RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 HOXB4P17483 251 aaPredicted RBP9.06□□□□□ -0.96
SYNGAP1-201ENST00000293748 C5orf38Q86SI9 138 aa9.06□□□□□ -0.96
SYNGAP1-201ENST00000293748 SIRPDQ9H106 197 aa9.06□□□□□ -0.96
SYNGAP1-201ENST00000293748 LOC400499M0QZD8 3231 aa9.06□□□□□ -0.96
SYNGAP1-201ENST00000293748 WNK1Q9H4A3 2382 aa9.05□□□□□ -0.96
SYNGAP1-201ENST00000293748 CYSRT1A8MQ03 144 aa9.05□□□□□ -0.96
SYNGAP1-201ENST00000293748 RPL39P62891 51 aaKnown RBP9.05□□□□□ -0.96
SYNGAP1-201ENST00000293748 DAZ2Q13117 558 aaKnown RBP9.05□□□□□ -0.96
SYNGAP1-201ENST00000293748 DAZ4Q86SG3 579 aaKnown RBP9.05□□□□□ -0.96
SYNGAP1-201ENST00000293748 DAZ3Q9NR90 486 aaKnown RBP9.05□□□□□ -0.96
SYNGAP1-201ENST00000293748 NDUFA11Q86Y39 141 aa9.05□□□□□ -0.96
SYNGAP1-201ENST00000293748 F8P00451 2351 aa9.05□□□□□ -0.96
SYNGAP1-201ENST00000293748 A0A096LNT2 108 aa9.05□□□□□ -0.96
SYNGAP1-201ENST00000293748 TNCP24821 2201 aa9.05□□□□□ -0.96
SYNGAP1-201ENST00000293748 Q6ZUT4 128 aa9.04□□□□□ -0.96
SYNGAP1-201ENST00000293748 TEX22C9J3V5 150 aa9.04□□□□□ -0.96
SYNGAP1-201ENST00000293748 NOP10Q9NPE3 64 aaKnown RBP9.04□□□□□ -0.96
SYNGAP1-201ENST00000293748 NBEAQ8NFP9 2946 aa9.04□□□□□ -0.96
SYNGAP1-201ENST00000293748 PRAC2D3DTV9 90 aa9.04□□□□□ -0.96
SYNGAP1-201ENST00000293748 PTH2Q96A98 100 aa9.04□□□□□ -0.96
SYNGAP1-201ENST00000293748 RAI1Q7Z5J4 1906 aaPredicted RBP9.04□□□□□ -0.96
SYNGAP1-201ENST00000293748 BOD1L1Q8NFC6 3051 aa9.04□□□□□ -0.96
SYNGAP1-201ENST00000293748 TNFRSF13BO14836 293 aaPredicted RBP9.04□□□□□ -0.96
SYNGAP1-201ENST00000293748 COX7B2Q8TF08 81 aa9.04□□□□□ -0.96
SYNGAP1-201ENST00000293748 VSIG2Q96IQ7 327 aa9.03□□□□□ -0.96
SYNGAP1-201ENST00000293748 IGLV2-8P01709 118 aa9.03□□□□□ -0.96
SYNGAP1-201ENST00000293748 IGHV4-38-2P0DP08 117 aa9.03□□□□□ -0.96
SYNGAP1-201ENST00000293748 CLPSL2Q6UWE3 100 aa9.03□□□□□ -0.96
SYNGAP1-201ENST00000293748 ZNF503Q96F45 646 aa9.03□□□□□ -0.96
SYNGAP1-201ENST00000293748 MRPL36Q9P0J6 103 aaKnown RBP9.03□□□□□ -0.96
SYNGAP1-201ENST00000293748 IGLV2-23P01705 113 aa9.03□□□□□ -0.96
SYNGAP1-201ENST00000293748 CRYGBP07316 175 aa9.03□□□□□ -0.96
SYNGAP1-201ENST00000293748 DEFB112Q30KQ8 113 aa9.03□□□□□ -0.96
SYNGAP1-201ENST00000293748 TM2D2Q9BX73 214 aa9.03□□□□□ -0.96
SYNGAP1-201ENST00000293748 IGHV1-58A0A0C4DH39 117 aa9.02□□□□□ -0.96
SYNGAP1-201ENST00000293748 MRPL23Q16540 153 aaKnown RBP9.02□□□□□ -0.96
SYNGAP1-201ENST00000293748 YPEL4Q96NS1 127 aa9.02□□□□□ -0.96
SYNGAP1-201ENST00000293748 IGLV1-47P01700 117 aa9.02□□□□□ -0.97
SYNGAP1-201ENST00000293748 C20orf203Q8NBC4 194 aa9.02□□□□□ -0.97
SYNGAP1-201ENST00000293748 AJUBAQ96IF1 538 aa9.02□□□□□ -0.97
SYNGAP1-201ENST00000293748 K7EQD1 137 aa9.02□□□□□ -0.97
SYNGAP1-201ENST00000293748 LECT2O14960 151 aa9.02□□□□□ -0.97
SYNGAP1-201ENST00000293748 Q8N1Y9 231 aa9.02□□□□□ -0.97
SYNGAP1-201ENST00000293748 RNF183Q96D59 192 aa9.02□□□□□ -0.97
SYNGAP1-201ENST00000293748 RITA1Q96K30 269 aa9.02□□□□□ -0.97
SYNGAP1-201ENST00000293748 ODF3L1Q8IXM7 274 aa9.01□□□□□ -0.97
SYNGAP1-201ENST00000293748 K7EMT4 169 aa9.01□□□□□ -0.97
SYNGAP1-201ENST00000293748 C3orf56Q8N813 242 aa9.01□□□□□ -0.97
SYNGAP1-201ENST00000293748 CLEC2BQ92478 149 aa9.01□□□□□ -0.97
SYNGAP1-201ENST00000293748 TCL1BO95988 128 aa9.01□□□□□ -0.97
SYNGAP1-201ENST00000293748 NDUFV3P56181 108 aaKnown RBP9.01□□□□□ -0.97
SYNGAP1-201ENST00000293748 MP68P56378 58 aa9.01□□□□□ -0.97
SYNGAP1-201ENST00000293748 NREPQ16612 68 aa9.01□□□□□ -0.97
SYNGAP1-201ENST00000293748 Q8N9W7 124 aa9.01□□□□□ -0.97
SYNGAP1-201ENST00000293748 VPREB3Q9UKI3 123 aa9.01□□□□□ -0.97
SYNGAP1-201ENST00000293748 A0A096LPF7 62 aa9□□□□□ -0.97
SYNGAP1-201ENST00000293748 COX7A2LO14548 114 aa9□□□□□ -0.97
SYNGAP1-201ENST00000293748 MLST8Q9BVC4 326 aa9□□□□□ -0.97
SYNGAP1-201ENST00000293748 PDE6GP18545 87 aa9□□□□□ -0.97
SYNGAP1-201ENST00000293748 SPANXB1Q9NS25 103 aaPredicted RBP9□□□□□ -0.97
SYNGAP1-201ENST00000293748 HILS1P60008 231 aa9□□□□□ -0.97
SYNGAP1-201ENST00000293748 DAND5Q8N907 189 aa9□□□□□ -0.97
SYNGAP1-201ENST00000293748 ASPMQ8IZT6 3477 aa9□□□□□ -0.97
SYNGAP1-201ENST00000293748 DEFB121Q5J5C9 76 aa9□□□□□ -0.97
SYNGAP1-201ENST00000293748 TMEM61Q8N0U2 210 aa9□□□□□ -0.97
SYNGAP1-201ENST00000293748 IGHV3-30-3P0DP02 117 aa8.99□□□□□ -0.97
SYNGAP1-201ENST00000293748 RBX1P62877 108 aa8.99□□□□□ -0.97
SYNGAP1-201ENST00000293748 GDF5OSQ5U4N7 250 aa8.99□□□□□ -0.97
SYNGAP1-201ENST00000293748 IGKV1D-37A0A075B6S9 117 aa8.99□□□□□ -0.97
SYNGAP1-201ENST00000293748 ETDCA0A1B0GVM5 59 aa8.99□□□□□ -0.97
SYNGAP1-201ENST00000293748 C5orf47Q569G3 176 aa8.99□□□□□ -0.97
SYNGAP1-201ENST00000293748 TRBV7-3A0A075B6L6 115 aa8.99□□□□□ -0.97
SYNGAP1-201ENST00000293748 E7EUB6 86 aa8.99□□□□□ -0.97
SYNGAP1-201ENST00000293748 C16orf74Q96GX8 76 aa8.99□□□□□ -0.97
SYNGAP1-201ENST00000293748 CXCL5P42830 114 aa8.98□□□□□ -0.97
SYNGAP1-201ENST00000293748 MIAQ16674 131 aa8.98□□□□□ -0.97
SYNGAP1-201ENST00000293748 UQCRQO14949 82 aa8.98□□□□□ -0.97
SYNGAP1-201ENST00000293748 Q8N7P7 452 aa8.98□□□□□ -0.97
SYNGAP1-201ENST00000293748 MT-ATP8P03928 68 aa8.98□□□□□ -0.97
SYNGAP1-201ENST00000293748 TMEM256-PLSCR3K7ERE1 68 aa8.98□□□□□ -0.97
SYNGAP1-201ENST00000293748 IGHV4-59P01825 116 aa8.97□□□□□ -0.97
SYNGAP1-201ENST00000293748 LINC00322Q6ZN03 302 aaPredicted RBP8.97□□□□□ -0.97
SYNGAP1-201ENST00000293748 DNAJC9-AS1A6NH13 148 aa8.97□□□□□ -0.97
SYNGAP1-201ENST00000293748 IGLC6P0CF74 106 aa8.97□□□□□ -0.97
SYNGAP1-201ENST00000293748 DEFB105AQ8NG35 78 aa8.97□□□□□ -0.97
SYNGAP1-201ENST00000293748 Q6YL49 198 aa8.97□□□□□ -0.97
SYNGAP1-201ENST00000293748 Q6ZQT7 251 aa8.97□□□□□ -0.97
SYNGAP1-201ENST00000293748 CAMK2N2Q96S95 79 aa8.97□□□□□ -0.97
SYNGAP1-201ENST00000293748 NAV3Q8IVL0 2385 aa8.97□□□□□ -0.97
SYNGAP1-201ENST00000293748 WDFY3Q8IZQ1 3526 aa8.97□□□□□ -0.97
SYNGAP1-201ENST00000293748 AVPP01185 164 aa8.96□□□□□ -0.97
SYNGAP1-201ENST00000293748 KRTAP1-1Q07627 177 aa8.96□□□□□ -0.97
SYNGAP1-201ENST00000293748 LAMA5O15230 3695 aa8.96□□□□□ -0.97
SYNGAP1-201ENST00000293748 MIR7-3HGQ8N6C7 128 aa8.96□□□□□ -0.98
SYNGAP1-201ENST00000293748 C5orf56Q8N8D9 126 aa8.96□□□□□ -0.98
SYNGAP1-201ENST00000293748 MDFICQ9P1T7 246 aa8.96□□□□□ -0.98
SYNGAP1-201ENST00000293748 GYPEP15421 78 aa8.96□□□□□ -0.98
SYNGAP1-201ENST00000293748 WFDC9Q8NEX5 89 aa8.96□□□□□ -0.98
SYNGAP1-201ENST00000293748 TP53TG3Q9ULZ0 132 aa8.96□□□□□ -0.98
SYNGAP1-201ENST00000293748 IGKV2D-24A0A075B6R9 120 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms