RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 NTM-AS1Q6ZSK4 140 aa13.93□□□□□ -0.18
MRPL40-201ENST00000333130 CHCHD5Q9BSY4 110 aa13.93□□□□□ -0.18
MRPL40-201ENST00000333130 CHCHD7Q9BUK0 85 aa13.93□□□□□ -0.18
MRPL40-201ENST00000333130 IGHV1-24A0A0C4DH33 117 aa13.92□□□□□ -0.18
MRPL40-201ENST00000333130 TRBV27A0A0K0K1C4 114 aa13.92□□□□□ -0.18
MRPL40-201ENST00000333130 SUMO2P61956 95 aaKnown RBP13.92□□□□□ -0.18
MRPL40-201ENST00000333130 C20orf78Q9BR46 151 aa13.92□□□□□ -0.18
MRPL40-201ENST00000333130 TMEM262E9PQX1 116 aa13.91□□□□□ -0.18
MRPL40-201ENST00000333130 TNFRSF6BO95407 300 aa13.91□□□□□ -0.18
MRPL40-201ENST00000333130 NPYP01303 97 aa13.91□□□□□ -0.18
MRPL40-201ENST00000333130 RPL32P62910 135 aaKnown RBP13.91□□□□□ -0.18
MRPL40-201ENST00000333130 NIT1Q86X76 327 aa13.91□□□□□ -0.18
MRPL40-201ENST00000333130 LAMTOR2Q9Y2Q5 125 aa13.91□□□□□ -0.18
MRPL40-201ENST00000333130 FRAS1Q86XX4 4008 aa13.91□□□□□ -0.18
MRPL40-201ENST00000333130 RTL8CO15255 209 aa13.9□□□□□ -0.18
MRPL40-201ENST00000333130 APCSP02743 223 aa13.9□□□□□ -0.18
MRPL40-201ENST00000333130 IQCJQ1A5X6 159 aa13.9□□□□□ -0.18
MRPL40-201ENST00000333130 PRELID3AQ96N28 172 aa13.9□□□□□ -0.18
MRPL40-201ENST00000333130 I3L3M4 83 aa13.89□□□□□ -0.19
MRPL40-201ENST00000333130 LAGE3Q14657 143 aa13.89□□□□□ -0.19
MRPL40-201ENST00000333130 PRSS29PA6NIE9 313 aa13.88□□□□□ -0.19
MRPL40-201ENST00000333130 UBE2L6O14933 153 aa13.88□□□□□ -0.19
MRPL40-201ENST00000333130 ATP6V1G1O75348 118 aa13.88□□□□□ -0.19
MRPL40-201ENST00000333130 TMEM243Q9BU79 118 aa13.88□□□□□ -0.19
MRPL40-201ENST00000333130 PMCHP20382 165 aa13.87□□□□□ -0.19
MRPL40-201ENST00000333130 AMTP48728 403 aa13.87□□□□□ -0.19
MRPL40-201ENST00000333130 MRPL18Q9H0U6 180 aaKnown RBP13.87□□□□□ -0.19
MRPL40-201ENST00000333130 DNAH10Q8IVF4 4471 aa13.87□□□□□ -0.19
MRPL40-201ENST00000333130 PRSS47A8MTI9 375 aa13.86□□□□□ -0.19
MRPL40-201ENST00000333130 IBA57-AS1B1ANH7 110 aa13.86□□□□□ -0.19
MRPL40-201ENST00000333130 VCYO14598 125 aa13.86□□□□□ -0.19
MRPL40-201ENST00000333130 TSHBP01222 138 aa13.86□□□□□ -0.19
MRPL40-201ENST00000333130 SMIM2Q9BVW6 85 aa13.86□□□□□ -0.19
MRPL40-201ENST00000333130 DNAH2Q9P225 4427 aa13.86□□□□□ -0.19
MRPL40-201ENST00000333130 S100A1P23297 94 aa13.85□□□□□ -0.19
MRPL40-201ENST00000333130 KIAA1644Q3SXP7 199 aa13.85□□□□□ -0.19
MRPL40-201ENST00000333130 TRAV8-3A0A0A6YYJ7 113 aa13.84□□□□□ -0.19
MRPL40-201ENST00000333130 DEFB104AQ8WTQ1 72 aa13.84□□□□□ -0.19
MRPL40-201ENST00000333130 GAGE6Q13070 117 aa13.83□□□□□ -0.19
MRPL40-201ENST00000333130 Q9HAA7 133 aa13.83□□□□□ -0.19
MRPL40-201ENST00000333130 TRAPPC1Q9Y5R8 145 aa13.83□□□□□ -0.19
MRPL40-201ENST00000333130 PSCAO43653 123 aa13.83□□□□□ -0.2
MRPL40-201ENST00000333130 SCO1O75880 301 aa13.83□□□□□ -0.2
MRPL40-201ENST00000333130 CRPP02741 224 aa13.83□□□□□ -0.2
MRPL40-201ENST00000333130 FABP9Q0Z7S8 132 aa13.83□□□□□ -0.2
MRPL40-201ENST00000333130 MPV17L2Q567V2 206 aa13.83□□□□□ -0.2
MRPL40-201ENST00000333130 Q8N3U1 123 aa13.83□□□□□ -0.2
MRPL40-201ENST00000333130 KIR2DL4Q99706 377 aa13.83□□□□□ -0.2
MRPL40-201ENST00000333130 ALKBH7Q9BT30 221 aaPredicted RBP13.83□□□□□ -0.2
MRPL40-201ENST00000333130 MAP1LC3AQ9H492 121 aa13.83□□□□□ -0.2
MRPL40-201ENST00000333130 COLCA2A8K830 154 aa13.82□□□□□ -0.2
MRPL40-201ENST00000333130 ANGP03950 147 aaKnown RBP13.82□□□□□ -0.2
MRPL40-201ENST00000333130 ESDP10768 282 aa13.82□□□□□ -0.2
MRPL40-201ENST00000333130 RMI2Q96E14 147 aa13.82□□□□□ -0.2
MRPL40-201ENST00000333130 TM2D2Q9BX73 214 aa13.82□□□□□ -0.2
MRPL40-201ENST00000333130 KLK12Q9UKR0 248 aa13.82□□□□□ -0.2
MRPL40-201ENST00000333130 TCAPO15273 167 aa13.81□□□□□ -0.2
MRPL40-201ENST00000333130 FCER1GP30273 86 aa13.81□□□□□ -0.2
MRPL40-201ENST00000333130 Q0VG73 95 aa13.81□□□□□ -0.2
MRPL40-201ENST00000333130 H7C423 109 aa13.8□□□□□ -0.2
MRPL40-201ENST00000333130 EREGO14944 169 aa13.79□□□□□ -0.2
MRPL40-201ENST00000333130 RBX1P62877 108 aa13.79□□□□□ -0.2
MRPL40-201ENST00000333130 AMMECR1LQ6DCA0 310 aa13.79□□□□□ -0.2
MRPL40-201ENST00000333130 UBE2WQ96B02 151 aa13.79□□□□□ -0.2
MRPL40-201ENST00000333130 COX11Q9Y6N1 276 aa13.79□□□□□ -0.2
MRPL40-201ENST00000333130 TNP2Q05952 138 aa13.78□□□□□ -0.2
MRPL40-201ENST00000333130 Q6ZRN7 208 aaPredicted RBP13.78□□□□□ -0.2
MRPL40-201ENST00000333130 Q8N8P6 123 aa13.78□□□□□ -0.2
MRPL40-201ENST00000333130 LOC389332A0A1B0GUA5 103 aa13.77□□□□□ -0.21
MRPL40-201ENST00000333130 A0A1B0GUV1 79 aa13.77□□□□□ -0.21
MRPL40-201ENST00000333130 Q8N976 141 aa13.77□□□□□ -0.21
MRPL40-201ENST00000333130 SMAGPQ0VAQ4 97 aa13.76□□□□□ -0.21
MRPL40-201ENST00000333130 NXT2Q9NPJ8 142 aaKnown RBP13.76□□□□□ -0.21
MRPL40-201ENST00000333130 DNAH17Q9UFH2 4485 aa13.76□□□□□ -0.21
MRPL40-201ENST00000333130 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.75□□□□□ -0.21
MRPL40-201ENST00000333130 IGKV2-29A2NJV5 120 aaPredicted RBP13.75□□□□□ -0.21
MRPL40-201ENST00000333130 K7EMI3 77 aa13.75□□□□□ -0.21
MRPL40-201ENST00000333130 RAB5AP20339 215 aa13.75□□□□□ -0.21
MRPL40-201ENST00000333130 FAT2Q9NYQ8 4349 aa13.75□□□□□ -0.21
MRPL40-201ENST00000333130 ZNF25P17030 456 aaPredicted RBP13.74□□□□□ -0.21
MRPL40-201ENST00000333130 IFI27P40305 119 aaPredicted RBP13.74□□□□□ -0.21
MRPL40-201ENST00000333130 MIAQ16674 131 aa13.74□□□□□ -0.21
MRPL40-201ENST00000333130 RNASEKQ6P5S7 137 aaKnown RBP13.74□□□□□ -0.21
MRPL40-201ENST00000333130 IGKV2D-24A0A075B6R9 120 aa13.73□□□□□ -0.21
MRPL40-201ENST00000333130 MRPL52Q86TS9 123 aaKnown RBP13.73□□□□□ -0.21
MRPL40-201ENST00000333130 C20orf203Q8NBC4 194 aa13.73□□□□□ -0.21
MRPL40-201ENST00000333130 TMEM18Q96B42 140 aa13.73□□□□□ -0.21
MRPL40-201ENST00000333130 TMEM101Q96IK0 257 aa13.73□□□□□ -0.21
MRPL40-201ENST00000333130 C1orf43Q9BWL3 253 aa13.73□□□□□ -0.21
MRPL40-201ENST00000333130 LINC01546A6NGU7 62 aa13.72□□□□□ -0.21
MRPL40-201ENST00000333130 FGF6P10767 208 aa13.72□□□□□ -0.21
MRPL40-201ENST00000333130 LINC00269Q8N2A0 174 aa13.72□□□□□ -0.21
MRPL40-201ENST00000333130 C18orf32Q8TCD1 76 aa13.72□□□□□ -0.21
MRPL40-201ENST00000333130 HECTD4Q9Y4D8 3996 aa13.72□□□□□ -0.21
MRPL40-201ENST00000333130 IGLV4-60A0A075B6I1 120 aa13.71□□□□□ -0.21
MRPL40-201ENST00000333130 TRGC2P03986 189 aa13.71□□□□□ -0.21
MRPL40-201ENST00000333130 A0A1B0GVY2 172 aa13.71□□□□□ -0.22
MRPL40-201ENST00000333130 REG3AQ06141 175 aa13.71□□□□□ -0.22
MRPL40-201ENST00000333130 CLPSL2Q6UWE3 100 aa13.71□□□□□ -0.22
MRPL40-201ENST00000333130 PRR34Q9NV39 138 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms