RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 COTL1Q14019 142 aa11.98□□□□□ -0.49
HLA-DMA-201ENST00000374843 MRPL23Q16540 153 aaKnown RBP11.98□□□□□ -0.49
HLA-DMA-201ENST00000374843 PHLDA1Q8WV24 401 aaPredicted RBP11.98□□□□□ -0.49
HLA-DMA-201ENST00000374843 GTSF1LQ9H1H1 148 aa11.98□□□□□ -0.49
HLA-DMA-201ENST00000374843 A0A096LPF7 62 aa11.97□□□□□ -0.49
HLA-DMA-201ENST00000374843 IGHV3-38A0A0C4DH36 116 aa11.97□□□□□ -0.49
HLA-DMA-201ENST00000374843 FCER1GP30273 86 aa11.97□□□□□ -0.49
HLA-DMA-201ENST00000374843 TMEM97Q5BJF2 176 aa11.97□□□□□ -0.49
HLA-DMA-201ENST00000374843 IFITM10A6NMD0 228 aa11.96□□□□□ -0.49
HLA-DMA-201ENST00000374843 HBDP02042 147 aa11.96□□□□□ -0.49
HLA-DMA-201ENST00000374843 AMTP48728 403 aa11.96□□□□□ -0.49
HLA-DMA-201ENST00000374843 ATP6V0E2Q8NHE4 81 aa11.96□□□□□ -0.49
HLA-DMA-201ENST00000374843 TIRAPP58753 221 aa11.95□□□□□ -0.5
HLA-DMA-201ENST00000374843 NTM-AS1Q6ZSK4 140 aa11.95□□□□□ -0.5
HLA-DMA-201ENST00000374843 NUDT3O95989 172 aa11.94□□□□□ -0.5
HLA-DMA-201ENST00000374843 G0S2P27469 103 aa11.94□□□□□ -0.5
HLA-DMA-201ENST00000374843 PMCHL1Q16048 86 aa11.94□□□□□ -0.5
HLA-DMA-201ENST00000374843 PDZD11Q5EBL8 140 aa11.94□□□□□ -0.5
HLA-DMA-201ENST00000374843 FAM19A2Q8N3H0 131 aa11.94□□□□□ -0.5
HLA-DMA-201ENST00000374843 C15orf53Q8NAA6 179 aa11.94□□□□□ -0.5
HLA-DMA-201ENST00000374843 HIST1H2BLQ99880 126 aa11.94□□□□□ -0.5
HLA-DMA-201ENST00000374843 CHCHD7Q9BUK0 85 aa11.94□□□□□ -0.5
HLA-DMA-201ENST00000374843 LINC01549A6NIU2 74 aa11.93□□□□□ -0.5
HLA-DMA-201ENST00000374843 C20orf203Q8NBC4 194 aa11.93□□□□□ -0.5
HLA-DMA-201ENST00000374843 TMEM18Q96B42 140 aa11.93□□□□□ -0.5
HLA-DMA-201ENST00000374843 TRBV6-8A0A0A6YYG3 113 aa11.92□□□□□ -0.5
HLA-DMA-201ENST00000374843 S100A2P29034 98 aa11.92□□□□□ -0.5
HLA-DMA-201ENST00000374843 TOMM6Q96B49 74 aa11.92□□□□□ -0.5
HLA-DMA-201ENST00000374843 CYSLTR1Q9Y271 337 aa11.92□□□□□ -0.5
HLA-DMA-201ENST00000374843 C2orf66Q6UXQ4 117 aa11.91□□□□□ -0.5
HLA-DMA-201ENST00000374843 DEFB104AQ8WTQ1 72 aa11.91□□□□□ -0.5
HLA-DMA-201ENST00000374843 TRBV25-1A0A075B6N4 114 aa11.9□□□□□ -0.5
HLA-DMA-201ENST00000374843 BTF3P20290 206 aaKnown RBP11.9□□□□□ -0.5
HLA-DMA-201ENST00000374843 TMEM243Q9BU79 118 aa11.9□□□□□ -0.5
HLA-DMA-201ENST00000374843 NUPR2A6NF83 97 aa11.89□□□□□ -0.51
HLA-DMA-201ENST00000374843 CEMP1Q6PRD7 247 aaPredicted RBP11.89□□□□□ -0.51
HLA-DMA-201ENST00000374843 H7C423 109 aa11.88□□□□□ -0.51
HLA-DMA-201ENST00000374843 LEPROTL1O95214 131 aa11.88□□□□□ -0.51
HLA-DMA-201ENST00000374843 FABP4P15090 132 aa11.88□□□□□ -0.51
HLA-DMA-201ENST00000374843 RPL39P62891 51 aaKnown RBP11.88□□□□□ -0.51
HLA-DMA-201ENST00000374843 LELP1Q5T871 98 aa11.88□□□□□ -0.51
HLA-DMA-201ENST00000374843 HSPB8Q9UJY1 196 aa11.88□□□□□ -0.51
HLA-DMA-201ENST00000374843 LYPD5Q6UWN5 251 aa11.87□□□□□ -0.51
HLA-DMA-201ENST00000374843 MRPL52Q86TS9 123 aaKnown RBP11.87□□□□□ -0.51
HLA-DMA-201ENST00000374843 TIMM17AQ99595 171 aa11.87□□□□□ -0.51
HLA-DMA-201ENST00000374843 TIMM21Q9BVV7 248 aa11.87□□□□□ -0.51
HLA-DMA-201ENST00000374843 PYGO1Q9Y3Y4 419 aa11.87□□□□□ -0.51
HLA-DMA-201ENST00000374843 STARD9Q9P2P6 4700 aa11.86□□□□□ -0.51
HLA-DMA-201ENST00000374843 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.86□□□□□ -0.51
HLA-DMA-201ENST00000374843 IGKV2-29A2NJV5 120 aaPredicted RBP11.86□□□□□ -0.51
HLA-DMA-201ENST00000374843 IGIPA6NJ69 53 aa11.86□□□□□ -0.51
HLA-DMA-201ENST00000374843 IGLL5B9A064 214 aa11.86□□□□□ -0.51
HLA-DMA-201ENST00000374843 ATP5LO75964 103 aa11.86□□□□□ -0.51
HLA-DMA-201ENST00000374843 NPSP0C0P6 89 aa11.86□□□□□ -0.51
HLA-DMA-201ENST00000374843 LINC00173Q6ZV60 143 aa11.86□□□□□ -0.51
HLA-DMA-201ENST00000374843 SPANXA1Q9NS26 97 aa11.86□□□□□ -0.51
HLA-DMA-201ENST00000374843 PLECQ15149 4684 aaKnown RBP11.86□□□□□ -0.51
HLA-DMA-201ENST00000374843 LOC105371267A0A1B0GV96 52 aa11.85□□□□□ -0.51
HLA-DMA-201ENST00000374843 ERASQ7Z444 233 aa11.85□□□□□ -0.51
HLA-DMA-201ENST00000374843 TMEM141Q96I45 108 aa11.85□□□□□ -0.51
HLA-DMA-201ENST00000374843 UBE2D4Q9Y2X8 147 aa11.85□□□□□ -0.51
HLA-DMA-201ENST00000374843 CSMD3Q7Z407 3707 aa11.85□□□□□ -0.51
HLA-DMA-201ENST00000374843 TCTAP57738 103 aa11.84□□□□□ -0.51
HLA-DMA-201ENST00000374843 SMAGPQ0VAQ4 97 aa11.84□□□□□ -0.51
HLA-DMA-201ENST00000374843 SCGB3A1Q96QR1 104 aa11.84□□□□□ -0.51
HLA-DMA-201ENST00000374843 KLK5Q9Y337 293 aaPredicted RBP11.84□□□□□ -0.51
HLA-DMA-201ENST00000374843 CSDC2Q9Y534 153 aaKnown RBP11.84□□□□□ -0.51
HLA-DMA-201ENST00000374843 FGF6P10767 208 aa11.83□□□□□ -0.52
HLA-DMA-201ENST00000374843 ZNF25P17030 456 aaPredicted RBP11.83□□□□□ -0.52
HLA-DMA-201ENST00000374843 PKIAP61925 76 aa11.83□□□□□ -0.52
HLA-DMA-201ENST00000374843 ESRGQ1W209 222 aa11.83□□□□□ -0.52
HLA-DMA-201ENST00000374843 IFI27L1Q96BM0 104 aa11.83□□□□□ -0.52
HLA-DMA-201ENST00000374843 CHCHD5Q9BSY4 110 aa11.83□□□□□ -0.52
HLA-DMA-201ENST00000374843 UBE2L6O14933 153 aa11.82□□□□□ -0.52
HLA-DMA-201ENST00000374843 MRPS36P82909 103 aaKnown RBP11.82□□□□□ -0.52
HLA-DMA-201ENST00000374843 OR10D4PQ8NGN7 298 aa11.82□□□□□ -0.52
HLA-DMA-201ENST00000374843 FAM104AQ969W3 186 aa11.82□□□□□ -0.52
HLA-DMA-201ENST00000374843 WWC2-AS2Q96NR7 200 aa11.82□□□□□ -0.52
HLA-DMA-201ENST00000374843 APLNQ9ULZ1 77 aa11.82□□□□□ -0.52
HLA-DMA-201ENST00000374843 TGP01266 2768 aa11.81□□□□□ -0.52
HLA-DMA-201ENST00000374843 IGLV4-3A0A075B6K6 122 aa11.81□□□□□ -0.52
HLA-DMA-201ENST00000374843 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.81□□□□□ -0.52
HLA-DMA-201ENST00000374843 C3orf79P0CE67 100 aa11.81□□□□□ -0.52
HLA-DMA-201ENST00000374843 GAGE6Q13070 117 aa11.81□□□□□ -0.52
HLA-DMA-201ENST00000374843 SPATA12Q7Z6I5 190 aa11.8□□□□□ -0.52
HLA-DMA-201ENST00000374843 MUC7Q8TAX7 377 aa11.8□□□□□ -0.52
HLA-DMA-201ENST00000374843 MAP1LC3CQ9BXW4 147 aa11.8□□□□□ -0.52
HLA-DMA-201ENST00000374843 MRPS16Q9Y3D3 137 aaKnown RBP11.8□□□□□ -0.52
HLA-DMA-201ENST00000374843 TRAV8-6A0A0B4J262 113 aa11.79□□□□□ -0.52
HLA-DMA-201ENST00000374843 A0A1B0GUV1 79 aa11.79□□□□□ -0.52
HLA-DMA-201ENST00000374843 SYS1-DBNDD2H3BUS1 97 aa11.79□□□□□ -0.52
HLA-DMA-201ENST00000374843 Q6ZUT4 128 aa11.79□□□□□ -0.52
HLA-DMA-201ENST00000374843 BAALCQ8WXS3 180 aa11.79□□□□□ -0.52
HLA-DMA-201ENST00000374843 KRTDAPP60985 99 aa11.78□□□□□ -0.52
HLA-DMA-201ENST00000374843 PAPPA-AS1Q5QFB9 102 aa11.78□□□□□ -0.52
HLA-DMA-201ENST00000374843 AMMECR1LQ6DCA0 310 aa11.78□□□□□ -0.52
HLA-DMA-201ENST00000374843 OR5A1Q8NGJ0 315 aa11.78□□□□□ -0.52
HLA-DMA-201ENST00000374843 AMELXQ99217 191 aa11.78□□□□□ -0.52
HLA-DMA-201ENST00000374843 UPK3BQ9BT76 320 aa11.78□□□□□ -0.52
HLA-DMA-201ENST00000374843 TRAV12-1A0A0B4J245 112 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms