70 aa4.72□□□□□ -1.65
CPS1-202ENST00000417946 A0A096LPF7 62 aa4.72□□□□□ -1.65
CPS1-202ENST00000417946 I3L3M4 83 aa4.72□□□□□ -1.65
CPS1-202ENST00000417946 S100A6P06703 90 aa4.72□□□□□ -1.65
CPS1-202ENST00000417946 RPL36AP83881 106 aaKnown RBP4.72□□□□□ -1.65
CPS1-202ENST00000417946 SPATA12Q7Z6I5 190 aa4.72□□□□□ -1.65
CPS1-202ENST00000417946 RPL36ALQ969Q0 106 aaKnown RBP4.72□□□□□ -1.65
CPS1-202ENST00000417946 PACRGQ96M98 296 aaPredicted RBP4.72□□□□□ -1.65
CPS1-202ENST00000417946 PRADC1Q9BSG0 188 aa4.72□□□□□ -1.65
CPS1-202ENST00000417946 TGP01266 2768 aa4.72□□□□□ -1.65
CPS1-202ENST00000417946 VPS13DQ5THJ4 4388 aa4.71□□□□□ -1.66
CPS1-202ENST00000417946 TRAV10A0A0B4J240 114 aa4.71□□□□□ -1.66
CPS1-202ENST00000417946 H3BNG1 76 aa4.71□□□□□ -1.66
CPS1-202ENST00000417946 K7EMI3 77 aa4.71□□□□□ -1.66
CPS1-202ENST00000417946 HSBP1O75506 76 aa4.71□□□□□ -1.66
CPS1-202ENST00000417946 HBDP02042 147 aa4.71□□□□□ -1.66
CPS1-202ENST00000417946 FCER1GP30273 86 aa4.71□□□□□ -1.66
CPS1-202ENST00000417946 AMTP48728 403 aa4.71□□□□□ -1.66
CPS1-202ENST00000417946 KRTAP10-2P60368 255 aa4.71□□□□□ -1.66
CPS1-202ENST00000417946 RPL39P62891 51 aaKnown RBP4.71□□□□□ -1.66
CPS1-202ENST00000417946 LAGE3Q14657 143 aa4.71□□□□□ -1.66
CPS1-202ENST00000417946 DAZ4Q86SG3 579 aaKnown RBP4.71□□□□□ -1.66
CPS1-202ENST00000417946 Q8N976 141 aa4.71□□□□□ -1.66
CPS1-202ENST00000417946 C20orf203Q8NBC4 194 aa4.71□□□□□ -1.66
CPS1-202ENST00000417946 DAZ3Q9NR90 486 aaKnown RBP4.71□□□□□ -1.66
CPS1-202ENST00000417946 CSMD3Q7Z407 3707 aa4.7□□□□□ -1.66
CPS1-202ENST00000417946 IGIPA6NJ69 53 aa4.7□□□□□ -1.66
CPS1-202ENST00000417946 FABP4P15090 132 aa4.7□□□□□ -1.66
CPS1-202ENST00000417946 ORMDL2Q53FV1 153 aa4.7□□□□□ -1.66
CPS1-202ENST00000417946 C2orf66Q6UXQ4 117 aa4.7□□□□□ -1.66
CPS1-202ENST00000417946 ATP6V0E2Q8NHE4 81 aa4.7□□□□□ -1.66
CPS1-202ENST00000417946 TOMM6Q96B49 74 aa4.7□□□□□ -1.66
CPS1-202ENST00000417946 GTSF1LQ9H1H1 148 aa4.7□□□□□ -1.66
CPS1-202ENST00000417946 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.69□□□□□ -1.66
CPS1-202ENST00000417946 IGKV2-29A2NJV5 120 aaPredicted RBP4.69□□□□□ -1.66
CPS1-202ENST00000417946 NUDT3O95989 172 aa4.69□□□□□ -1.66
CPS1-202ENST00000417946 PLA2G1BP04054 148 aaKnown RBP4.69□□□□□ -1.66
CPS1-202ENST00000417946 TIRAPP58753 221 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms