RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 COL4A3Q01955 1670 aa7.62□□□□□ -1.19
COL11A1-201ENST00000353414 WFDC10AQ9H1F0 79 aa7.62□□□□□ -1.19
COL11A1-201ENST00000353414 RAI1Q7Z5J4 1906 aaPredicted RBP7.62□□□□□ -1.19
COL11A1-201ENST00000353414 ATRXP46100 2492 aa7.61□□□□□ -1.19
COL11A1-201ENST00000353414 KAAG1Q9UBP8 84 aa7.61□□□□□ -1.19
COL11A1-201ENST00000353414 NUP210LQ5VU65 1888 aa7.61□□□□□ -1.19
COL11A1-201ENST00000353414 TDRG1Q3Y452 100 aa7.61□□□□□ -1.19
COL11A1-201ENST00000353414 SPANXDQ9BXN6 97 aa7.61□□□□□ -1.19
COL11A1-201ENST00000353414 C3orf84H3BNL1 204 aa7.61□□□□□ -1.19
COL11A1-201ENST00000353414 ZNF747Q9BV97 191 aa7.61□□□□□ -1.19
COL11A1-201ENST00000353414 K7ERS5 55 aa7.61□□□□□ -1.19
COL11A1-201ENST00000353414 RNF152Q8N8N0 203 aa7.61□□□□□ -1.19
COL11A1-201ENST00000353414 SORL1Q92673 2214 aa7.61□□□□□ -1.19
COL11A1-201ENST00000353414 TAX1BP3O14907 124 aa7.61□□□□□ -1.19
COL11A1-201ENST00000353414 PROK1P58294 105 aa7.6□□□□□ -1.19
COL11A1-201ENST00000353414 USP17L23D6RBM5 183 aa7.6□□□□□ -1.19
COL11A1-201ENST00000353414 C18orf65Q6ZTR6 163 aa7.6□□□□□ -1.19
COL11A1-201ENST00000353414 C7orf33Q8WU49 177 aa7.6□□□□□ -1.19
COL11A1-201ENST00000353414 OTOGLQ3ZCN5 2332 aa7.6□□□□□ -1.19
COL11A1-201ENST00000353414 PRO0255Q9UI72 69 aa7.6□□□□□ -1.19
COL11A1-201ENST00000353414 IGLV2-8P01709 118 aa7.59□□□□□ -1.19
COL11A1-201ENST00000353414 FXYD2P54710 66 aa7.59□□□□□ -1.19
COL11A1-201ENST00000353414 C22orf34Q6ZV56 151 aa7.59□□□□□ -1.19
COL11A1-201ENST00000353414 TRBV6-1A0A0K0K1D8 114 aa7.59□□□□□ -1.19
COL11A1-201ENST00000353414 SIVA1O15304 175 aa7.59□□□□□ -1.19
COL11A1-201ENST00000353414 NDUFA11Q86Y39 141 aa7.59□□□□□ -1.19
COL11A1-201ENST00000353414 G3V4G9 280 aa7.59□□□□□ -1.19
COL11A1-201ENST00000353414 C1orf158Q8N1D5 194 aa7.59□□□□□ -1.19
COL11A1-201ENST00000353414 PTPRQQ9UMZ3 2332 aa7.59□□□□□ -1.19
COL11A1-201ENST00000353414 CHCHD10Q8WYQ3 142 aaPredicted RBP7.58□□□□□ -1.2
COL11A1-201ENST00000353414 SNURFQ9Y675 71 aa7.58□□□□□ -1.2
COL11A1-201ENST00000353414 COL5A1P20908 1838 aaPredicted RBP7.58□□□□□ -1.2
COL11A1-201ENST00000353414 TEN1Q86WV5 123 aa7.58□□□□□ -1.2
COL11A1-201ENST00000353414 SPANXCQ9NY87 97 aa7.58□□□□□ -1.2
COL11A1-201ENST00000353414 V9GYY9 64 aa7.58□□□□□ -1.2
COL11A1-201ENST00000353414 NUPR1O60356 82 aa7.58□□□□□ -1.2
COL11A1-201ENST00000353414 NANOS2P60321 138 aaKnown RBP7.58□□□□□ -1.2
COL11A1-201ENST00000353414 PATE2Q6UY27 113 aa7.58□□□□□ -1.2
COL11A1-201ENST00000353414 RNASE8Q8TDE3 154 aaKnown RBP7.58□□□□□ -1.2
COL11A1-201ENST00000353414 C1orf147Q96MC9 270 aaPredicted RBP7.58□□□□□ -1.2
COL11A1-201ENST00000353414 LINC01620Q4KN68 170 aa7.57□□□□□ -1.2
COL11A1-201ENST00000353414 LINC00467Q9BRT7 94 aa7.57□□□□□ -1.2
COL11A1-201ENST00000353414 A0A1W2PNU3 283 aaPredicted RBP7.57□□□□□ -1.2
COL11A1-201ENST00000353414 C11orf86A6NJI1 115 aa7.57□□□□□ -1.2
COL11A1-201ENST00000353414 IGLV2-11P01706 119 aa7.57□□□□□ -1.2
COL11A1-201ENST00000353414 C20orf197Q8N268 126 aa7.57□□□□□ -1.2
COL11A1-201ENST00000353414 C14orf177Q52M58 125 aa7.57□□□□□ -1.2
COL11A1-201ENST00000353414 BPY2O14599 106 aa7.56□□□□□ -1.2
COL11A1-201ENST00000353414 TOMM6Q96B49 74 aa7.56□□□□□ -1.2
COL11A1-201ENST00000353414 ENHOQ6UWT2 76 aa7.56□□□□□ -1.2
COL11A1-201ENST00000353414 TRBV10-1A0A0K0K1A3 114 aa7.56□□□□□ -1.2
COL11A1-201ENST00000353414 LOC100131303A0A0U1RQF7 123 aa7.56□□□□□ -1.2
COL11A1-201ENST00000353414 A6NED7 52 aa7.56□□□□□ -1.2
COL11A1-201ENST00000353414 TMEM256-PLSCR3K7ERE1 68 aa7.56□□□□□ -1.2
COL11A1-201ENST00000353414 POM121L12Q8N7R1 296 aa7.56□□□□□ -1.2
COL11A1-201ENST00000353414 GDF5OSQ5U4N7 250 aa7.56□□□□□ -1.2
COL11A1-201ENST00000353414 H0YGX0 51 aa7.56□□□□□ -1.2
COL11A1-201ENST00000353414 UBE2D2P62837 147 aa7.56□□□□□ -1.2
COL11A1-201ENST00000353414 PIK3CD-AS1Q5SR53 167 aa7.56□□□□□ -1.2
COL11A1-201ENST00000353414 ZFAND2AQ8N6M9 145 aa7.56□□□□□ -1.2
COL11A1-201ENST00000353414 FRMD6-AS1P0C7T7 363 aa7.55□□□□□ -1.2
COL11A1-201ENST00000353414 OXLD1Q5BKU9 147 aa7.55□□□□□ -1.2
COL11A1-201ENST00000353414 CLUHP3Q96NS8 147 aa7.55□□□□□ -1.2
COL11A1-201ENST00000353414 DAZAP2Q15038 168 aaPredicted RBP7.55□□□□□ -1.2
COL11A1-201ENST00000353414 CIRBP-AS1Q8TBR5 109 aa7.55□□□□□ -1.2
COL11A1-201ENST00000353414 C20orf173Q96LM9 149 aa7.55□□□□□ -1.2
COL11A1-201ENST00000353414 BBC3Q96PG8 261 aaPredicted RBP7.54□□□□□ -1.2
COL11A1-201ENST00000353414 Q8N976 141 aa7.54□□□□□ -1.2
COL11A1-201ENST00000353414 IGFL2Q6UWQ7 119 aa7.54□□□□□ -1.2
COL11A1-201ENST00000353414 WFDC13Q8IUB5 93 aa7.54□□□□□ -1.2
COL11A1-201ENST00000353414 EML5Q05BV3 1969 aa7.53□□□□□ -1.2
COL11A1-201ENST00000353414 A6NDX4 124 aa7.53□□□□□ -1.2
COL11A1-201ENST00000353414 Q8NA96 180 aa7.53□□□□□ -1.2
COL11A1-201ENST00000353414 FAM236DA0A1B0GTK5 79 aa7.53□□□□□ -1.2
COL11A1-201ENST00000353414 FAM240AA0A1B0GVK7 77 aa7.53□□□□□ -1.2
COL11A1-201ENST00000353414 FAM236CP0DP71 79 aa7.53□□□□□ -1.2
COL11A1-201ENST00000353414 PRR15LQ9BU68 103 aa7.53□□□□□ -1.2
COL11A1-201ENST00000353414 FAM208BQ5VWN6 2430 aa7.53□□□□□ -1.2
COL11A1-201ENST00000353414 NDUFC2-KCTD14E9PQ53 114 aa7.53□□□□□ -1.2
COL11A1-201ENST00000353414 FAM30AQ9NZY2 134 aa7.53□□□□□ -1.2
COL11A1-201ENST00000353414 INSL3P51460 131 aa7.53□□□□□ -1.2
COL11A1-201ENST00000353414 GPR179Q6PRD1 2367 aa7.53□□□□□ -1.2
COL11A1-201ENST00000353414 A0A0J9YX75 114 aa7.52□□□□□ -1.2
COL11A1-201ENST00000353414 A8MZ25 164 aa7.52□□□□□ -1.21
COL11A1-201ENST00000353414 IGHV1-58A0A0C4DH39 117 aa7.52□□□□□ -1.21
COL11A1-201ENST00000353414 TCL1BO95988 128 aa7.52□□□□□ -1.21
COL11A1-201ENST00000353414 MT-ATP8P03928 68 aa7.52□□□□□ -1.21
COL11A1-201ENST00000353414 IGLC6P0CF74 106 aa7.52□□□□□ -1.21
COL11A1-201ENST00000353414 ZFAND3Q9H8U3 227 aa7.52□□□□□ -1.21
COL11A1-201ENST00000353414 PRRC2AP48634 2157 aaKnown RBP7.52□□□□□ -1.21
COL11A1-201ENST00000353414 LY6LH3BQJ8 138 aa7.51□□□□□ -1.21
COL11A1-201ENST00000353414 ODF3L1Q8IXM7 274 aa7.51□□□□□ -1.21
COL11A1-201ENST00000353414 KIR2DL5BQ8NHK3 375 aa7.51□□□□□ -1.21
COL11A1-201ENST00000353414 MED14OSP0DP75 135 aa7.51□□□□□ -1.21
COL11A1-201ENST00000353414 ZFHX2Q9C0A1 2572 aaPredicted RBP7.51□□□□□ -1.21
COL11A1-201ENST00000353414 CCDC140Q96MF4 163 aa7.51□□□□□ -1.21
COL11A1-201ENST00000353414 LENEPQ9Y5L5 61 aa7.51□□□□□ -1.21
COL11A1-201ENST00000353414 Q6YL49 198 aa7.51□□□□□ -1.21
COL11A1-201ENST00000353414 ZNF80P51504 273 aaPredicted RBP7.51□□□□□ -1.21
COL11A1-201ENST00000353414 MSMPQ1L6U9 139 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms