RNA–Protein interactions for RNA: ENST00000318024.8

USH1C-202, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USH1C, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-202ENST00000318024 ZNRF2Q8NHG8 242 aa11.75□□□□□ -0.53
USH1C-202ENST00000318024 TIMM17AQ99595 171 aa11.75□□□□□ -0.53
USH1C-202ENST00000318024 K7EMT4 169 aa11.75□□□□□ -0.53
USH1C-202ENST00000318024 EMP1P54849 157 aa11.74□□□□□ -0.53
USH1C-202ENST00000318024 HERVK_113P61574 105 aa11.74□□□□□ -0.53
USH1C-202ENST00000318024 ZNF876PQ49A33 203 aa11.74□□□□□ -0.53
USH1C-202ENST00000318024 C4orf3Q8WVX3 66 aa11.74□□□□□ -0.53
USH1C-202ENST00000318024 TMEM141Q96I45 108 aa11.74□□□□□ -0.53
USH1C-202ENST00000318024 VCX2Q9H322 139 aa11.74□□□□□ -0.53
USH1C-202ENST00000318024 M0QXV9 152 aa11.74□□□□□ -0.53
USH1C-202ENST00000318024 RNASE4P34096 147 aaKnown RBP11.74□□□□□ -0.53
USH1C-202ENST00000318024 RPL39P62891 51 aaKnown RBP11.74□□□□□ -0.53
USH1C-202ENST00000318024 CITED2Q99967 270 aaPredicted RBP11.74□□□□□ -0.53
USH1C-202ENST00000318024 FAM110AQ9BQ89 295 aa11.74□□□□□ -0.53
USH1C-202ENST00000318024 C16orf95Q9H693 158 aa11.73□□□□□ -0.53
USH1C-202ENST00000318024 A8MWV9 139 aa11.72□□□□□ -0.53
USH1C-202ENST00000318024 F6UB75 175 aa11.72□□□□□ -0.53
USH1C-202ENST00000318024 SUMO4Q6EEV6 95 aa11.72□□□□□ -0.53
USH1C-202ENST00000318024 ANKRD29Q8N6D5 301 aa11.72□□□□□ -0.53
USH1C-202ENST00000318024 F8P00451 2351 aa11.72□□□□□ -0.53
USH1C-202ENST00000318024 ZNF688P0C7X2 276 aa11.72□□□□□ -0.53
USH1C-202ENST00000318024 JPT2Q9H910 190 aa11.72□□□□□ -0.53
USH1C-202ENST00000318024 PRO1854Q9UHT4 67 aa11.72□□□□□ -0.53
USH1C-202ENST00000318024 CYSRT1A8MQ03 144 aa11.71□□□□□ -0.53
USH1C-202ENST00000318024 KLLNB2CW77 178 aa11.71□□□□□ -0.53
USH1C-202ENST00000318024 SPXQ9BT56 116 aa11.71□□□□□ -0.53
USH1C-202ENST00000318024 TRBV6-5A0A0K0K1A5 114 aa11.71□□□□□ -0.54
USH1C-202ENST00000318024 TRBV27A0A0K0K1C4 114 aa11.71□□□□□ -0.54
USH1C-202ENST00000318024 VCYO14598 125 aa11.71□□□□□ -0.54
USH1C-202ENST00000318024 ERG28Q9UKR5 140 aa11.71□□□□□ -0.54
USH1C-202ENST00000318024 J3QQQ9 107 aa11.7□□□□□ -0.54
USH1C-202ENST00000318024 LGALS9O00182 355 aa11.7□□□□□ -0.54
USH1C-202ENST00000318024 RAX2Q96IS3 184 aa11.7□□□□□ -0.54
USH1C-202ENST00000318024 KIR2DL4Q99706 377 aa11.7□□□□□ -0.54
USH1C-202ENST00000318024 WNK1Q9H4A3 2382 aa11.7□□□□□ -0.54
USH1C-202ENST00000318024 IGHV3-33P01772 117 aa11.7□□□□□ -0.54
USH1C-202ENST00000318024 LINC01600Q96MT4 127 aa11.7□□□□□ -0.54
USH1C-202ENST00000318024 TMEM263Q8WUH6 116 aaKnown RBP11.69□□□□□ -0.54
USH1C-202ENST00000318024 CITED1Q99966 193 aa11.69□□□□□ -0.54
USH1C-202ENST00000318024 JMJD1CQ15652 2540 aa11.69□□□□□ -0.54
USH1C-202ENST00000318024 C2CD3Q4AC94 2353 aa11.69□□□□□ -0.54
USH1C-202ENST00000318024 CRLF1O75462 422 aa11.68□□□□□ -0.54
USH1C-202ENST00000318024 SDHAF1A6NFY7 115 aa11.68□□□□□ -0.54
USH1C-202ENST00000318024 TMEM170BQ5T4T1 132 aa11.68□□□□□ -0.54
USH1C-202ENST00000318024 DEFB104AQ8WTQ1 72 aa11.68□□□□□ -0.54
USH1C-202ENST00000318024 RNF183Q96D59 192 aa11.68□□□□□ -0.54
USH1C-202ENST00000318024 TMEM223A0PJW6 202 aa11.67□□□□□ -0.54
USH1C-202ENST00000318024 A4D1N5 150 aa11.67□□□□□ -0.54
USH1C-202ENST00000318024 DCANP1Q8TF63 244 aa11.67□□□□□ -0.54
USH1C-202ENST00000318024 A0A0B4J2C4 111 aa11.67□□□□□ -0.54
USH1C-202ENST00000318024 SLC25A20O43772 301 aa11.67□□□□□ -0.54
USH1C-202ENST00000318024 PROK1P58294 105 aa11.67□□□□□ -0.54
USH1C-202ENST00000318024 TMEM262E9PQX1 116 aa11.66□□□□□ -0.54
USH1C-202ENST00000318024 CCL24O00175 119 aa11.66□□□□□ -0.54
USH1C-202ENST00000318024 LEPROTO15243 131 aa11.66□□□□□ -0.54
USH1C-202ENST00000318024 NDUFA7O95182 113 aa11.66□□□□□ -0.54
USH1C-202ENST00000318024 P0DMU3 169 aa11.66□□□□□ -0.54
USH1C-202ENST00000318024 FAM231AP0DMU4 169 aa11.66□□□□□ -0.54
USH1C-202ENST00000318024 FAM231CP0DMU5 169 aa11.66□□□□□ -0.54
USH1C-202ENST00000318024 NSUN5P1Q3KNT7 163 aa11.66□□□□□ -0.54
USH1C-202ENST00000318024 KRTAP10-3P60369 221 aa11.66□□□□□ -0.54
USH1C-202ENST00000318024 HERV-K104P63124 156 aa11.66□□□□□ -0.54
USH1C-202ENST00000318024 SORL1Q92673 2214 aa11.65□□□□□ -0.54
USH1C-202ENST00000318024 A0A087WWL8 130 aa11.65□□□□□ -0.54
USH1C-202ENST00000318024 TNFRSF18Q9Y5U5 241 aa11.65□□□□□ -0.54
USH1C-202ENST00000318024 TRPT1Q86TN4 253 aaKnown RBP11.64□□□□□ -0.55
USH1C-202ENST00000318024 C9orf85Q96MD7 179 aa11.64□□□□□ -0.55
USH1C-202ENST00000318024 PEMTQ9UBM1 199 aa11.64□□□□□ -0.55
USH1C-202ENST00000318024 A0A0J9YX75 114 aa11.64□□□□□ -0.55
USH1C-202ENST00000318024 SCGB1C2P0DMR2 95 aa11.64□□□□□ -0.55
USH1C-202ENST00000318024 LGALS3P17931 250 aaKnown RBP11.64□□□□□ -0.55
USH1C-202ENST00000318024 TEP1Q99973 2627 aaKnown RBP11.64□□□□□ -0.55
USH1C-202ENST00000318024 M0QY20 66 aa11.63□□□□□ -0.55
USH1C-202ENST00000318024 NHLRC4P0CG21 123 aaPredicted RBP11.63□□□□□ -0.55
USH1C-202ENST00000318024 ZNF22P17026 224 aaPredicted RBP11.63□□□□□ -0.55
USH1C-202ENST00000318024 RHOHQ15669 191 aa11.63□□□□□ -0.55
USH1C-202ENST00000318024 OPRPNQ99935 248 aaPredicted RBP11.63□□□□□ -0.55
USH1C-202ENST00000318024 C9JAW5 83 aa11.63□□□□□ -0.55
USH1C-202ENST00000318024 ID1P41134 155 aa11.63□□□□□ -0.55
USH1C-202ENST00000318024 FAM159AQ6UWV7 190 aa11.63□□□□□ -0.55
USH1C-202ENST00000318024 MUSTN1Q8IVN3 82 aa11.63□□□□□ -0.55
USH1C-202ENST00000318024 M0R2P5 195 aa11.62□□□□□ -0.55
USH1C-202ENST00000318024 ZFAND6Q6FIF0 208 aa11.62□□□□□ -0.55
USH1C-202ENST00000318024 IGHV3-16A0A0C4DH30 117 aa11.61□□□□□ -0.55
USH1C-202ENST00000318024 ADARB2-AS1A8MUL3 147 aa11.61□□□□□ -0.55
USH1C-202ENST00000318024 K7EQG2 157 aa11.61□□□□□ -0.55
USH1C-202ENST00000318024 RHODO00212 210 aa11.61□□□□□ -0.55
USH1C-202ENST00000318024 TMEM61Q8N0U2 210 aa11.61□□□□□ -0.55
USH1C-202ENST00000318024 DYNLRB2Q8TF09 96 aa11.61□□□□□ -0.55
USH1C-202ENST00000318024 MDFICQ9P1T7 246 aa11.61□□□□□ -0.55
USH1C-202ENST00000318024 TENM1Q9UKZ4 2725 aa11.6□□□□□ -0.55
USH1C-202ENST00000318024 F5H697 171 aa11.6□□□□□ -0.55
USH1C-202ENST00000318024 IGKV3-20P01619 116 aa11.6□□□□□ -0.55
USH1C-202ENST00000318024 SNRPD3P62318 126 aaKnown RBP11.6□□□□□ -0.55
USH1C-202ENST00000318024 Q8N1Y9 231 aa11.6□□□□□ -0.55
USH1C-202ENST00000318024 C20orf203Q8NBC4 194 aa11.6□□□□□ -0.55
USH1C-202ENST00000318024 FAM104AQ969W3 186 aa11.6□□□□□ -0.55
USH1C-202ENST00000318024 LITAFQ99732 161 aa11.6□□□□□ -0.55
USH1C-202ENST00000318024 RPL13AP40429 203 aaKnown RBP11.59□□□□□ -0.55
USH1C-202ENST00000318024 LINC01620Q4KN68 170 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms