RNA–Protein interactions for RNA: ENST00000339113.8

ATAD3A-201, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 2

Gene ATAD3A, Length 2,330 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-201ENST00000339113 OR11H2Q8NH07 326 aa12.45□□□□□ -0.42
ATAD3A-201ENST00000339113 GAGE12HA6NDE8 117 aa12.45□□□□□ -0.42
ATAD3A-201ENST00000339113 H3BMG7 143 aa12.45□□□□□ -0.42
ATAD3A-201ENST00000339113 GIG44P09565 113 aaPredicted RBP12.45□□□□□ -0.42
ATAD3A-201ENST00000339113 C11orf72Q8NBR9 251 aa12.45□□□□□ -0.42
ATAD3A-201ENST00000339113 ATRQ13535 2644 aa12.45□□□□□ -0.42
ATAD3A-201ENST00000339113 IGHV3OR16-12A0A075B7B8 117 aa12.44□□□□□ -0.42
ATAD3A-201ENST00000339113 CYSRT1A8MQ03 144 aa12.44□□□□□ -0.42
ATAD3A-201ENST00000339113 GAGE13Q4V321 117 aa12.44□□□□□ -0.42
ATAD3A-201ENST00000339113 PRO0461Q9UI25 63 aa12.44□□□□□ -0.42
ATAD3A-201ENST00000339113 CMC4P56277 68 aaPredicted RBP12.44□□□□□ -0.42
ATAD3A-201ENST00000339113 CITED1Q99966 193 aa12.44□□□□□ -0.42
ATAD3A-201ENST00000339113 LINC00467Q9BRT7 94 aa12.44□□□□□ -0.42
ATAD3A-201ENST00000339113 SCGB3A1Q96QR1 104 aa12.43□□□□□ -0.42
ATAD3A-201ENST00000339113 FAM110AQ9BQ89 295 aa12.43□□□□□ -0.42
ATAD3A-201ENST00000339113 A6NJY4 79 aa12.43□□□□□ -0.42
ATAD3A-201ENST00000339113 RPL35AP18077 110 aaKnown RBP12.43□□□□□ -0.42
ATAD3A-201ENST00000339113 DEFB104AQ8WTQ1 72 aa12.43□□□□□ -0.42
ATAD3A-201ENST00000339113 TEP1Q99973 2627 aaKnown RBP12.43□□□□□ -0.42
ATAD3A-201ENST00000339113 ZNF56Q15929 161 aa12.42□□□□□ -0.42
ATAD3A-201ENST00000339113 NOTCH3Q9UM47 2321 aa12.42□□□□□ -0.42
ATAD3A-201ENST00000339113 ZNF415Q09FC8 603 aa12.42□□□□□ -0.42
ATAD3A-201ENST00000339113 ETDBQ3ZM63 59 aa12.42□□□□□ -0.42
ATAD3A-201ENST00000339113 MORN3Q6PF18 240 aaPredicted RBP12.42□□□□□ -0.42
ATAD3A-201ENST00000339113 IGHV3-73A0A0B4J1V6 119 aa12.41□□□□□ -0.42
ATAD3A-201ENST00000339113 M0QY20 66 aa12.41□□□□□ -0.42
ATAD3A-201ENST00000339113 M0R2P5 195 aa12.41□□□□□ -0.42
ATAD3A-201ENST00000339113 GTSF1LQ9H1H1 148 aa12.41□□□□□ -0.42
ATAD3A-201ENST00000339113 PPP1R17O96001 155 aa12.4□□□□□ -0.42
ATAD3A-201ENST00000339113 TRRAPQ9Y4A5 3859 aa12.4□□□□□ -0.42
ATAD3A-201ENST00000339113 POLR2KP53803 58 aaKnown RBP12.4□□□□□ -0.42
ATAD3A-201ENST00000339113 CFAP161Q6P656 301 aa12.4□□□□□ -0.42
ATAD3A-201ENST00000339113 SH2D6Q7Z4S9 175 aa12.39□□□□□ -0.43
ATAD3A-201ENST00000339113 LINC01549A6NIU2 74 aa12.39□□□□□ -0.43
ATAD3A-201ENST00000339113 BAALCQ8WXS3 180 aa12.39□□□□□ -0.43
ATAD3A-201ENST00000339113 MRPL16Q9NX20 251 aaKnown RBP12.39□□□□□ -0.43
ATAD3A-201ENST00000339113 BAHCC1Q9P281 2608 aa12.38□□□□□ -0.43
ATAD3A-201ENST00000339113 C2orf66Q6UXQ4 117 aa12.38□□□□□ -0.43
ATAD3A-201ENST00000339113 ATP6V0E2Q8NHE4 81 aa12.38□□□□□ -0.43
ATAD3A-201ENST00000339113 SMAGPQ0VAQ4 97 aa12.38□□□□□ -0.43
ATAD3A-201ENST00000339113 SDHAF1A6NFY7 115 aa12.37□□□□□ -0.43
ATAD3A-201ENST00000339113 RPL32P62910 135 aaKnown RBP12.37□□□□□ -0.43
ATAD3A-201ENST00000339113 CYSLTR1Q9Y271 337 aa12.37□□□□□ -0.43
ATAD3A-201ENST00000339113 PRSS29PA6NIE9 313 aa12.37□□□□□ -0.43
ATAD3A-201ENST00000339113 UBE2D1P51668 147 aa12.37□□□□□ -0.43
ATAD3A-201ENST00000339113 Q6ZSN1 163 aa12.37□□□□□ -0.43
ATAD3A-201ENST00000339113 PRADC1Q9BSG0 188 aa12.37□□□□□ -0.43
ATAD3A-201ENST00000339113 SPXQ9BT56 116 aa12.37□□□□□ -0.43
ATAD3A-201ENST00000339113 TRBV6-5A0A0K0K1A5 114 aa12.36□□□□□ -0.43
ATAD3A-201ENST00000339113 P0DMU3 169 aa12.36□□□□□ -0.43
ATAD3A-201ENST00000339113 FAM231AP0DMU4 169 aa12.36□□□□□ -0.43
ATAD3A-201ENST00000339113 FAM231CP0DMU5 169 aa12.36□□□□□ -0.43
ATAD3A-201ENST00000339113 CFAP126Q5VTH2 177 aa12.36□□□□□ -0.43
ATAD3A-201ENST00000339113 CSNK1G2-AS1Q8NCQ2 148 aa12.36□□□□□ -0.43
ATAD3A-201ENST00000339113 PTH2Q96A98 100 aa12.36□□□□□ -0.43
ATAD3A-201ENST00000339113 Q9UF83 564 aa12.36□□□□□ -0.43
ATAD3A-201ENST00000339113 PAPPA-AS1Q5QFB9 102 aa12.36□□□□□ -0.43
ATAD3A-201ENST00000339113 C9orf66Q5T8R8 295 aa12.36□□□□□ -0.43
ATAD3A-201ENST00000339113 A8MWV9 139 aa12.35□□□□□ -0.43
ATAD3A-201ENST00000339113 INSL3P51460 131 aa12.35□□□□□ -0.43
ATAD3A-201ENST00000339113 IL17DQ8TAD2 202 aa12.35□□□□□ -0.43
ATAD3A-201ENST00000339113 PGPEP1Q9NXJ5 209 aa12.35□□□□□ -0.43
ATAD3A-201ENST00000339113 A0A1B0GV72 72 aa12.34□□□□□ -0.43
ATAD3A-201ENST00000339113 VCYO14598 125 aa12.34□□□□□ -0.43
ATAD3A-201ENST00000339113 PIK3CD-AS1Q5SR53 167 aa12.34□□□□□ -0.43
ATAD3A-201ENST00000339113 ZNF815PA8K554 130 aa12.34□□□□□ -0.43
ATAD3A-201ENST00000339113 NACAE9PAV3 2078 aa12.34□□□□□ -0.43
ATAD3A-201ENST00000339113 TRBV27A0A0K0K1C4 114 aa12.33□□□□□ -0.44
ATAD3A-201ENST00000339113 APOMO95445 188 aa12.33□□□□□ -0.44
ATAD3A-201ENST00000339113 FOXI1Q12951 378 aa12.33□□□□□ -0.44
ATAD3A-201ENST00000339113 ZFP2Q6ZN57 461 aa12.33□□□□□ -0.44
ATAD3A-201ENST00000339113 C1QTNF4Q9BXJ3 329 aa12.33□□□□□ -0.44
ATAD3A-201ENST00000339113 FBN1P35555 2871 aaKnown RBP12.32□□□□□ -0.44
ATAD3A-201ENST00000339113 UBE2D3P61077 147 aa12.32□□□□□ -0.44
ATAD3A-201ENST00000339113 UBE2D2P62837 147 aa12.32□□□□□ -0.44
ATAD3A-201ENST00000339113 KRTAP24-1Q3LI83 254 aa12.32□□□□□ -0.44
ATAD3A-201ENST00000339113 TMEM263Q8WUH6 116 aaKnown RBP12.32□□□□□ -0.44
ATAD3A-201ENST00000339113 LYRM7Q5U5X0 104 aa12.32□□□□□ -0.44
ATAD3A-201ENST00000339113 SCGB1D4Q6XE38 83 aa12.32□□□□□ -0.44
ATAD3A-201ENST00000339113 TRGV1A0A0A0MS02 117 aa12.31□□□□□ -0.44
ATAD3A-201ENST00000339113 PLAC8L1A1L4L8 177 aa12.31□□□□□ -0.44
ATAD3A-201ENST00000339113 RS1O15537 224 aa12.31□□□□□ -0.44
ATAD3A-201ENST00000339113 Q6ZTI0 123 aa12.31□□□□□ -0.44
ATAD3A-201ENST00000339113 SRSF9Q13242 221 aaKnown RBP eCLIP12.31□□□□□ -0.44
ATAD3A-201ENST00000339113 KIR2DL4Q99706 377 aa12.31□□□□□ -0.44
ATAD3A-201ENST00000339113 EDA2RQ9HAV5 297 aa12.3□□□□□ -0.44
ATAD3A-201ENST00000339113 IGIPA6NJ69 53 aa12.29□□□□□ -0.44
ATAD3A-201ENST00000339113 TSPAN13O95857 204 aa12.29□□□□□ -0.44
ATAD3A-201ENST00000339113 SMCPP49901 116 aaPredicted RBP12.29□□□□□ -0.44
ATAD3A-201ENST00000339113 HERVK_113P61574 105 aa12.29□□□□□ -0.44
ATAD3A-201ENST00000339113 RPL39P62891 51 aaKnown RBP12.29□□□□□ -0.44
ATAD3A-201ENST00000339113 WFDC9Q8NEX5 89 aa12.29□□□□□ -0.44
ATAD3A-201ENST00000339113 NOP10Q9NPE3 64 aaKnown RBP12.29□□□□□ -0.44
ATAD3A-201ENST00000339113 IGLV4-69A0A075B6H9 119 aa12.29□□□□□ -0.44
ATAD3A-201ENST00000339113 PLEKHB2Q96CS7 222 aa12.29□□□□□ -0.44
ATAD3A-201ENST00000339113 TMEM141Q96I45 108 aa12.29□□□□□ -0.44
ATAD3A-201ENST00000339113 A0A0J9YY99 117 aa12.28□□□□□ -0.44
ATAD3A-201ENST00000339113 TSHBP01222 138 aa12.28□□□□□ -0.44
ATAD3A-201ENST00000339113 MTURNQ8N3F0 131 aa12.28□□□□□ -0.44
ATAD3A-201ENST00000339113 TP53TG1Q9Y2A0 90 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms