RNA–Protein interactions for RNA: ENST00000396684.2

ATN1-202, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-202ENST00000396684 ZNF479Q96JC4 524 aa8.71□□□□□ -1.01
ATN1-202ENST00000396684 NHP2Q9NX24 153 aaKnown RBP8.71□□□□□ -1.01
ATN1-202ENST00000396684 HRNRQ86YZ3 2850 aaPredicted RBP8.71□□□□□ -1.01
ATN1-202ENST00000396684 GYPEP15421 78 aa8.71□□□□□ -1.01
ATN1-202ENST00000396684 ODF1Q14990 250 aa8.71□□□□□ -1.01
ATN1-202ENST00000396684 URB1-AS1Q96HZ7 61 aa8.71□□□□□ -1.01
ATN1-202ENST00000396684 TRAV12-1A0A0B4J245 112 aa8.71□□□□□ -1.02
ATN1-202ENST00000396684 H7C2G1 150 aa8.71□□□□□ -1.02
ATN1-202ENST00000396684 ANKRD39Q53RE8 183 aa8.71□□□□□ -1.02
ATN1-202ENST00000396684 HHLA3Q9XRX5 114 aa8.71□□□□□ -1.02
ATN1-202ENST00000396684 BAALCQ8WXS3 180 aa8.71□□□□□ -1.02
ATN1-202ENST00000396684 CRPP02741 224 aa8.7□□□□□ -1.02
ATN1-202ENST00000396684 FAM110AQ9BQ89 295 aa8.7□□□□□ -1.02
ATN1-202ENST00000396684 LOC107984156A0A0G2JMH3 177 aa8.7□□□□□ -1.02
ATN1-202ENST00000396684 TRBV6-5A0A0K0K1A5 114 aa8.7□□□□□ -1.02
ATN1-202ENST00000396684 TEX48A0A1B0GUV7 120 aa8.7□□□□□ -1.02
ATN1-202ENST00000396684 RBMY1BA6NDE4 496 aaKnown RBP8.7□□□□□ -1.02
ATN1-202ENST00000396684 RBMY1EA6NEQ0 496 aaKnown RBP8.7□□□□□ -1.02
ATN1-202ENST00000396684 APOMO95445 188 aa8.7□□□□□ -1.02
ATN1-202ENST00000396684 RBMY1DP0C7P1 496 aaKnown RBP8.7□□□□□ -1.02
ATN1-202ENST00000396684 ARL17AQ8IVW1 177 aa8.7□□□□□ -1.02
ATN1-202ENST00000396684 TACC2O95359 2948 aa8.7□□□□□ -1.02
ATN1-202ENST00000396684 MALP21145 153 aa8.7□□□□□ -1.02
ATN1-202ENST00000396684 PIK3CD-AS1Q5SR53 167 aa8.7□□□□□ -1.02
ATN1-202ENST00000396684 TEX15Q9BXT5 2789 aa8.69□□□□□ -1.02
ATN1-202ENST00000396684 RS1O15537 224 aa8.69□□□□□ -1.02
ATN1-202ENST00000396684 ATP6V0E2Q8NHE4 81 aa8.69□□□□□ -1.02
ATN1-202ENST00000396684 TRBV27A0A0K0K1C4 114 aa8.69□□□□□ -1.02
ATN1-202ENST00000396684 TMEM238C9JI98 176 aa8.69□□□□□ -1.02
ATN1-202ENST00000396684 CRXO43186 299 aaPredicted RBP8.69□□□□□ -1.02
ATN1-202ENST00000396684 SS18Q15532 418 aa8.68□□□□□ -1.02
ATN1-202ENST00000396684 FAM222AQ5U5X8 452 aa8.68□□□□□ -1.02
ATN1-202ENST00000396684 CFAP161Q6P656 301 aa8.68□□□□□ -1.02
ATN1-202ENST00000396684 C1orf158Q8N1D5 194 aa8.68□□□□□ -1.02
ATN1-202ENST00000396684 MRAPQ8TCY5 172 aa8.68□□□□□ -1.02
ATN1-202ENST00000396684 NXPH4O95158 308 aa8.68□□□□□ -1.02
ATN1-202ENST00000396684 RPL32P62910 135 aaKnown RBP8.68□□□□□ -1.02
ATN1-202ENST00000396684 Q6ZVH6 145 aa8.68□□□□□ -1.02
ATN1-202ENST00000396684 PCP2Q8IVA1 136 aa8.68□□□□□ -1.02
ATN1-202ENST00000396684 UTP20O75691 2785 aaKnown RBP8.68□□□□□ -1.02
ATN1-202ENST00000396684 MYMXA0A1B0GTQ4 84 aa8.68□□□□□ -1.02
ATN1-202ENST00000396684 NEXN-AS1Q8NBZ9 246 aa8.68□□□□□ -1.02
ATN1-202ENST00000396684 CLUHP3Q96NS8 147 aa8.68□□□□□ -1.02
ATN1-202ENST00000396684 CST9LQ9H4G1 147 aa8.68□□□□□ -1.02
ATN1-202ENST00000396684 PRO0255Q9UI72 69 aa8.68□□□□□ -1.02
ATN1-202ENST00000396684 A0A0J9YXV3 536 aa8.67□□□□□ -1.02
ATN1-202ENST00000396684 POLR2KP53803 58 aaKnown RBP8.67□□□□□ -1.02
ATN1-202ENST00000396684 KIR2DL5BQ8NHK3 375 aa8.67□□□□□ -1.02
ATN1-202ENST00000396684 ZFHX4Q86UP3 3567 aa8.67□□□□□ -1.02
ATN1-202ENST00000396684 A0A0U1RRA0 63 aa8.67□□□□□ -1.02
ATN1-202ENST00000396684 FGF6P10767 208 aa8.67□□□□□ -1.02
ATN1-202ENST00000396684 OXLD1Q5BKU9 147 aa8.67□□□□□ -1.02
ATN1-202ENST00000396684 LYRM9A8MSI8 78 aa8.66□□□□□ -1.02
ATN1-202ENST00000396684 J3QQQ9 107 aa8.66□□□□□ -1.02
ATN1-202ENST00000396684 HERVK_113P63121 156 aa8.66□□□□□ -1.02
ATN1-202ENST00000396684 BEAN1Q3B7T3 259 aa8.66□□□□□ -1.02
ATN1-202ENST00000396684 COX6CP09669 75 aa8.66□□□□□ -1.02
ATN1-202ENST00000396684 SLC25A29Q8N8R3 303 aa8.66□□□□□ -1.02
ATN1-202ENST00000396684 H3BUT2 72 aa8.66□□□□□ -1.02
ATN1-202ENST00000396684 MRPL23Q16540 153 aaKnown RBP8.66□□□□□ -1.02
ATN1-202ENST00000396684 OPRPNQ99935 248 aaPredicted RBP8.66□□□□□ -1.02
ATN1-202ENST00000396684 ZMAT4Q9H898 229 aa8.66□□□□□ -1.02
ATN1-202ENST00000396684 RELNP78509 3460 aa8.65□□□□□ -1.02
ATN1-202ENST00000396684 PRIMA1Q86XR5 153 aa8.65□□□□□ -1.02
ATN1-202ENST00000396684 MIFP14174 115 aa8.65□□□□□ -1.02
ATN1-202ENST00000396684 SIVA1O15304 175 aa8.65□□□□□ -1.03
ATN1-202ENST00000396684 RBMY1A1P0DJD3 496 aaKnown RBP8.65□□□□□ -1.03
ATN1-202ENST00000396684 RBMY1CP0DJD4 496 aa8.65□□□□□ -1.03
ATN1-202ENST00000396684 RBMY1FQ15415 496 aaKnown RBP8.65□□□□□ -1.03
ATN1-202ENST00000396684 C11orf86A6NJI1 115 aa8.64□□□□□ -1.03
ATN1-202ENST00000396684 SNCGO76070 127 aa8.64□□□□□ -1.03
ATN1-202ENST00000396684 CEMP1Q6PRD7 247 aaPredicted RBP8.64□□□□□ -1.03
ATN1-202ENST00000396684 ANGP03950 147 aaKnown RBP8.64□□□□□ -1.03
ATN1-202ENST00000396684 C6orf226Q5I0X4 101 aa8.64□□□□□ -1.03
ATN1-202ENST00000396684 ICOSQ9Y6W8 199 aa8.64□□□□□ -1.03
ATN1-202ENST00000396684 UBR5O95071 2799 aaPredicted RBP8.64□□□□□ -1.03
ATN1-202ENST00000396684 TRBV6-4A0A1B0GX49 114 aa8.63□□□□□ -1.03
ATN1-202ENST00000396684 IGHV4-30-4P0DP06 118 aa8.63□□□□□ -1.03
ATN1-202ENST00000396684 RNASE8Q8TDE3 154 aaKnown RBP8.63□□□□□ -1.03
ATN1-202ENST00000396684 NDUFA12Q9UI09 145 aa8.63□□□□□ -1.03
ATN1-202ENST00000396684 SPINK8P0C7L1 97 aa8.63□□□□□ -1.03
ATN1-202ENST00000396684 SH2D6Q7Z4S9 175 aa8.63□□□□□ -1.03
ATN1-202ENST00000396684 LINC00467Q9BRT7 94 aa8.63□□□□□ -1.03
ATN1-202ENST00000396684 TSHBP01222 138 aa8.63□□□□□ -1.03
ATN1-202ENST00000396684 CKS1BP61024 79 aa8.63□□□□□ -1.03
ATN1-202ENST00000396684 ATRQ13535 2644 aa8.63□□□□□ -1.03
ATN1-202ENST00000396684 SFTA2Q6UW10 78 aa8.63□□□□□ -1.03
ATN1-202ENST00000396684 TTTY13Q9BZ97 58 aa8.63□□□□□ -1.03
ATN1-202ENST00000396684 C11orf68Q9H3H3 251 aaKnown RBP8.63□□□□□ -1.03
ATN1-202ENST00000396684 ZNF625Q96I27 306 aaPredicted RBP8.62□□□□□ -1.03
ATN1-202ENST00000396684 PRSS47A8MTI9 375 aa8.62□□□□□ -1.03
ATN1-202ENST00000396684 IGHV4-28A0A0C4DH34 117 aa8.62□□□□□ -1.03
ATN1-202ENST00000396684 LINC00158P58513 81 aa8.62□□□□□ -1.03
ATN1-202ENST00000396684 CLPSL2Q6UWE3 100 aa8.62□□□□□ -1.03
ATN1-202ENST00000396684 KIF25-AS1Q9Y6Z4 181 aa8.62□□□□□ -1.03
ATN1-202ENST00000396684 ITPR2Q14571 2701 aa8.62□□□□□ -1.03
ATN1-202ENST00000396684 Q6ZUT4 128 aa8.61□□□□□ -1.03
ATN1-202ENST00000396684 E9PLD3 99 aa8.61□□□□□ -1.03
ATN1-202ENST00000396684 BOD1L2Q8IYS8 172 aa8.61□□□□□ -1.03
ATN1-202ENST00000396684 SPCS1Q9Y6A9 102 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms