RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 DKK2Q9UBU2 259 aa14.75□□□□□ -0.05
SMCO4-201ENST00000298966 IGLV2-18A0A075B6J9 118 aa14.74□□□□□ -0.05
SMCO4-201ENST00000298966 TRBV10-1A0A0K0K1A3 114 aa14.74□□□□□ -0.05
SMCO4-201ENST00000298966 TCAPO15273 167 aa14.74□□□□□ -0.05
SMCO4-201ENST00000298966 SMIM6P0DI80 62 aa14.74□□□□□ -0.05
SMCO4-201ENST00000298966 C12orf74Q32Q52 190 aa14.74□□□□□ -0.05
SMCO4-201ENST00000298966 UBE2DNLQ8IWF7 75 aa14.74□□□□□ -0.05
SMCO4-201ENST00000298966 CELA1Q9UNI1 258 aa14.74□□□□□ -0.05
SMCO4-201ENST00000298966 IGHV1-24A0A0C4DH33 117 aa14.73□□□□□ -0.05
SMCO4-201ENST00000298966 FAM222AQ5U5X8 452 aa14.73□□□□□ -0.05
SMCO4-201ENST00000298966 SMIM2Q9BVW6 85 aa14.73□□□□□ -0.05
SMCO4-201ENST00000298966 FAM19A2Q8N3H0 131 aa14.72□□□□□ -0.05
SMCO4-201ENST00000298966 RPL39LQ96EH5 51 aaKnown RBP14.72□□□□□ -0.05
SMCO4-201ENST00000298966 Q6ZR54 194 aa14.71□□□□□ -0.05
SMCO4-201ENST00000298966 ZNF479Q96JC4 524 aa14.71□□□□□ -0.05
SMCO4-201ENST00000298966 TRBV6-4A0A1B0GX49 114 aa14.7□□□□□ -0.06
SMCO4-201ENST00000298966 VCYO14598 125 aa14.7□□□□□ -0.06
SMCO4-201ENST00000298966 MAPKAPK5-AS1Q8N8E1 139 aa14.7□□□□□ -0.06
SMCO4-201ENST00000298966 IGHV3-73A0A0B4J1V6 119 aa14.69□□□□□ -0.06
SMCO4-201ENST00000298966 K7EQD1 137 aa14.69□□□□□ -0.06
SMCO4-201ENST00000298966 G0S2P27469 103 aa14.69□□□□□ -0.06
SMCO4-201ENST00000298966 POLR2KP53803 58 aaKnown RBP14.69□□□□□ -0.06
SMCO4-201ENST00000298966 DAD1P61803 113 aa14.69□□□□□ -0.06
SMCO4-201ENST00000298966 TMEM70Q9BUB7 260 aa14.69□□□□□ -0.06
SMCO4-201ENST00000298966 TNFRSF18Q9Y5U5 241 aa14.69□□□□□ -0.06
SMCO4-201ENST00000298966 TRGV4A0A0C4DH28 118 aa14.68□□□□□ -0.06
SMCO4-201ENST00000298966 TRBV27A0A0K0K1C4 114 aa14.68□□□□□ -0.06
SMCO4-201ENST00000298966 LINC01549A6NIU2 74 aa14.68□□□□□ -0.06
SMCO4-201ENST00000298966 CDK2AP2O75956 126 aa14.68□□□□□ -0.06
SMCO4-201ENST00000298966 DEFB130BP0DP73 79 aa14.68□□□□□ -0.06
SMCO4-201ENST00000298966 DEFB130AP0DP74 79 aa14.68□□□□□ -0.06
SMCO4-201ENST00000298966 C1orf134Q5TEV5 83 aa14.68□□□□□ -0.06
SMCO4-201ENST00000298966 LRP1BQ9NZR2 4599 aa14.67□□□□□ -0.06
SMCO4-201ENST00000298966 SDHAF1A6NFY7 115 aa14.67□□□□□ -0.06
SMCO4-201ENST00000298966 JOSD1Q15040 202 aaPredicted RBP14.67□□□□□ -0.06
SMCO4-201ENST00000298966 RHOHQ15669 191 aa14.67□□□□□ -0.06
SMCO4-201ENST00000298966 ORMDL2Q53FV1 153 aa14.67□□□□□ -0.06
SMCO4-201ENST00000298966 LINC00518Q8N0U6 118 aa14.67□□□□□ -0.06
SMCO4-201ENST00000298966 KIR2DL4Q99706 377 aa14.67□□□□□ -0.06
SMCO4-201ENST00000298966 C16orf90A8MZG2 172 aa14.66□□□□□ -0.06
SMCO4-201ENST00000298966 HBDP02042 147 aa14.66□□□□□ -0.06
SMCO4-201ENST00000298966 RPL36AP83881 106 aaKnown RBP14.66□□□□□ -0.06
SMCO4-201ENST00000298966 FHL2Q14192 279 aa14.66□□□□□ -0.06
SMCO4-201ENST00000298966 PMCHL1Q16048 86 aa14.66□□□□□ -0.06
SMCO4-201ENST00000298966 PYY3Q5JQD4 70 aa14.66□□□□□ -0.06
SMCO4-201ENST00000298966 RPL36ALQ969Q0 106 aaKnown RBP14.66□□□□□ -0.06
SMCO4-201ENST00000298966 PRADC1Q9BSG0 188 aa14.66□□□□□ -0.06
SMCO4-201ENST00000298966 A0A096LNJ9 63 aa14.65□□□□□ -0.06
SMCO4-201ENST00000298966 LEPROTL1O95214 131 aa14.65□□□□□ -0.06
SMCO4-201ENST00000298966 ATP5G1P05496 136 aa14.65□□□□□ -0.06
SMCO4-201ENST00000298966 FCER1GP30273 86 aa14.65□□□□□ -0.06
SMCO4-201ENST00000298966 LAGE3Q14657 143 aa14.65□□□□□ -0.06
SMCO4-201ENST00000298966 HSPB8Q9UJY1 196 aa14.65□□□□□ -0.06
SMCO4-201ENST00000298966 I3L3M4 83 aa14.64□□□□□ -0.07
SMCO4-201ENST00000298966 Q6ZSN1 163 aa14.64□□□□□ -0.07
SMCO4-201ENST00000298966 NEXN-AS1Q8NBZ9 246 aa14.64□□□□□ -0.07
SMCO4-201ENST00000298966 TRBV7-3A0A075B6L6 115 aa14.63□□□□□ -0.07
SMCO4-201ENST00000298966 SLC25A29Q8N8R3 303 aa14.63□□□□□ -0.07
SMCO4-201ENST00000298966 PRO0255Q9UI72 69 aa14.63□□□□□ -0.07
SMCO4-201ENST00000298966 C12orf57Q99622 126 aa14.62□□□□□ -0.07
SMCO4-201ENST00000298966 C3orf79P0CE67 100 aa14.61□□□□□ -0.07
SMCO4-201ENST00000298966 KRTDAPP60985 99 aa14.61□□□□□ -0.07
SMCO4-201ENST00000298966 DAZ4Q86SG3 579 aaKnown RBP14.61□□□□□ -0.07
SMCO4-201ENST00000298966 DAZ3Q9NR90 486 aaKnown RBP14.61□□□□□ -0.07
SMCO4-201ENST00000298966 HHLA3Q9XRX5 114 aa14.61□□□□□ -0.07
SMCO4-201ENST00000298966 HERC1Q15751 4861 aa14.61□□□□□ -0.07
SMCO4-201ENST00000298966 BTF3P20290 206 aaKnown RBP14.59□□□□□ -0.07
SMCO4-201ENST00000298966 CRYBA4P53673 196 aa14.59□□□□□ -0.07
SMCO4-201ENST00000298966 Q8N1X5 172 aa14.59□□□□□ -0.07
SMCO4-201ENST00000298966 APOBP04114 4563 aaKnown RBP14.58□□□□□ -0.07
SMCO4-201ENST00000298966 TNP2Q05952 138 aa14.58□□□□□ -0.08
SMCO4-201ENST00000298966 TMEM97Q5BJF2 176 aa14.58□□□□□ -0.08
SMCO4-201ENST00000298966 ZNRF2Q8NHG8 242 aa14.58□□□□□ -0.08
SMCO4-201ENST00000298966 MAP1LC3CQ9BXW4 147 aa14.58□□□□□ -0.08
SMCO4-201ENST00000298966 SCGB1D1O95968 90 aa14.57□□□□□ -0.08
SMCO4-201ENST00000298966 NUDT3O95989 172 aa14.57□□□□□ -0.08
SMCO4-201ENST00000298966 UBE2D3P61077 147 aa14.57□□□□□ -0.08
SMCO4-201ENST00000298966 UBE2D2P62837 147 aa14.57□□□□□ -0.08
SMCO4-201ENST00000298966 LINC00173Q6ZV60 143 aa14.57□□□□□ -0.08
SMCO4-201ENST00000298966 COTL1Q14019 142 aa14.56□□□□□ -0.08
SMCO4-201ENST00000298966 H3BNG1 76 aa14.55□□□□□ -0.08
SMCO4-201ENST00000298966 SYS1-DBNDD2H3BUS1 97 aa14.55□□□□□ -0.08
SMCO4-201ENST00000298966 HTN3P15516 51 aa14.55□□□□□ -0.08
SMCO4-201ENST00000298966 PET117Q6UWS5 81 aa14.55□□□□□ -0.08
SMCO4-201ENST00000298966 NEGR1Q7Z3B1 354 aa14.55□□□□□ -0.08
SMCO4-201ENST00000298966 SH2D6Q7Z4S9 175 aa14.55□□□□□ -0.08
SMCO4-201ENST00000298966 SPATA12Q7Z6I5 190 aa14.55□□□□□ -0.08
SMCO4-201ENST00000298966 Q8N976 141 aa14.55□□□□□ -0.08
SMCO4-201ENST00000298966 PAX4O43316 350 aa14.54□□□□□ -0.08
SMCO4-201ENST00000298966 ATP5LO75964 103 aa14.54□□□□□ -0.08
SMCO4-201ENST00000298966 TSHBP01222 138 aa14.54□□□□□ -0.08
SMCO4-201ENST00000298966 LINC00694P0DN24 101 aa14.54□□□□□ -0.08
SMCO4-201ENST00000298966 TOMM6Q96B49 74 aa14.54□□□□□ -0.08
SMCO4-201ENST00000298966 CYSLTR1Q9Y271 337 aa14.54□□□□□ -0.08
SMCO4-201ENST00000298966 DNAH5Q8TE73 4624 aa14.54□□□□□ -0.08
SMCO4-201ENST00000298966 C20orf202A1L168 122 aa14.53□□□□□ -0.08
SMCO4-201ENST00000298966 GAGE12JA6NER3 117 aa14.53□□□□□ -0.08
SMCO4-201ENST00000298966 GAGE1Q13065 139 aa14.53□□□□□ -0.08
SMCO4-201ENST00000298966 GAGE4Q13068 117 aa14.53□□□□□ -0.08
SMCO4-201ENST00000298966 GAGE5Q13069 117 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms