RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 GAGE12BA1L429 117 aa13.31□□□□□ -0.28
EXOSC3-201ENST00000327304 GAGE7O76087 117 aa13.31□□□□□ -0.28
EXOSC3-201ENST00000327304 GAGE12FP0CL80 117 aa13.31□□□□□ -0.28
EXOSC3-201ENST00000327304 GAGE12GP0CL81 117 aa13.31□□□□□ -0.28
EXOSC3-201ENST00000327304 GAGE12IP0CL82 117 aa13.31□□□□□ -0.28
EXOSC3-201ENST00000327304 Q6ZSN1 163 aa13.31□□□□□ -0.28
EXOSC3-201ENST00000327304 DKK2Q9UBU2 259 aa13.31□□□□□ -0.28
EXOSC3-201ENST00000327304 NACAE9PAV3 2078 aa13.31□□□□□ -0.28
EXOSC3-201ENST00000327304 C14orf144Q96I85 54 aa13.3□□□□□ -0.28
EXOSC3-201ENST00000327304 C11orf68Q9H3H3 251 aaKnown RBP13.3□□□□□ -0.28
EXOSC3-201ENST00000327304 A0A0J9YWU9 116 aa13.29□□□□□ -0.28
EXOSC3-201ENST00000327304 LYRM9A8MSI8 78 aa13.29□□□□□ -0.28
EXOSC3-201ENST00000327304 TSHBP01222 138 aa13.29□□□□□ -0.28
EXOSC3-201ENST00000327304 P0DMU3 169 aa13.29□□□□□ -0.28
EXOSC3-201ENST00000327304 FAM231AP0DMU4 169 aa13.29□□□□□ -0.28
EXOSC3-201ENST00000327304 FAM231CP0DMU5 169 aa13.29□□□□□ -0.28
EXOSC3-201ENST00000327304 NEXN-AS1Q8NBZ9 246 aa13.29□□□□□ -0.28
EXOSC3-201ENST00000327304 A0A087WX48 190 aa13.29□□□□□ -0.28
EXOSC3-201ENST00000327304 DEFB130BP0DP73 79 aa13.29□□□□□ -0.28
EXOSC3-201ENST00000327304 DEFB130AP0DP74 79 aa13.29□□□□□ -0.28
EXOSC3-201ENST00000327304 LINC00612Q8N6U2 182 aa13.29□□□□□ -0.28
EXOSC3-201ENST00000327304 ZNF479Q96JC4 524 aa13.28□□□□□ -0.28
EXOSC3-201ENST00000327304 TIMM17AQ99595 171 aa13.28□□□□□ -0.28
EXOSC3-201ENST00000327304 FBN3Q75N90 2809 aa13.28□□□□□ -0.28
EXOSC3-201ENST00000327304 TMEM141Q96I45 108 aa13.27□□□□□ -0.28
EXOSC3-201ENST00000327304 TRGV2A0A075B6R0 118 aa13.27□□□□□ -0.29
EXOSC3-201ENST00000327304 TRBV10-1A0A0K0K1A3 114 aa13.27□□□□□ -0.29
EXOSC3-201ENST00000327304 IGIPA6NJ69 53 aa13.27□□□□□ -0.29
EXOSC3-201ENST00000327304 DPM2O94777 84 aa13.26□□□□□ -0.29
EXOSC3-201ENST00000327304 IGKCP01834 107 aa13.26□□□□□ -0.29
EXOSC3-201ENST00000327304 SPART-AS1P0CW21 52 aa13.26□□□□□ -0.29
EXOSC3-201ENST00000327304 BAALCQ8WXS3 180 aa13.26□□□□□ -0.29
EXOSC3-201ENST00000327304 C20orf203Q8NBC4 194 aa13.25□□□□□ -0.29
EXOSC3-201ENST00000327304 STAB2Q8WWQ8 2551 aa13.25□□□□□ -0.29
EXOSC3-201ENST00000327304 NHLRC4P0CG21 123 aaPredicted RBP13.25□□□□□ -0.29
EXOSC3-201ENST00000327304 RPL39P62891 51 aaKnown RBP13.25□□□□□ -0.29
EXOSC3-201ENST00000327304 MRPL52Q86TS9 123 aaKnown RBP13.25□□□□□ -0.29
EXOSC3-201ENST00000327304 F8VRH5 84 aa13.24□□□□□ -0.29
EXOSC3-201ENST00000327304 K7EQD1 137 aa13.24□□□□□ -0.29
EXOSC3-201ENST00000327304 PLNP26678 52 aa13.24□□□□□ -0.29
EXOSC3-201ENST00000327304 DAD1P61803 113 aa13.24□□□□□ -0.29
EXOSC3-201ENST00000327304 MRPL35Q9NZE8 188 aaKnown RBP13.24□□□□□ -0.29
EXOSC3-201ENST00000327304 Q9UF83 564 aa13.24□□□□□ -0.29
EXOSC3-201ENST00000327304 DEFB104AQ8WTQ1 72 aa13.23□□□□□ -0.29
EXOSC3-201ENST00000327304 HHLA3Q9XRX5 114 aa13.23□□□□□ -0.29
EXOSC3-201ENST00000327304 CHTOPQ9Y3Y2 248 aaKnown RBP13.23□□□□□ -0.29
EXOSC3-201ENST00000327304 TRBV7-3A0A075B6L6 115 aa13.22□□□□□ -0.29
EXOSC3-201ENST00000327304 TEX48A0A1B0GUV7 120 aa13.22□□□□□ -0.29
EXOSC3-201ENST00000327304 HNRNPA3P51991 378 aaKnown RBP13.22□□□□□ -0.29
EXOSC3-201ENST00000327304 C12orf74Q32Q52 190 aa13.22□□□□□ -0.29
EXOSC3-201ENST00000327304 COX8AP10176 69 aa13.21□□□□□ -0.29
EXOSC3-201ENST00000327304 RPL36AP83881 106 aaKnown RBP13.21□□□□□ -0.29
EXOSC3-201ENST00000327304 ANKRD39Q53RE8 183 aa13.21□□□□□ -0.29
EXOSC3-201ENST00000327304 SLC25A34Q6PIV7 304 aa13.21□□□□□ -0.29
EXOSC3-201ENST00000327304 STPG4Q8N801 248 aa13.21□□□□□ -0.29
EXOSC3-201ENST00000327304 SLC25A29Q8N8R3 303 aa13.21□□□□□ -0.29
EXOSC3-201ENST00000327304 RPL36ALQ969Q0 106 aaKnown RBP13.21□□□□□ -0.29
EXOSC3-201ENST00000327304 TRBV6-4A0A1B0GX49 114 aa13.2□□□□□ -0.3
EXOSC3-201ENST00000327304 PRSS29PA6NIE9 313 aa13.2□□□□□ -0.3
EXOSC3-201ENST00000327304 PMVKQ15126 192 aa13.2□□□□□ -0.3
EXOSC3-201ENST00000327304 MRPS16Q9Y3D3 137 aaKnown RBP13.2□□□□□ -0.3
EXOSC3-201ENST00000327304 PYGO1Q9Y3Y4 419 aa13.2□□□□□ -0.3
EXOSC3-201ENST00000327304 COTL1Q14019 142 aa13.2□□□□□ -0.3
EXOSC3-201ENST00000327304 ZNRF2Q8NHG8 242 aa13.2□□□□□ -0.3
EXOSC3-201ENST00000327304 NPSP0C0P6 89 aa13.19□□□□□ -0.3
EXOSC3-201ENST00000327304 LBHQ53QV2 105 aaPredicted RBP13.19□□□□□ -0.3
EXOSC3-201ENST00000327304 C11orf45Q8TAV5 145 aa13.19□□□□□ -0.3
EXOSC3-201ENST00000327304 M0R143 59 aa13.18□□□□□ -0.3
EXOSC3-201ENST00000327304 NANOS2P60321 138 aaKnown RBP13.18□□□□□ -0.3
EXOSC3-201ENST00000327304 DAZ4Q86SG3 579 aaKnown RBP13.18□□□□□ -0.3
EXOSC3-201ENST00000327304 CHCHD7Q9BUK0 85 aa13.18□□□□□ -0.3
EXOSC3-201ENST00000327304 DAZ3Q9NR90 486 aaKnown RBP13.18□□□□□ -0.3
EXOSC3-201ENST00000327304 TRGV4A0A0C4DH28 118 aa13.18□□□□□ -0.3
EXOSC3-201ENST00000327304 CTAG1AP78358 180 aa13.18□□□□□ -0.3
EXOSC3-201ENST00000327304 FHL2Q14192 279 aa13.18□□□□□ -0.3
EXOSC3-201ENST00000327304 PAPPA-AS1Q5QFB9 102 aa13.18□□□□□ -0.3
EXOSC3-201ENST00000327304 ZC2HC1BQ5TFG8 222 aa13.18□□□□□ -0.3
EXOSC3-201ENST00000327304 CST9LQ9H4G1 147 aa13.18□□□□□ -0.3
EXOSC3-201ENST00000327304 UBE2D3P61077 147 aa13.17□□□□□ -0.3
EXOSC3-201ENST00000327304 UBE2D2P62837 147 aa13.17□□□□□ -0.3
EXOSC3-201ENST00000327304 Q6ZTC4 211 aa13.17□□□□□ -0.3
EXOSC3-201ENST00000327304 PHLDA1Q8WV24 401 aaPredicted RBP13.17□□□□□ -0.3
EXOSC3-201ENST00000327304 ATP5G1P05496 136 aa13.16□□□□□ -0.3
EXOSC3-201ENST00000327304 CRYBA4P53673 196 aa13.16□□□□□ -0.3
EXOSC3-201ENST00000327304 IGHV3-38A0A0C4DH36 116 aa13.16□□□□□ -0.3
EXOSC3-201ENST00000327304 DLEU1O43261 78 aa13.16□□□□□ -0.3
EXOSC3-201ENST00000327304 HTN3P15516 51 aa13.16□□□□□ -0.3
EXOSC3-201ENST00000327304 SNHG12Q9BXW3 62 aa13.16□□□□□ -0.3
EXOSC3-201ENST00000327304 BOD1L2Q8IYS8 172 aa13.15□□□□□ -0.3
EXOSC3-201ENST00000327304 SPANXA1Q9NS26 97 aa13.15□□□□□ -0.3
EXOSC3-201ENST00000327304 IGLV4-3A0A075B6K6 122 aa13.14□□□□□ -0.31
EXOSC3-201ENST00000327304 FGF6P10767 208 aa13.14□□□□□ -0.31
EXOSC3-201ENST00000327304 PRADC1Q9BSG0 188 aa13.14□□□□□ -0.31
EXOSC3-201ENST00000327304 IGLV4-69A0A075B6H9 119 aa13.13□□□□□ -0.31
EXOSC3-201ENST00000327304 GAGE12JA6NER3 117 aa13.13□□□□□ -0.31
EXOSC3-201ENST00000327304 F5H768 121 aa13.13□□□□□ -0.31
EXOSC3-201ENST00000327304 EREGO14944 169 aa13.13□□□□□ -0.31
EXOSC3-201ENST00000327304 NMUP48645 174 aa13.13□□□□□ -0.31
EXOSC3-201ENST00000327304 GAGE1Q13065 139 aa13.13□□□□□ -0.31
EXOSC3-201ENST00000327304 GAGE4Q13068 117 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms