RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 TCAPO15273 167 aa7.15□□□□□ -1.26
VIPAS39-201ENST00000327028 NUPR1O60356 82 aa7.15□□□□□ -1.26
VIPAS39-201ENST00000327028 TSHBP01222 138 aa7.15□□□□□ -1.26
VIPAS39-201ENST00000327028 SNRPEP62304 92 aaKnown RBP7.15□□□□□ -1.26
VIPAS39-201ENST00000327028 ICOSQ9Y6W8 199 aa7.15□□□□□ -1.26
VIPAS39-201ENST00000327028 HSBP1O75506 76 aa7.14□□□□□ -1.27
VIPAS39-201ENST00000327028 LAGE3Q14657 143 aa7.14□□□□□ -1.27
VIPAS39-201ENST00000327028 PHLDA1Q8WV24 401 aaPredicted RBP7.14□□□□□ -1.27
VIPAS39-201ENST00000327028 IGHV3-38A0A0C4DH36 116 aa7.14□□□□□ -1.27
VIPAS39-201ENST00000327028 FCER1GP30273 86 aa7.14□□□□□ -1.27
VIPAS39-201ENST00000327028 MRPL23Q16540 153 aaKnown RBP7.14□□□□□ -1.27
VIPAS39-201ENST00000327028 ORMDL2Q53FV1 153 aa7.14□□□□□ -1.27
VIPAS39-201ENST00000327028 HIST3H2BBQ8N257 126 aa7.14□□□□□ -1.27
VIPAS39-201ENST00000327028 COTL1Q14019 142 aa7.14□□□□□ -1.27
VIPAS39-201ENST00000327028 ATP6V0E2Q8NHE4 81 aa7.14□□□□□ -1.27
VIPAS39-201ENST00000327028 IGHV1-24A0A0C4DH33 117 aa7.13□□□□□ -1.27
VIPAS39-201ENST00000327028 SH2D6Q7Z4S9 175 aa7.13□□□□□ -1.27
VIPAS39-201ENST00000327028 CBY1Q9Y3M2 126 aa7.13□□□□□ -1.27
VIPAS39-201ENST00000327028 A0A096LPF7 62 aa7.13□□□□□ -1.27
VIPAS39-201ENST00000327028 PDZD11Q5EBL8 140 aa7.13□□□□□ -1.27
VIPAS39-201ENST00000327028 AMTP48728 403 aa7.12□□□□□ -1.27
VIPAS39-201ENST00000327028 PMCHL1Q16048 86 aa7.12□□□□□ -1.27
VIPAS39-201ENST00000327028 TMEM97Q5BJF2 176 aa7.12□□□□□ -1.27
VIPAS39-201ENST00000327028 FAM19A2Q8N3H0 131 aa7.12□□□□□ -1.27
VIPAS39-201ENST00000327028 DEFB104AQ8WTQ1 72 aa7.12□□□□□ -1.27
VIPAS39-201ENST00000327028 GTSF1LQ9H1H1 148 aa7.12□□□□□ -1.27
VIPAS39-201ENST00000327028 A0A096LNJ9 63 aa7.12□□□□□ -1.27
VIPAS39-201ENST00000327028 NUDT3O95989 172 aa7.12□□□□□ -1.27
VIPAS39-201ENST00000327028 HBDP02042 147 aa7.12□□□□□ -1.27
VIPAS39-201ENST00000327028 G0S2P27469 103 aa7.11□□□□□ -1.27
VIPAS39-201ENST00000327028 PACRGQ96M98 296 aaPredicted RBP7.11□□□□□ -1.27
VIPAS39-201ENST00000327028 S100A2P29034 98 aa7.11□□□□□ -1.27
VIPAS39-201ENST00000327028 NTM-AS1Q6ZSK4 140 aa7.11□□□□□ -1.27
VIPAS39-201ENST00000327028 C15orf53Q8NAA6 179 aa7.11□□□□□ -1.27
VIPAS39-201ENST00000327028 CHCHD7Q9BUK0 85 aa7.11□□□□□ -1.27
VIPAS39-201ENST00000327028 TMEM18Q96B42 140 aa7.1□□□□□ -1.27
VIPAS39-201ENST00000327028 TRBV6-8A0A0A6YYG3 113 aa7.1□□□□□ -1.27
VIPAS39-201ENST00000327028 IFITM10A6NMD0 228 aa7.1□□□□□ -1.27
VIPAS39-201ENST00000327028 C20orf203Q8NBC4 194 aa7.1□□□□□ -1.27
VIPAS39-201ENST00000327028 HIST1H2BLQ99880 126 aa7.1□□□□□ -1.27
VIPAS39-201ENST00000327028 CYSLTR1Q9Y271 337 aa7.1□□□□□ -1.27
VIPAS39-201ENST00000327028 DYNC2H1Q8NCM8 4307 aaKnown RBP7.09□□□□□ -1.27
VIPAS39-201ENST00000327028 TRBV25-1A0A075B6N4 114 aa7.09□□□□□ -1.27
VIPAS39-201ENST00000327028 TIRAPP58753 221 aa7.09□□□□□ -1.27
VIPAS39-201ENST00000327028 C2orf66Q6UXQ4 117 aa7.09□□□□□ -1.27
VIPAS39-201ENST00000327028 TOMM6Q96B49 74 aa7.09□□□□□ -1.27
VIPAS39-201ENST00000327028 DNAH7Q8WXX0 4024 aa7.09□□□□□ -1.27
VIPAS39-201ENST00000327028 NUPR2A6NF83 97 aa7.09□□□□□ -1.27
VIPAS39-201ENST00000327028 LINC01549A6NIU2 74 aa7.09□□□□□ -1.27
VIPAS39-201ENST00000327028 CEMP1Q6PRD7 247 aaPredicted RBP7.09□□□□□ -1.27
VIPAS39-201ENST00000327028 TMEM243Q9BU79 118 aa7.09□□□□□ -1.27
VIPAS39-201ENST00000327028 FABP4P15090 132 aa7.08□□□□□ -1.28
VIPAS39-201ENST00000327028 C14orf144Q96I85 54 aa7.08□□□□□ -1.28
VIPAS39-201ENST00000327028 IGLL5B9A064 214 aa7.08□□□□□ -1.28
VIPAS39-201ENST00000327028 LEPROTL1O95214 131 aa7.08□□□□□ -1.28
VIPAS39-201ENST00000327028 RPL39P62891 51 aaKnown RBP7.08□□□□□ -1.28
VIPAS39-201ENST00000327028 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.07□□□□□ -1.28
VIPAS39-201ENST00000327028 IGKV2-29A2NJV5 120 aaPredicted RBP7.07□□□□□ -1.28
VIPAS39-201ENST00000327028 HSPB8Q9UJY1 196 aa7.07□□□□□ -1.28
VIPAS39-201ENST00000327028 H7C423 109 aa7.07□□□□□ -1.28
VIPAS39-201ENST00000327028 LELP1Q5T871 98 aa7.07□□□□□ -1.28
VIPAS39-201ENST00000327028 LYPD5Q6UWN5 251 aa7.07□□□□□ -1.28
VIPAS39-201ENST00000327028 TGP01266 2768 aa7.07□□□□□ -1.28
VIPAS39-201ENST00000327028 SCGB3A1Q96QR1 104 aa7.06□□□□□ -1.28
VIPAS39-201ENST00000327028 KLK5Q9Y337 293 aaPredicted RBP7.06□□□□□ -1.28
VIPAS39-201ENST00000327028 ATP5LO75964 103 aa7.06□□□□□ -1.28
VIPAS39-201ENST00000327028 LINC00173Q6ZV60 143 aa7.06□□□□□ -1.28
VIPAS39-201ENST00000327028 TIMM17AQ99595 171 aa7.06□□□□□ -1.28
VIPAS39-201ENST00000327028 TIMM21Q9BVV7 248 aa7.06□□□□□ -1.28
VIPAS39-201ENST00000327028 SPANXA1Q9NS26 97 aa7.06□□□□□ -1.28
VIPAS39-201ENST00000327028 UBE2L6O14933 153 aa7.05□□□□□ -1.28
VIPAS39-201ENST00000327028 ERASQ7Z444 233 aa7.05□□□□□ -1.28
VIPAS39-201ENST00000327028 MRPL52Q86TS9 123 aaKnown RBP7.05□□□□□ -1.28
VIPAS39-201ENST00000327028 CHCHD5Q9BSY4 110 aa7.05□□□□□ -1.28
VIPAS39-201ENST00000327028 UBE2D4Q9Y2X8 147 aa7.05□□□□□ -1.28
VIPAS39-201ENST00000327028 PYGO1Q9Y3Y4 419 aa7.05□□□□□ -1.28
VIPAS39-201ENST00000327028 IGIPA6NJ69 53 aa7.05□□□□□ -1.28
VIPAS39-201ENST00000327028 SMAGPQ0VAQ4 97 aa7.05□□□□□ -1.28
VIPAS39-201ENST00000327028 TMEM141Q96I45 108 aa7.05□□□□□ -1.28
VIPAS39-201ENST00000327028 NPSP0C0P6 89 aa7.04□□□□□ -1.28
VIPAS39-201ENST00000327028 FGF6P10767 208 aa7.04□□□□□ -1.28
VIPAS39-201ENST00000327028 ESRGQ1W209 222 aa7.04□□□□□ -1.28
VIPAS39-201ENST00000327028 IFI27L1Q96BM0 104 aa7.04□□□□□ -1.28
VIPAS39-201ENST00000327028 APLNQ9ULZ1 77 aa7.04□□□□□ -1.28
VIPAS39-201ENST00000327028 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.04□□□□□ -1.28
VIPAS39-201ENST00000327028 TCTAP57738 103 aa7.04□□□□□ -1.28
VIPAS39-201ENST00000327028 GAGE6Q13070 117 aa7.04□□□□□ -1.28
VIPAS39-201ENST00000327028 MAJINQ3KP22 176 aa7.04□□□□□ -1.28
VIPAS39-201ENST00000327028 OR10D4PQ8NGN7 298 aa7.04□□□□□ -1.28
VIPAS39-201ENST00000327028 WWC2-AS2Q96NR7 200 aa7.04□□□□□ -1.28
VIPAS39-201ENST00000327028 TRAV8-6A0A0B4J262 113 aa7.03□□□□□ -1.28
VIPAS39-201ENST00000327028 ZNF25P17030 456 aaPredicted RBP7.03□□□□□ -1.28
VIPAS39-201ENST00000327028 PKIAP61925 76 aa7.03□□□□□ -1.28
VIPAS39-201ENST00000327028 AMMECR1LQ6DCA0 310 aa7.03□□□□□ -1.28
VIPAS39-201ENST00000327028 SVIPQ8NHG7 77 aa7.03□□□□□ -1.28
VIPAS39-201ENST00000327028 MUC7Q8TAX7 377 aa7.03□□□□□ -1.28
VIPAS39-201ENST00000327028 CSDC2Q9Y534 153 aaKnown RBP7.03□□□□□ -1.28
VIPAS39-201ENST00000327028 MAP1LC3CQ9BXW4 147 aa7.03□□□□□ -1.28
VIPAS39-201ENST00000327028 IGLV4-3A0A075B6K6 122 aa7.02□□□□□ -1.29
VIPAS39-201ENST00000327028 C3orf79P0CE67 100 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms