RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 CRIP2P52943 208 aaPredicted RBP9.13□□□□□ -0.95
COL12A1-202ENST00000345356 MED12LQ86YW9 2145 aa9.13□□□□□ -0.95
COL12A1-202ENST00000345356 CAMK2N2Q96S95 79 aa9.13□□□□□ -0.95
COL12A1-202ENST00000345356 DKK4Q9UBT3 224 aa9.13□□□□□ -0.95
COL12A1-202ENST00000345356 BLCAPP62952 87 aa9.13□□□□□ -0.95
COL12A1-202ENST00000345356 NDUFA1O15239 70 aa9.12□□□□□ -0.95
COL12A1-202ENST00000345356 ATP5EP56381 51 aaPredicted RBP9.12□□□□□ -0.95
COL12A1-202ENST00000345356 A8MZ25 164 aa9.12□□□□□ -0.95
COL12A1-202ENST00000345356 CSDC2Q9Y534 153 aaKnown RBP9.12□□□□□ -0.95
COL12A1-202ENST00000345356 PCDH15Q96QU1 1955 aa9.12□□□□□ -0.95
COL12A1-202ENST00000345356 LINC00467Q9BRT7 94 aa9.12□□□□□ -0.95
COL12A1-202ENST00000345356 GNLYP22749 145 aa9.12□□□□□ -0.95
COL12A1-202ENST00000345356 NDUFC1O43677 76 aa9.11□□□□□ -0.95
COL12A1-202ENST00000345356 SLURP1P55000 103 aa9.11□□□□□ -0.95
COL12A1-202ENST00000345356 CHKB-CPT1BH3BT56 60 aa9.11□□□□□ -0.95
COL12A1-202ENST00000345356 ADAMTS9Q9P2N4 1935 aa9.11□□□□□ -0.95
COL12A1-202ENST00000345356 A0A0J9YX75 114 aa9.11□□□□□ -0.95
COL12A1-202ENST00000345356 CCDC140Q96MF4 163 aa9.11□□□□□ -0.95
COL12A1-202ENST00000345356 LOC107984640A0A0U1RRK4 108 aa9.11□□□□□ -0.95
COL12A1-202ENST00000345356 K7EMT4 169 aa9.11□□□□□ -0.95
COL12A1-202ENST00000345356 UBE2D1P51668 147 aa9.11□□□□□ -0.95
COL12A1-202ENST00000345356 UBE2D3P61077 147 aa9.11□□□□□ -0.95
COL12A1-202ENST00000345356 UBE2D2P62837 147 aa9.11□□□□□ -0.95
COL12A1-202ENST00000345356 IGHV4-59P01825 116 aa9.1□□□□□ -0.95
COL12A1-202ENST00000345356 C16orf74Q96GX8 76 aa9.1□□□□□ -0.95
COL12A1-202ENST00000345356 PPDPFQ9H3Y8 114 aa9.1□□□□□ -0.95
COL12A1-202ENST00000345356 KLK5Q9Y337 293 aaPredicted RBP9.1□□□□□ -0.95
COL12A1-202ENST00000345356 SMIM26A0A096LP01 95 aa9.1□□□□□ -0.95
COL12A1-202ENST00000345356 RNF223E7ERA6 249 aa9.1□□□□□ -0.95
COL12A1-202ENST00000345356 CDIP1Q9H305 208 aa9.1□□□□□ -0.95
COL12A1-202ENST00000345356 J3QKU1 62 aa9.1□□□□□ -0.95
COL12A1-202ENST00000345356 SMAD5-AS1Q9Y6J3 95 aa9.1□□□□□ -0.95
COL12A1-202ENST00000345356 IGKV2D-24A0A075B6R9 120 aa9.09□□□□□ -0.95
COL12A1-202ENST00000345356 M0QY20 66 aa9.09□□□□□ -0.95
COL12A1-202ENST00000345356 DEFB121Q5J5C9 76 aa9.09□□□□□ -0.95
COL12A1-202ENST00000345356 ZMAT4Q9H898 229 aa9.09□□□□□ -0.95
COL12A1-202ENST00000345356 COX7BP24311 80 aa9.09□□□□□ -0.95
COL12A1-202ENST00000345356 C20orf173Q96LM9 149 aa9.09□□□□□ -0.95
COL12A1-202ENST00000345356 Q6JHZ5 121 aa9.08□□□□□ -0.96
COL12A1-202ENST00000345356 RIF1Q5UIP0 2472 aaKnown RBP9.08□□□□□ -0.96
COL12A1-202ENST00000345356 TRBV27A0A0K0K1C4 114 aa9.08□□□□□ -0.96
COL12A1-202ENST00000345356 SPAG11BQ08648 103 aa9.08□□□□□ -0.96
COL12A1-202ENST00000345356 DEFB112Q30KQ8 113 aa9.08□□□□□ -0.96
COL12A1-202ENST00000345356 GRNP28799 593 aaKnown RBP9.07□□□□□ -0.96
COL12A1-202ENST00000345356 SIRPDQ9H106 197 aa9.07□□□□□ -0.96
COL12A1-202ENST00000345356 ZFAND2AQ8N6M9 145 aa9.07□□□□□ -0.96
COL12A1-202ENST00000345356 C11orf21Q9P2W6 132 aa9.07□□□□□ -0.96
COL12A1-202ENST00000345356 IGHV4-38-2P0DP08 117 aa9.06□□□□□ -0.96
COL12A1-202ENST00000345356 GPHB5Q86YW7 130 aa9.06□□□□□ -0.96
COL12A1-202ENST00000345356 IGHV4OR15-8A0A075B7B6 117 aa9.06□□□□□ -0.96
COL12A1-202ENST00000345356 A0A087WW49 117 aa9.06□□□□□ -0.96
COL12A1-202ENST00000345356 DAZAP2Q15038 168 aaPredicted RBP9.06□□□□□ -0.96
COL12A1-202ENST00000345356 A0A096LNJ9 63 aa9.06□□□□□ -0.96
COL12A1-202ENST00000345356 NDUFB1O75438 58 aa9.06□□□□□ -0.96
COL12A1-202ENST00000345356 SERP1Q9Y6X1 66 aa9.06□□□□□ -0.96
COL12A1-202ENST00000345356 TRBV10-1A0A0K0K1A3 114 aa9.06□□□□□ -0.96
COL12A1-202ENST00000345356 APOC4P55056 127 aa9.05□□□□□ -0.96
COL12A1-202ENST00000345356 A0A087WVE0 104 aa9.05□□□□□ -0.96
COL12A1-202ENST00000345356 NRGNQ92686 78 aa9.05□□□□□ -0.96
COL12A1-202ENST00000345356 SEM1Q6ZVN7 128 aa9.05□□□□□ -0.96
COL12A1-202ENST00000345356 KIAA1549LQ6ZVL6 1849 aa9.05□□□□□ -0.96
COL12A1-202ENST00000345356 PYGO1Q9Y3Y4 419 aa9.05□□□□□ -0.96
COL12A1-202ENST00000345356 TRBV6-5A0A0K0K1A5 114 aa9.04□□□□□ -0.96
COL12A1-202ENST00000345356 IBA57-AS1B1ANH7 110 aa9.04□□□□□ -0.96
COL12A1-202ENST00000345356 TSHBP01222 138 aa9.04□□□□□ -0.96
COL12A1-202ENST00000345356 FAM222AQ5U5X8 452 aa9.04□□□□□ -0.96
COL12A1-202ENST00000345356 CNFNQ9BYD5 112 aa9.04□□□□□ -0.96
COL12A1-202ENST00000345356 ZFP36P26651 326 aaKnown RBP9.04□□□□□ -0.96
COL12A1-202ENST00000345356 MRPS36P82909 103 aaKnown RBP9.04□□□□□ -0.96
COL12A1-202ENST00000345356 ESM1Q9NQ30 184 aa9.04□□□□□ -0.96
COL12A1-202ENST00000345356 ZFAND3Q9H8U3 227 aa9.03□□□□□ -0.96
COL12A1-202ENST00000345356 LINC01548A6NM66 108 aa9.03□□□□□ -0.96
COL12A1-202ENST00000345356 TANC2Q9HCD6 1990 aa9.03□□□□□ -0.96
COL12A1-202ENST00000345356 J3QLI3 93 aa9.03□□□□□ -0.96
COL12A1-202ENST00000345356 POLR2KP53803 58 aaKnown RBP9.03□□□□□ -0.96
COL12A1-202ENST00000345356 FAM19A3Q7Z5A8 133 aa9.02□□□□□ -0.96
COL12A1-202ENST00000345356 TMEM131Q92545 1883 aa9.02□□□□□ -0.97
COL12A1-202ENST00000345356 CCL24O00175 119 aa9.02□□□□□ -0.97
COL12A1-202ENST00000345356 IGFL2Q6UWQ7 119 aa9.02□□□□□ -0.97
COL12A1-202ENST00000345356 ODF3Q96PU9 254 aa9.02□□□□□ -0.97
COL12A1-202ENST00000345356 RNASE3P12724 160 aaKnown RBP9.02□□□□□ -0.97
COL12A1-202ENST00000345356 C6orf99Q4VX62 202 aa9.02□□□□□ -0.97
COL12A1-202ENST00000345356 PRR9Q5T870 116 aa9.02□□□□□ -0.97
COL12A1-202ENST00000345356 POM121L12Q8N7R1 296 aa9.02□□□□□ -0.97
COL12A1-202ENST00000345356 SMIM11BQ8TCY0 68 aa9.02□□□□□ -0.97
COL12A1-202ENST00000345356 RMI2Q96E14 147 aa9.02□□□□□ -0.97
COL12A1-202ENST00000345356 KIF26AQ9ULI4 1882 aaPredicted RBP9.02□□□□□ -0.97
COL12A1-202ENST00000345356 WISP2O76076 250 aa9.01□□□□□ -0.97
COL12A1-202ENST00000345356 PROK1P58294 105 aa9.01□□□□□ -0.97
COL12A1-202ENST00000345356 IGIPA6NJ69 53 aa9.01□□□□□ -0.97
COL12A1-202ENST00000345356 TSPEAR-AS2P59090 65 aa9.01□□□□□ -0.97
COL12A1-202ENST00000345356 Q6ZSV7 163 aa9.01□□□□□ -0.97
COL12A1-202ENST00000345356 HCFC1P51610 2035 aa9.01□□□□□ -0.97
COL12A1-202ENST00000345356 SOSTDC1Q6X4U4 206 aa9.01□□□□□ -0.97
COL12A1-202ENST00000345356 IGHV4-61A0A0C4DH41 118 aa9□□□□□ -0.97
COL12A1-202ENST00000345356 MIFP14174 115 aa9□□□□□ -0.97
COL12A1-202ENST00000345356 IGLV4-69A0A075B6H9 119 aa9□□□□□ -0.97
COL12A1-202ENST00000345356 K7ENP7 123 aa9□□□□□ -0.97
COL12A1-202ENST00000345356 PRR4Q16378 134 aa8.99□□□□□ -0.97
COL12A1-202ENST00000345356 TRAV7A0A075B6U4 112 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms