RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 LDLRAD2Q5SZI1 272 aa1.61□□□□□ -2.15
MCF2-204ENST00000414978 TMEM167AQ8TBQ9 72 aa1.61□□□□□ -2.15
MCF2-204ENST00000414978 UBE2WQ96B02 151 aa1.61□□□□□ -2.15
MCF2-204ENST00000414978 METTL1Q9UBP6 276 aaKnown RBP1.61□□□□□ -2.15
MCF2-204ENST00000414978 MINOS1-NBL1R4GNA1 71 aa1.61□□□□□ -2.15
MCF2-204ENST00000414978 NBEAL2Q6ZNJ1 2754 aa1.61□□□□□ -2.15
MCF2-204ENST00000414978 TRBV20OR9-2A0A075B6H5 130 aa1.61□□□□□ -2.15
MCF2-204ENST00000414978 LTAP01374 205 aa1.61□□□□□ -2.15
MCF2-204ENST00000414978 HLA-DMBP28068 263 aa1.61□□□□□ -2.15
MCF2-204ENST00000414978 AKR1C3P42330 323 aa1.61□□□□□ -2.15
MCF2-204ENST00000414978 HES1Q14469 280 aa1.61□□□□□ -2.15
MCF2-204ENST00000414978 MMDQ15546 238 aa1.61□□□□□ -2.15
MCF2-204ENST00000414978 MINOS1Q5TGZ0 78 aa1.61□□□□□ -2.15
MCF2-204ENST00000414978 RNF5Q99942 180 aa1.61□□□□□ -2.15
MCF2-204ENST00000414978 NPCDR1Q9BY65 106 aa1.61□□□□□ -2.15
MCF2-204ENST00000414978 NPVFQ9HCQ7 196 aa1.61□□□□□ -2.15
MCF2-204ENST00000414978 NDUFA4L2Q9NRX3 87 aa1.61□□□□□ -2.15
MCF2-204ENST00000414978 SLC39A9Q9NUM3 307 aa1.61□□□□□ -2.15
MCF2-204ENST00000414978 NACAE9PAV3 2078 aa1.61□□□□□ -2.15
MCF2-204ENST00000414978 MAP1LC3B2A6NCE7 125 aa1.61□□□□□ -2.15
MCF2-204ENST00000414978 ODF3BA8MYP8 253 aa1.61□□□□□ -2.15
MCF2-204ENST00000414978 OOSP1A8MZH6 123 aa1.61□□□□□ -2.15
MCF2-204ENST00000414978 CYB5BO43169 146 aa1.61□□□□□ -2.15
MCF2-204ENST00000414978 LGALS1P09382 135 aaKnown RBP1.61□□□□□ -2.15
MCF2-204ENST00000414978 SFTA3P0C7M3 94 aa1.61□□□□□ -2.15
MCF2-204ENST00000414978 RPL27AP46776 148 aaKnown RBP1.61□□□□□ -2.15
MCF2-204ENST00000414978 PSG9Q00887 426 aa1.61□□□□□ -2.15
MCF2-204ENST00000414978 BATFQ16520 125 aa1.61□□□□□ -2.15
MCF2-204ENST00000414978 C10orf55Q5SWW7 151 aa1.61□□□□□ -2.15
MCF2-204ENST00000414978 LCN15Q6UWW0 184 aa1.61□□□□□ -2.15
MCF2-204ENST00000414978 SVBPQ8N300 66 aa1.61□□□□□ -2.15
MCF2-204ENST00000414978 OR2T10Q8NGZ9 312 aa1.61□□□□□ -2.15
MCF2-204ENST00000414978 KRTAP2-2Q9BYT5 123 aa1.61□□□□□ -2.15
MCF2-204ENST00000414978 MAP1LC3BQ9GZQ8 125 aa1.61□□□□□ -2.15
MCF2-204ENST00000414978 RPRMQ9NS64 109 aa1.61□□□□□ -2.15
MCF2-204ENST00000414978 GNG13Q9P2W3 67 aa1.61□□□□□ -2.15
MCF2-204ENST00000414978 ARHGAP32A7KAX9 2087 aa1.61□□□□□ -2.15
MCF2-204ENST00000414978 HSPG2P98160 4391 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 TRAV1-1A0A0B4J248 108 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 CTXND1A0A1B0GTU2 59 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 IGLL5B9A064 214 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 FNDC10F2Z333 226 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 RNASE2P10153 161 aaKnown RBP1.6□□□□□ -2.15
MCF2-204ENST00000414978 BRS3P32247 399 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 HCP5Q6MZN7 132 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 DCANP1Q8TF63 244 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 IGF2BP2-AS1Q96M15 143 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 SEC11CQ9BY50 192 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 SMDT1Q9H4I9 107 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 KLK12Q9UKR0 248 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 A0A1B0GW64 132 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 A0A1B0GX51 115 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 CORTO00230 105 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 NPFFO15130 113 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 MT-CO2P00403 227 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 APELAP0DMC3 54 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 CD24P25063 80 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 TCTAP57738 103 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 CCL20P78556 96 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 WT1-ASQ06250 92 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 MIC13Q5XKP0 118 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 AMTNQ6UX39 209 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 RPP25LQ8N5L8 163 aaKnown RBP1.6□□□□□ -2.15
MCF2-204ENST00000414978 OR13C6PQ8NH95 151 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 MBD3L1Q8WWY6 194 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 MALSU1Q96EH3 234 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 MGST2Q99735 147 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 NKX6-2Q9C056 277 aaPredicted RBP1.6□□□□□ -2.15
MCF2-204ENST00000414978 SLC35B3Q9H1N7 401 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 SMAD5-AS1Q9Y6J3 95 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 TNCP24821 2201 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 LOC107984640A0A0U1RRK4 108 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 IGLC7A0M8Q6 106 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 COLCA2A8K830 154 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 E7EUB6 86 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 LST1O00453 97 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 SH2D1AO60880 128 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 IGHV1-69P01742 117 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 BCL2P10415 239 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 ADCYAP1P18509 176 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 PSMB8P28062 276 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 EMP1P54849 157 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 FXYD3Q14802 87 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 KHDC3LQ587J8 217 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 MORN3Q6PF18 240 aaPredicted RBP1.6□□□□□ -2.15
MCF2-204ENST00000414978 MANBALQ9NQG1 85 aa1.6□□□□□ -2.15
MCF2-204ENST00000414978 WNK2Q9Y3S1 2297 aa1.59□□□□□ -2.15
MCF2-204ENST00000414978 TRAV40A0A0B4J280 105 aa1.59□□□□□ -2.15
MCF2-204ENST00000414978 NDUFA3O95167 84 aa1.59□□□□□ -2.15
MCF2-204ENST00000414978 MEF2BQ02080 365 aaPredicted RBP1.59□□□□□ -2.15
MCF2-204ENST00000414978 C10orf91Q5T1B1 145 aa1.59□□□□□ -2.15
MCF2-204ENST00000414978 LYRM7Q5U5X0 104 aa1.59□□□□□ -2.15
MCF2-204ENST00000414978 RASL11AQ6T310 242 aa1.59□□□□□ -2.15
MCF2-204ENST00000414978 CYP2G1PQ6ZSU1 146 aa1.59□□□□□ -2.15
MCF2-204ENST00000414978 SLC35E3Q7Z769 313 aa1.59□□□□□ -2.15
MCF2-204ENST00000414978 LINC00167Q96N53 147 aa1.59□□□□□ -2.15
MCF2-204ENST00000414978 PKD1P98161 4303 aa1.59□□□□□ -2.15
MCF2-204ENST00000414978 IGHV3-21A0A0B4J1V1 117 aa1.59□□□□□ -2.15
MCF2-204ENST00000414978 PRB2P02812 416 aaPredicted RBP1.59□□□□□ -2.15
MCF2-204ENST00000414978 SRP19P09132 144 aaKnown RBP1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms