RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 PRO0461Q9UI25 63 aa10.79□□□□□ -0.68
MKS1-202ENST00000393119 A0A1B0GV72 72 aa10.78□□□□□ -0.68
MKS1-202ENST00000393119 FCER1GP30273 86 aa10.78□□□□□ -0.68
MKS1-202ENST00000393119 SMAGPQ0VAQ4 97 aa10.78□□□□□ -0.68
MKS1-202ENST00000393119 LAGE3Q14657 143 aa10.78□□□□□ -0.68
MKS1-202ENST00000393119 OXLD1Q5BKU9 147 aa10.78□□□□□ -0.68
MKS1-202ENST00000393119 Q6ZTI0 123 aa10.78□□□□□ -0.68
MKS1-202ENST00000393119 CEND1Q8N111 149 aa10.78□□□□□ -0.68
MKS1-202ENST00000393119 TTTY13Q9BZ97 58 aa10.78□□□□□ -0.68
MKS1-202ENST00000393119 TRGV1A0A0A0MS02 117 aa10.77□□□□□ -0.68
MKS1-202ENST00000393119 TMEM238LA0A1B0GVL6 79 aa10.77□□□□□ -0.68
MKS1-202ENST00000393119 PRSS47A8MTI9 375 aa10.77□□□□□ -0.68
MKS1-202ENST00000393119 IGLL5B9A064 214 aa10.77□□□□□ -0.68
MKS1-202ENST00000393119 EMP1P54849 157 aa10.77□□□□□ -0.68
MKS1-202ENST00000393119 WFDC2Q14508 124 aa10.77□□□□□ -0.68
MKS1-202ENST00000393119 C9orf66Q5T8R8 295 aa10.77□□□□□ -0.68
MKS1-202ENST00000393119 CFAP126Q5VTH2 177 aa10.77□□□□□ -0.68
MKS1-202ENST00000393119 NOP10Q9NPE3 64 aaKnown RBP10.77□□□□□ -0.68
MKS1-202ENST00000393119 NACAE9PAV3 2078 aa10.77□□□□□ -0.69
MKS1-202ENST00000393119 SDHAF1A6NFY7 115 aa10.76□□□□□ -0.69
MKS1-202ENST00000393119 PLAC8L1A1L4L8 177 aa10.76□□□□□ -0.69
MKS1-202ENST00000393119 GTSCR1Q86UQ5 136 aa10.76□□□□□ -0.69
MKS1-202ENST00000393119 POLR2KP53803 58 aaKnown RBP10.75□□□□□ -0.69
MKS1-202ENST00000393119 TAL2Q16559 108 aa10.75□□□□□ -0.69
MKS1-202ENST00000393119 ZNF479Q96JC4 524 aa10.75□□□□□ -0.69
MKS1-202ENST00000393119 A0A1B0GWB2 263 aa10.75□□□□□ -0.69
MKS1-202ENST00000393119 RPL39P62891 51 aaKnown RBP10.75□□□□□ -0.69
MKS1-202ENST00000393119 ZC2HC1BQ5TFG8 222 aa10.75□□□□□ -0.69
MKS1-202ENST00000393119 FAM110AQ9BQ89 295 aa10.75□□□□□ -0.69
MKS1-202ENST00000393119 C20orf78Q9BR46 151 aa10.75□□□□□ -0.69
MKS1-202ENST00000393119 IGKCP01834 107 aa10.74□□□□□ -0.69
MKS1-202ENST00000393119 NHP2Q9NX24 153 aaKnown RBP10.74□□□□□ -0.69
MKS1-202ENST00000393119 J3QR89 54 aa10.74□□□□□ -0.69
MKS1-202ENST00000393119 CMC4P56277 68 aaPredicted RBP10.74□□□□□ -0.69
MKS1-202ENST00000393119 LINC00467Q9BRT7 94 aa10.74□□□□□ -0.69
MKS1-202ENST00000393119 IL17DQ8TAD2 202 aa10.73□□□□□ -0.69
MKS1-202ENST00000393119 IGHV3-38A0A0C4DH36 116 aa10.73□□□□□ -0.69
MKS1-202ENST00000393119 DEFB4AO15263 64 aa10.73□□□□□ -0.69
MKS1-202ENST00000393119 C3orf56Q8N813 242 aa10.73□□□□□ -0.69
MKS1-202ENST00000393119 WFDC9Q8NEX5 89 aa10.73□□□□□ -0.69
MKS1-202ENST00000393119 PRSS1P07477 247 aa10.72□□□□□ -0.69
MKS1-202ENST00000393119 INSL3P51460 131 aa10.72□□□□□ -0.69
MKS1-202ENST00000393119 C12orf74Q32Q52 190 aa10.72□□□□□ -0.69
MKS1-202ENST00000393119 MAPKAPK5-AS1Q8N8E1 139 aa10.72□□□□□ -0.69
MKS1-202ENST00000393119 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.72□□□□□ -0.69
MKS1-202ENST00000393119 ATP5LO75964 103 aa10.72□□□□□ -0.69
MKS1-202ENST00000393119 GAGE7O76087 117 aa10.72□□□□□ -0.69
MKS1-202ENST00000393119 DPM2O94777 84 aa10.72□□□□□ -0.69
MKS1-202ENST00000393119 GAGE12FP0CL80 117 aa10.72□□□□□ -0.69
MKS1-202ENST00000393119 GAGE12GP0CL81 117 aa10.72□□□□□ -0.69
MKS1-202ENST00000393119 GAGE12IP0CL82 117 aa10.72□□□□□ -0.69
MKS1-202ENST00000393119 SH2D6Q7Z4S9 175 aa10.72□□□□□ -0.69
MKS1-202ENST00000393119 TMEM263Q8WUH6 116 aaKnown RBP10.72□□□□□ -0.69
MKS1-202ENST00000393119 TRBV7-3A0A075B6L6 115 aa10.71□□□□□ -0.69
MKS1-202ENST00000393119 H3BMG7 143 aa10.71□□□□□ -0.69
MKS1-202ENST00000393119 ETDBQ3ZM63 59 aa10.71□□□□□ -0.69
MKS1-202ENST00000393119 C2orf66Q6UXQ4 117 aa10.71□□□□□ -0.69
MKS1-202ENST00000393119 ZFP2Q6ZN57 461 aa10.71□□□□□ -0.69
MKS1-202ENST00000393119 A8MWV9 139 aa10.7□□□□□ -0.7
MKS1-202ENST00000393119 KRTAP10-11P60412 298 aa10.7□□□□□ -0.7
MKS1-202ENST00000393119 OPRPNQ99935 248 aaPredicted RBP10.7□□□□□ -0.7
MKS1-202ENST00000393119 RRN3P1Q2M238 152 aa10.7□□□□□ -0.7
MKS1-202ENST00000393119 DEFB135Q30KP9 77 aa10.7□□□□□ -0.7
MKS1-202ENST00000393119 SPXQ9BT56 116 aa10.7□□□□□ -0.7
MKS1-202ENST00000393119 K7EMI3 77 aa10.69□□□□□ -0.7
MKS1-202ENST00000393119 RS1O15537 224 aa10.69□□□□□ -0.7
MKS1-202ENST00000393119 VCYO14598 125 aa10.69□□□□□ -0.7
MKS1-202ENST00000393119 NEXN-AS1Q8NBZ9 246 aa10.69□□□□□ -0.7
MKS1-202ENST00000393119 TP53TG1Q9Y2A0 90 aa10.69□□□□□ -0.7
MKS1-202ENST00000393119 TRBV27A0A0K0K1C4 114 aa10.68□□□□□ -0.7
MKS1-202ENST00000393119 TSHBP01222 138 aa10.68□□□□□ -0.7
MKS1-202ENST00000393119 TOMM6Q96B49 74 aa10.68□□□□□ -0.7
MKS1-202ENST00000393119 SCGB3A1Q96QR1 104 aa10.68□□□□□ -0.7
MKS1-202ENST00000393119 TRBV6-5A0A0K0K1A5 114 aa10.68□□□□□ -0.7
MKS1-202ENST00000393119 CKS1BP61024 79 aa10.68□□□□□ -0.7
MKS1-202ENST00000393119 GAGE13Q4V321 117 aa10.68□□□□□ -0.7
MKS1-202ENST00000393119 ORMDL2Q53FV1 153 aa10.68□□□□□ -0.7
MKS1-202ENST00000393119 NOTCH1P46531 2555 aa10.67□□□□□ -0.7
MKS1-202ENST00000393119 LOC100131303A0A0U1RQF7 123 aa10.67□□□□□ -0.7
MKS1-202ENST00000393119 ATP6V0E2Q8NHE4 81 aa10.67□□□□□ -0.7
MKS1-202ENST00000393119 C1QTNF4Q9BXJ3 329 aa10.67□□□□□ -0.7
MKS1-202ENST00000393119 MRPL35Q9NZE8 188 aaKnown RBP10.67□□□□□ -0.7
MKS1-202ENST00000393119 X6R8D5 127 aa10.67□□□□□ -0.7
MKS1-202ENST00000393119 DEFB130BP0DP73 79 aa10.67□□□□□ -0.7
MKS1-202ENST00000393119 DEFB130AP0DP74 79 aa10.67□□□□□ -0.7
MKS1-202ENST00000393119 CEMP1Q6PRD7 247 aaPredicted RBP10.67□□□□□ -0.7
MKS1-202ENST00000393119 KIR2DL4Q99706 377 aa10.67□□□□□ -0.7
MKS1-202ENST00000393119 CDIP1Q9H305 208 aa10.67□□□□□ -0.7
MKS1-202ENST00000393119 PPP1R17O96001 155 aa10.66□□□□□ -0.7
MKS1-202ENST00000393119 TRGV2A0A075B6R0 118 aa10.66□□□□□ -0.7
MKS1-202ENST00000393119 A0A087WX48 190 aa10.66□□□□□ -0.7
MKS1-202ENST00000393119 IGHV4-30-4P0DP06 118 aa10.66□□□□□ -0.7
MKS1-202ENST00000393119 SMCPP49901 116 aaPredicted RBP10.66□□□□□ -0.7
MKS1-202ENST00000393119 C16orf74Q96GX8 76 aa10.66□□□□□ -0.7
MKS1-202ENST00000393119 TNFRSF18Q9Y5U5 241 aa10.66□□□□□ -0.7
MKS1-202ENST00000393119 DAZ2Q13117 558 aaKnown RBP10.65□□□□□ -0.71
MKS1-202ENST00000393119 SLC25A29Q8N8R3 303 aa10.65□□□□□ -0.71
MKS1-202ENST00000393119 ZNRF2Q8NHG8 242 aa10.65□□□□□ -0.71
MKS1-202ENST00000393119 BAALCQ8WXS3 180 aa10.65□□□□□ -0.71
MKS1-202ENST00000393119 PTH2Q96A98 100 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms