RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 OR5AL1P0C617 328 aa4.91□□□□□ -1.62
LSM5-202ENST00000409292 SSTP61278 116 aa4.91□□□□□ -1.62
LSM5-202ENST00000409292 SPINK6Q6UWN8 80 aa4.91□□□□□ -1.62
LSM5-202ENST00000409292 OR10AG1Q8NH19 301 aa4.91□□□□□ -1.62
LSM5-202ENST00000409292 MAP1LC3BQ9GZQ8 125 aa4.91□□□□□ -1.62
LSM5-202ENST00000409292 MED28Q9H204 178 aa4.91□□□□□ -1.62
LSM5-202ENST00000409292 IGKV2-24A0A0C4DH68 120 aa4.9□□□□□ -1.63
LSM5-202ENST00000409292 A0A0J9YXV3 536 aa4.9□□□□□ -1.63
LSM5-202ENST00000409292 XKRY2A2RUG3 117 aa4.9□□□□□ -1.63
LSM5-202ENST00000409292 PANO1I0J062 215 aa4.9□□□□□ -1.63
LSM5-202ENST00000409292 CHTF8P0CG12 524 aa4.9□□□□□ -1.63
LSM5-202ENST00000409292 RAB5CP51148 216 aa4.9□□□□□ -1.63
LSM5-202ENST00000409292 RPS20P60866 119 aaKnown RBP4.9□□□□□ -1.63
LSM5-202ENST00000409292 COX6A2Q02221 97 aa4.9□□□□□ -1.63
LSM5-202ENST00000409292 COTL1Q14019 142 aa4.9□□□□□ -1.63
LSM5-202ENST00000409292 AMMECR1LQ6DCA0 310 aa4.9□□□□□ -1.63
LSM5-202ENST00000409292 BAGE2Q86Y30 109 aa4.9□□□□□ -1.63
LSM5-202ENST00000409292 STPG4Q8N801 248 aa4.9□□□□□ -1.63
LSM5-202ENST00000409292 SNAI2O43623 268 aa4.89□□□□□ -1.63
LSM5-202ENST00000409292 TRGC1P0CF51 173 aa4.89□□□□□ -1.63
LSM5-202ENST00000409292 AMTP48728 403 aa4.89□□□□□ -1.63
LSM5-202ENST00000409292 CACNG7P62955 275 aa4.89□□□□□ -1.63
LSM5-202ENST00000409292 PRR3P79522 188 aaKnown RBP4.89□□□□□ -1.63
LSM5-202ENST00000409292 RPL7L1Q6DKI1 246 aaKnown RBP4.89□□□□□ -1.63
LSM5-202ENST00000409292 KRTAP26-1Q6PEX3 210 aa4.89□□□□□ -1.63
LSM5-202ENST00000409292 RASL11AQ6T310 242 aa4.89□□□□□ -1.63
LSM5-202ENST00000409292 NTM-AS1Q6ZSK4 140 aa4.89□□□□□ -1.63
LSM5-202ENST00000409292 LYPD6BQ8NI32 183 aa4.89□□□□□ -1.63
LSM5-202ENST00000409292 TPPP3Q9BW30 176 aa4.89□□□□□ -1.63
LSM5-202ENST00000409292 FXYD6-FXYD2A0A087WZ82 144 aa4.88□□□□□ -1.63
LSM5-202ENST00000409292 IGKV3OR2-268A0A0C4DH90 116 aa4.88□□□□□ -1.63
LSM5-202ENST00000409292 MUC21A0A0G2JKD1 596 aa4.88□□□□□ -1.63
LSM5-202ENST00000409292 MUC21A0A140T8X8 626 aa4.88□□□□□ -1.63
LSM5-202ENST00000409292 FAM231BA6NCW3 169 aa4.88□□□□□ -1.63
LSM5-202ENST00000409292 GAGE12HA6NDE8 117 aa4.88□□□□□ -1.63
LSM5-202ENST00000409292 NKX2-5P52952 324 aaPredicted RBP4.88□□□□□ -1.63
LSM5-202ENST00000409292 Q6ZRP5 223 aa4.88□□□□□ -1.63
LSM5-202ENST00000409292 C20orf203Q8NBC4 194 aa4.88□□□□□ -1.63
LSM5-202ENST00000409292 PGLYRP4Q96LB8 373 aa4.88□□□□□ -1.63
LSM5-202ENST00000409292 FAT3Q8TDW7 4589 aa4.87□□□□□ -1.63
LSM5-202ENST00000409292 F2Z2F3 143 aa4.87□□□□□ -1.63
LSM5-202ENST00000409292 PAGE4O60829 102 aa4.87□□□□□ -1.63
LSM5-202ENST00000409292 ZNF726P1Q15940 193 aa4.87□□□□□ -1.63
LSM5-202ENST00000409292 KRTAP15-1Q3LI76 137 aa4.87□□□□□ -1.63
LSM5-202ENST00000409292 HIGD2BQ4VC39 106 aa4.87□□□□□ -1.63
LSM5-202ENST00000409292 FER1L6-AS1Q8NA97 138 aa4.87□□□□□ -1.63
LSM5-202ENST00000409292 BTF3L4Q96K17 158 aa4.87□□□□□ -1.63
LSM5-202ENST00000409292 NIT2Q9NQR4 276 aa4.87□□□□□ -1.63
LSM5-202ENST00000409292 BIN3Q9NQY0 253 aa4.87□□□□□ -1.63
LSM5-202ENST00000409292 ALG5Q9Y673 324 aa4.87□□□□□ -1.63
LSM5-202ENST00000409292 IGLV4-60A0A075B6I1 120 aa4.86□□□□□ -1.63
LSM5-202ENST00000409292 A0A0U1RQV1 116 aa4.86□□□□□ -1.63
LSM5-202ENST00000409292 M0QY20 66 aa4.86□□□□□ -1.63
LSM5-202ENST00000409292 GAS8-AS1O95177 125 aa4.86□□□□□ -1.63
LSM5-202ENST00000409292 GIPP09681 153 aaPredicted RBP4.86□□□□□ -1.63
LSM5-202ENST00000409292 SUMO4Q6EEV6 95 aa4.86□□□□□ -1.63
LSM5-202ENST00000409292 RNASEKQ6P5S7 137 aaKnown RBP4.86□□□□□ -1.63
LSM5-202ENST00000409292 SMIM15Q7Z3B0 74 aa4.86□□□□□ -1.63
LSM5-202ENST00000409292 SFT2D1Q8WV19 159 aa4.86□□□□□ -1.63
LSM5-202ENST00000409292 TMEM101Q96IK0 257 aa4.86□□□□□ -1.63
LSM5-202ENST00000409292 GVQW2A0A096LPI5 108 aaPredicted RBP4.85□□□□□ -1.63
LSM5-202ENST00000409292 UMAD1C9J7I0 102 aa4.85□□□□□ -1.63
LSM5-202ENST00000409292 TEX46H3BTG2 121 aa4.85□□□□□ -1.63
LSM5-202ENST00000409292 H7C423 109 aa4.85□□□□□ -1.63
LSM5-202ENST00000409292 IFITM3Q01628 133 aa4.85□□□□□ -1.63
LSM5-202ENST00000409292 TMUB2Q71RG4 321 aa4.85□□□□□ -1.63
LSM5-202ENST00000409292 ZNF664Q8N3J9 261 aa4.85□□□□□ -1.63
LSM5-202ENST00000409292 OR2D3Q8NGH3 330 aa4.85□□□□□ -1.63
LSM5-202ENST00000409292 PRSS3P2Q8NHM4 247 aa4.85□□□□□ -1.63
LSM5-202ENST00000409292 CHCHD10Q8WYQ3 142 aaPredicted RBP4.85□□□□□ -1.63
LSM5-202ENST00000409292 ISOC2Q96AB3 205 aa4.85□□□□□ -1.63
LSM5-202ENST00000409292 TRAV26-2A0A0B4J265 109 aa4.84□□□□□ -1.63
LSM5-202ENST00000409292 IGHV1-58A0A0C4DH39 117 aa4.84□□□□□ -1.63
LSM5-202ENST00000409292 NCR2O95944 276 aa4.84□□□□□ -1.63
LSM5-202ENST00000409292 IFNA1P01562 189 aa4.84□□□□□ -1.63
LSM5-202ENST00000409292 APCSP02743 223 aa4.84□□□□□ -1.63
LSM5-202ENST00000409292 KRTAP10-8P60410 259 aa4.84□□□□□ -1.63
LSM5-202ENST00000409292 EIF5AP63241 154 aaKnown RBP4.84□□□□□ -1.63
LSM5-202ENST00000409292 KCNRGQ8N5I3 272 aa4.84□□□□□ -1.63
LSM5-202ENST00000409292 C15orf56Q8N910 161 aa4.84□□□□□ -1.63
LSM5-202ENST00000409292 FAM213BQ8TBF2 198 aa4.84□□□□□ -1.63
LSM5-202ENST00000409292 CARD19Q96LW7 228 aa4.84□□□□□ -1.63
LSM5-202ENST00000409292 MLST8Q9BVC4 326 aa4.84□□□□□ -1.63
LSM5-202ENST00000409292 A0A096LNI7 61 aa4.83□□□□□ -1.64
LSM5-202ENST00000409292 A0A1B0GV50 99 aa4.83□□□□□ -1.64
LSM5-202ENST00000409292 ZNF25P17030 456 aaPredicted RBP4.83□□□□□ -1.64
LSM5-202ENST00000409292 SS18Q15532 418 aa4.83□□□□□ -1.64
LSM5-202ENST00000409292 TEX261Q6UWH6 196 aa4.83□□□□□ -1.64
LSM5-202ENST00000409292 SMIM12Q96EX1 92 aa4.83□□□□□ -1.64
LSM5-202ENST00000409292 LOC107984640A0A0U1RRK4 108 aa4.82□□□□□ -1.64
LSM5-202ENST00000409292 ARPC5O15511 151 aa4.82□□□□□ -1.64
LSM5-202ENST00000409292 MT-ND6P03923 174 aa4.82□□□□□ -1.64
LSM5-202ENST00000409292 MALP21145 153 aa4.82□□□□□ -1.64
LSM5-202ENST00000409292 RPL35P42766 123 aaKnown RBP4.82□□□□□ -1.64
LSM5-202ENST00000409292 XCL1P47992 114 aa4.82□□□□□ -1.64
LSM5-202ENST00000409292 GNG4P50150 75 aa4.82□□□□□ -1.64
LSM5-202ENST00000409292 SYCNQ0VAF6 134 aa4.82□□□□□ -1.64
LSM5-202ENST00000409292 SMAGPQ0VAQ4 97 aa4.82□□□□□ -1.64
LSM5-202ENST00000409292 TWIST1Q15672 202 aa4.82□□□□□ -1.64
LSM5-202ENST00000409292 EIF5AL1Q6IS14 154 aaKnown RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms