RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 IGHV3-64A0A075B6Q5 118 aa13.49□□□□□ -0.25
PCDHA1-202ENST00000394633 A4D1N5 150 aa13.49□□□□□ -0.25
PCDHA1-202ENST00000394633 SYNJ2BPP57105 145 aa13.49□□□□□ -0.25
PCDHA1-202ENST00000394633 A0A0J9YXV3 536 aa13.48□□□□□ -0.25
PCDHA1-202ENST00000394633 FHL3Q13643 280 aa13.48□□□□□ -0.25
PCDHA1-202ENST00000394633 TEN1Q86WV5 123 aa13.48□□□□□ -0.25
PCDHA1-202ENST00000394633 NF1P21359 2839 aa13.48□□□□□ -0.25
PCDHA1-202ENST00000394633 FSHBP01225 129 aa13.47□□□□□ -0.25
PCDHA1-202ENST00000394633 PPDPFLQ8WWR9 84 aa13.47□□□□□ -0.25
PCDHA1-202ENST00000394633 TMEM89A2RUT3 159 aa13.47□□□□□ -0.25
PCDHA1-202ENST00000394633 CIDEAO60543 219 aa13.47□□□□□ -0.25
PCDHA1-202ENST00000394633 DUX5Q96PT3 197 aa13.47□□□□□ -0.25
PCDHA1-202ENST00000394633 SORL1Q92673 2214 aa13.46□□□□□ -0.25
PCDHA1-202ENST00000394633 TRAV2A0A0B4J234 112 aa13.46□□□□□ -0.25
PCDHA1-202ENST00000394633 RBMY1A1P0DJD3 496 aaKnown RBP13.46□□□□□ -0.25
PCDHA1-202ENST00000394633 RBMY1CP0DJD4 496 aa13.46□□□□□ -0.25
PCDHA1-202ENST00000394633 SCGB1C2P0DMR2 95 aa13.46□□□□□ -0.25
PCDHA1-202ENST00000394633 RBMY1FQ15415 496 aaKnown RBP13.46□□□□□ -0.25
PCDHA1-202ENST00000394633 TMEM263Q8WUH6 116 aaKnown RBP13.46□□□□□ -0.25
PCDHA1-202ENST00000394633 VCX2Q9H322 139 aa13.46□□□□□ -0.25
PCDHA1-202ENST00000394633 TRGV11A0A075B6L2 103 aa13.45□□□□□ -0.26
PCDHA1-202ENST00000394633 IGHV3-33P01772 117 aa13.45□□□□□ -0.26
PCDHA1-202ENST00000394633 RNF152Q8N8N0 203 aa13.45□□□□□ -0.26
PCDHA1-202ENST00000394633 A8MWV9 139 aa13.45□□□□□ -0.26
PCDHA1-202ENST00000394633 MUSTN1Q8IVN3 82 aa13.45□□□□□ -0.26
PCDHA1-202ENST00000394633 RAX2Q96IS3 184 aa13.45□□□□□ -0.26
PCDHA1-202ENST00000394633 FAM104AQ969W3 186 aa13.44□□□□□ -0.26
PCDHA1-202ENST00000394633 NACAE9PAV3 2078 aa13.44□□□□□ -0.26
PCDHA1-202ENST00000394633 KRTAP1-1Q07627 177 aa13.44□□□□□ -0.26
PCDHA1-202ENST00000394633 IGHV3-73A0A0B4J1V6 119 aa13.43□□□□□ -0.26
PCDHA1-202ENST00000394633 A0A0B4J2C4 111 aa13.43□□□□□ -0.26
PCDHA1-202ENST00000394633 M0R2P5 195 aa13.43□□□□□ -0.26
PCDHA1-202ENST00000394633 PROK1P58294 105 aa13.43□□□□□ -0.26
PCDHA1-202ENST00000394633 ANKRD29Q8N6D5 301 aa13.43□□□□□ -0.26
PCDHA1-202ENST00000394633 A0A0J9YXY3 114 aa13.42□□□□□ -0.26
PCDHA1-202ENST00000394633 A0A1B0GV72 72 aa13.42□□□□□ -0.26
PCDHA1-202ENST00000394633 TCTEX1D4Q5JR98 221 aa13.42□□□□□ -0.26
PCDHA1-202ENST00000394633 EDA2RQ9HAV5 297 aa13.42□□□□□ -0.26
PCDHA1-202ENST00000394633 CD28P10747 220 aa13.41□□□□□ -0.26
PCDHA1-202ENST00000394633 HOXD3P31249 432 aaPredicted RBP13.41□□□□□ -0.26
PCDHA1-202ENST00000394633 CRYBA4P53673 196 aa13.41□□□□□ -0.26
PCDHA1-202ENST00000394633 ERG28Q9UKR5 140 aa13.41□□□□□ -0.26
PCDHA1-202ENST00000394633 PYGO1Q9Y3Y4 419 aa13.41□□□□□ -0.26
PCDHA1-202ENST00000394633 KNCNA6PVL3 124 aa13.41□□□□□ -0.26
PCDHA1-202ENST00000394633 MT-ATP8P03928 68 aa13.41□□□□□ -0.26
PCDHA1-202ENST00000394633 IGHV3-30-3P0DP02 117 aa13.41□□□□□ -0.26
PCDHA1-202ENST00000394633 H7C2G1 150 aa13.4□□□□□ -0.26
PCDHA1-202ENST00000394633 HTN1P15515 57 aa13.4□□□□□ -0.26
PCDHA1-202ENST00000394633 XGP55808 180 aa13.4□□□□□ -0.26
PCDHA1-202ENST00000394633 CEMP1Q6PRD7 247 aaPredicted RBP13.4□□□□□ -0.26
PCDHA1-202ENST00000394633 SPXQ9BT56 116 aa13.4□□□□□ -0.26
PCDHA1-202ENST00000394633 Q6ZUT4 128 aa13.4□□□□□ -0.26
PCDHA1-202ENST00000394633 ADARB2-AS1A8MUL3 147 aa13.39□□□□□ -0.27
PCDHA1-202ENST00000394633 SPINK8P0C7L1 97 aa13.39□□□□□ -0.27
PCDHA1-202ENST00000394633 CKS1BP61024 79 aa13.39□□□□□ -0.27
PCDHA1-202ENST00000394633 MRPS36P82909 103 aaKnown RBP13.39□□□□□ -0.27
PCDHA1-202ENST00000394633 TIMM21Q9BVV7 248 aa13.39□□□□□ -0.27
PCDHA1-202ENST00000394633 C9JAW5 83 aa13.39□□□□□ -0.27
PCDHA1-202ENST00000394633 SLC25A20O43772 301 aa13.39□□□□□ -0.27
PCDHA1-202ENST00000394633 PRM2P04554 102 aa13.39□□□□□ -0.27
PCDHA1-202ENST00000394633 TRAV8-3A0A0A6YYJ7 113 aa13.38□□□□□ -0.27
PCDHA1-202ENST00000394633 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.38□□□□□ -0.27
PCDHA1-202ENST00000394633 LITAFQ99732 161 aa13.38□□□□□ -0.27
PCDHA1-202ENST00000394633 Q9UF83 564 aa13.38□□□□□ -0.27
PCDHA1-202ENST00000394633 ELANEP08246 267 aa13.37□□□□□ -0.27
PCDHA1-202ENST00000394633 RNASE13Q5GAN3 156 aaKnown RBP13.37□□□□□ -0.27
PCDHA1-202ENST00000394633 HIVEP1P15822 2718 aa13.37□□□□□ -0.27
PCDHA1-202ENST00000394633 RBMY1BA6NDE4 496 aaKnown RBP13.37□□□□□ -0.27
PCDHA1-202ENST00000394633 RBMY1EA6NEQ0 496 aaKnown RBP13.37□□□□□ -0.27
PCDHA1-202ENST00000394633 RBMY1DP0C7P1 496 aaKnown RBP13.37□□□□□ -0.27
PCDHA1-202ENST00000394633 SMR3AQ99954 134 aa13.37□□□□□ -0.27
PCDHA1-202ENST00000394633 SETXQ7Z333 2677 aaKnown RBP13.37□□□□□ -0.27
PCDHA1-202ENST00000394633 DEFB131AP59861 70 aa13.36□□□□□ -0.27
PCDHA1-202ENST00000394633 UBE2E2Q96LR5 201 aa13.36□□□□□ -0.27
PCDHA1-202ENST00000394633 ZNF702PQ9H963 129 aa13.36□□□□□ -0.27
PCDHA1-202ENST00000394633 TNFRSF18Q9Y5U5 241 aa13.36□□□□□ -0.27
PCDHA1-202ENST00000394633 M0QXV9 152 aa13.36□□□□□ -0.27
PCDHA1-202ENST00000394633 Q6ZSN1 163 aa13.36□□□□□ -0.27
PCDHA1-202ENST00000394633 A8MTW9 85 aa13.35□□□□□ -0.27
PCDHA1-202ENST00000394633 Q1RN00 199 aa13.35□□□□□ -0.27
PCDHA1-202ENST00000394633 Q6YL49 198 aa13.35□□□□□ -0.27
PCDHA1-202ENST00000394633 VPREB3Q9UKI3 123 aa13.35□□□□□ -0.27
PCDHA1-202ENST00000394633 IGHV1-58A0A0C4DH39 117 aa13.35□□□□□ -0.27
PCDHA1-202ENST00000394633 DUX3Q96PT4 197 aa13.35□□□□□ -0.27
PCDHA1-202ENST00000394633 CHCHD7Q9BUK0 85 aa13.35□□□□□ -0.27
PCDHA1-202ENST00000394633 HIVEP2P31629 2446 aa13.34□□□□□ -0.27
PCDHA1-202ENST00000394633 H3BMM0 161 aa13.34□□□□□ -0.27
PCDHA1-202ENST00000394633 SLURP1P55000 103 aa13.34□□□□□ -0.27
PCDHA1-202ENST00000394633 C18orf65Q6ZTR6 163 aa13.34□□□□□ -0.27
PCDHA1-202ENST00000394633 BAHCC1Q9P281 2608 aa13.33□□□□□ -0.27
PCDHA1-202ENST00000394633 DEFB136Q30KP8 78 aa13.33□□□□□ -0.27
PCDHA1-202ENST00000394633 ADAMTSL4-AS1Q5T5F5 129 aa13.33□□□□□ -0.27
PCDHA1-202ENST00000394633 SETD2Q9BYW2 2564 aaPredicted RBP13.33□□□□□ -0.28
PCDHA1-202ENST00000394633 UBE2D4Q9Y2X8 147 aa13.33□□□□□ -0.28
PCDHA1-202ENST00000394633 NDUFA12Q9UI09 145 aa13.32□□□□□ -0.28
PCDHA1-202ENST00000394633 NSD1Q96L73 2696 aaPredicted RBP13.32□□□□□ -0.28
PCDHA1-202ENST00000394633 TINCRA0A1B0GVN0 87 aa13.32□□□□□ -0.28
PCDHA1-202ENST00000394633 A8MZ25 164 aa13.32□□□□□ -0.28
PCDHA1-202ENST00000394633 TRIAP1O43715 76 aa13.32□□□□□ -0.28
PCDHA1-202ENST00000394633 ATXN8Q156A1 80 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms