RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 TRAV10A0A0B4J240 114 aa7.66□□□□□ -1.18
HLA-DQA1-202ENST00000374949 TRBV10-1A0A0K0K1A3 114 aa7.66□□□□□ -1.18
HLA-DQA1-202ENST00000374949 SDHAF1A6NFY7 115 aa7.66□□□□□ -1.18
HLA-DQA1-202ENST00000374949 PRSS29PA6NIE9 313 aa7.66□□□□□ -1.18
HLA-DQA1-202ENST00000374949 K7EMI3 77 aa7.66□□□□□ -1.18
HLA-DQA1-202ENST00000374949 K7EQD1 137 aa7.66□□□□□ -1.18
HLA-DQA1-202ENST00000374949 RTL8CO15255 209 aa7.66□□□□□ -1.18
HLA-DQA1-202ENST00000374949 P0DMU3 169 aa7.66□□□□□ -1.18
HLA-DQA1-202ENST00000374949 FAM231AP0DMU4 169 aa7.66□□□□□ -1.18
HLA-DQA1-202ENST00000374949 FAM231CP0DMU5 169 aa7.66□□□□□ -1.18
HLA-DQA1-202ENST00000374949 AMTP48728 403 aa7.66□□□□□ -1.18
HLA-DQA1-202ENST00000374949 LAGE3Q14657 143 aa7.66□□□□□ -1.18
HLA-DQA1-202ENST00000374949 SLC25A29Q8N8R3 303 aa7.66□□□□□ -1.18
HLA-DQA1-202ENST00000374949 NEXN-AS1Q8NBZ9 246 aa7.66□□□□□ -1.18
HLA-DQA1-202ENST00000374949 TMEM70Q9BUB7 260 aa7.66□□□□□ -1.18
HLA-DQA1-202ENST00000374949 CELA1Q9UNI1 258 aa7.66□□□□□ -1.18
HLA-DQA1-202ENST00000374949 HHLA3Q9XRX5 114 aa7.66□□□□□ -1.18
HLA-DQA1-202ENST00000374949 IGHV1-24A0A0C4DH33 117 aa7.65□□□□□ -1.18
HLA-DQA1-202ENST00000374949 TRBV27A0A0K0K1C4 114 aa7.65□□□□□ -1.18
HLA-DQA1-202ENST00000374949 I3L3M4 83 aa7.65□□□□□ -1.18
HLA-DQA1-202ENST00000374949 M0R2N4 97 aa7.65□□□□□ -1.18
HLA-DQA1-202ENST00000374949 TCAPO15273 167 aa7.65□□□□□ -1.18
HLA-DQA1-202ENST00000374949 RPL36AP83881 106 aaKnown RBP7.65□□□□□ -1.18
HLA-DQA1-202ENST00000374949 ORMDL2Q53FV1 153 aa7.65□□□□□ -1.18
HLA-DQA1-202ENST00000374949 RPL36ALQ969Q0 106 aaKnown RBP7.65□□□□□ -1.18
HLA-DQA1-202ENST00000374949 KIR2DL4Q99706 377 aa7.65□□□□□ -1.18
HLA-DQA1-202ENST00000374949 PRADC1Q9BSG0 188 aa7.65□□□□□ -1.18
HLA-DQA1-202ENST00000374949 DYNC1H1Q14204 4646 aaKnown RBP7.65□□□□□ -1.19
HLA-DQA1-202ENST00000374949 DNAH17Q9UFH2 4485 aa7.64□□□□□ -1.19
HLA-DQA1-202ENST00000374949 ATP5G1P05496 136 aa7.64□□□□□ -1.19
HLA-DQA1-202ENST00000374949 G0S2P27469 103 aa7.64□□□□□ -1.19
HLA-DQA1-202ENST00000374949 FCER1GP30273 86 aa7.64□□□□□ -1.19
HLA-DQA1-202ENST00000374949 AKR1D1P51857 326 aa7.64□□□□□ -1.19
HLA-DQA1-202ENST00000374949 RHOHQ15669 191 aa7.64□□□□□ -1.19
HLA-DQA1-202ENST00000374949 PMCHL1Q16048 86 aa7.64□□□□□ -1.19
HLA-DQA1-202ENST00000374949 OR10D4PQ8NGN7 298 aa7.64□□□□□ -1.19
HLA-DQA1-202ENST00000374949 ZNRF2Q8NHG8 242 aa7.64□□□□□ -1.19
HLA-DQA1-202ENST00000374949 KRTAP4-5Q9BYR2 181 aa7.64□□□□□ -1.19
HLA-DQA1-202ENST00000374949 Q9UF83 564 aa7.64□□□□□ -1.19
HLA-DQA1-202ENST00000374949 TRBV7-3A0A075B6L6 115 aa7.63□□□□□ -1.19
HLA-DQA1-202ENST00000374949 DEFB131BA0A096LNP1 70 aa7.63□□□□□ -1.19
HLA-DQA1-202ENST00000374949 NUDT3O95989 172 aa7.63□□□□□ -1.19
HLA-DQA1-202ENST00000374949 C12orf74Q32Q52 190 aa7.63□□□□□ -1.19
HLA-DQA1-202ENST00000374949 NEGR1Q7Z3B1 354 aa7.63□□□□□ -1.19
HLA-DQA1-202ENST00000374949 PRO0255Q9UI72 69 aa7.63□□□□□ -1.19
HLA-DQA1-202ENST00000374949 GAGE12JA6NER3 117 aa7.62□□□□□ -1.19
HLA-DQA1-202ENST00000374949 LEPROTL1O95214 131 aa7.62□□□□□ -1.19
HLA-DQA1-202ENST00000374949 HBDP02042 147 aa7.62□□□□□ -1.19
HLA-DQA1-202ENST00000374949 CRYBA4P53673 196 aa7.62□□□□□ -1.19
HLA-DQA1-202ENST00000374949 GAGE1Q13065 139 aa7.62□□□□□ -1.19
HLA-DQA1-202ENST00000374949 GAGE4Q13068 117 aa7.62□□□□□ -1.19
HLA-DQA1-202ENST00000374949 GAGE5Q13069 117 aa7.62□□□□□ -1.19
HLA-DQA1-202ENST00000374949 GAGE13Q4V321 117 aa7.62□□□□□ -1.19
HLA-DQA1-202ENST00000374949 HSPB8Q9UJY1 196 aa7.62□□□□□ -1.19
HLA-DQA1-202ENST00000374949 NACAE9PAV3 2078 aa7.62□□□□□ -1.19
HLA-DQA1-202ENST00000374949 A0A096LNJ9 63 aa7.61□□□□□ -1.19
HLA-DQA1-202ENST00000374949 F5H768 121 aa7.61□□□□□ -1.19
HLA-DQA1-202ENST00000374949 PAX4O43316 350 aa7.61□□□□□ -1.19
HLA-DQA1-202ENST00000374949 TSHBP01222 138 aa7.61□□□□□ -1.19
HLA-DQA1-202ENST00000374949 BTF3P20290 206 aaKnown RBP7.61□□□□□ -1.19
HLA-DQA1-202ENST00000374949 UBE2D3P61077 147 aa7.61□□□□□ -1.19
HLA-DQA1-202ENST00000374949 UBE2D2P62837 147 aa7.61□□□□□ -1.19
HLA-DQA1-202ENST00000374949 DAZ4Q86SG3 579 aaKnown RBP7.61□□□□□ -1.19
HLA-DQA1-202ENST00000374949 DAZ3Q9NR90 486 aaKnown RBP7.61□□□□□ -1.19
HLA-DQA1-202ENST00000374949 PKD1P98161 4303 aa7.61□□□□□ -1.19
HLA-DQA1-202ENST00000374949 LINC01549A6NIU2 74 aa7.6□□□□□ -1.19
HLA-DQA1-202ENST00000374949 HTN3P15516 51 aa7.6□□□□□ -1.19
HLA-DQA1-202ENST00000374949 COTL1Q14019 142 aa7.6□□□□□ -1.19
HLA-DQA1-202ENST00000374949 DEFB104AQ8WTQ1 72 aa7.6□□□□□ -1.19
HLA-DQA1-202ENST00000374949 TOMM6Q96B49 74 aa7.6□□□□□ -1.19
HLA-DQA1-202ENST00000374949 IGHV3-38A0A0C4DH36 116 aa7.59□□□□□ -1.19
HLA-DQA1-202ENST00000374949 LOC100131303A0A0U1RQF7 123 aa7.59□□□□□ -1.19
HLA-DQA1-202ENST00000374949 GYPEP15421 78 aa7.59□□□□□ -1.19
HLA-DQA1-202ENST00000374949 KRTDAPP60985 99 aa7.59□□□□□ -1.19
HLA-DQA1-202ENST00000374949 MAP1LC3CQ9BXW4 147 aa7.59□□□□□ -1.19
HLA-DQA1-202ENST00000374949 C3orf79P0CE67 100 aa7.58□□□□□ -1.2
HLA-DQA1-202ENST00000374949 C2orf66Q6UXQ4 117 aa7.58□□□□□ -1.2
HLA-DQA1-202ENST00000374949 LINC00173Q6ZV60 143 aa7.58□□□□□ -1.2
HLA-DQA1-202ENST00000374949 UBE2DNLQ8IWF7 75 aa7.58□□□□□ -1.2
HLA-DQA1-202ENST00000374949 VSIG2Q96IQ7 327 aa7.58□□□□□ -1.2
HLA-DQA1-202ENST00000374949 SCGB3A1Q96QR1 104 aa7.58□□□□□ -1.2
HLA-DQA1-202ENST00000374949 GTSF1LQ9H1H1 148 aa7.58□□□□□ -1.2
HLA-DQA1-202ENST00000374949 CYSLTR1Q9Y271 337 aa7.58□□□□□ -1.2
HLA-DQA1-202ENST00000374949 TRAV26-1A0A087WT03 109 aa7.57□□□□□ -1.2
HLA-DQA1-202ENST00000374949 A0A0J9YY99 117 aa7.57□□□□□ -1.2
HLA-DQA1-202ENST00000374949 ATP5LO75964 103 aa7.57□□□□□ -1.2
HLA-DQA1-202ENST00000374949 LINC00694P0DN24 101 aa7.57□□□□□ -1.2
HLA-DQA1-202ENST00000374949 TMEM97Q5BJF2 176 aa7.57□□□□□ -1.2
HLA-DQA1-202ENST00000374949 Q6ZR54 194 aa7.57□□□□□ -1.2
HLA-DQA1-202ENST00000374949 C20orf203Q8NBC4 194 aa7.57□□□□□ -1.2
HLA-DQA1-202ENST00000374949 ATP6V0E2Q8NHE4 81 aa7.57□□□□□ -1.2
HLA-DQA1-202ENST00000374949 IFI27L1Q96BM0 104 aa7.57□□□□□ -1.2
HLA-DQA1-202ENST00000374949 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.56□□□□□ -1.2
HLA-DQA1-202ENST00000374949 SYS1-DBNDD2H3BUS1 97 aa7.56□□□□□ -1.2
HLA-DQA1-202ENST00000374949 SCGB1D1O95968 90 aa7.56□□□□□ -1.2
HLA-DQA1-202ENST00000374949 JOSD1Q15040 202 aaPredicted RBP7.56□□□□□ -1.2
HLA-DQA1-202ENST00000374949 MRPL23Q16540 153 aaKnown RBP7.56□□□□□ -1.2
HLA-DQA1-202ENST00000374949 PET117Q6UWS5 81 aa7.56□□□□□ -1.2
HLA-DQA1-202ENST00000374949 ERASQ7Z444 233 aa7.56□□□□□ -1.2
HLA-DQA1-202ENST00000374949 CHCHD7Q9BUK0 85 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms