RNA–Protein interactions for RNA: ENST00000292408.8

FGFR4-201, Transcript of fibroblast growth factor receptor 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene FGFR4, Length 3,122 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-201ENST00000292408 M0QY20 66 aa12.16□□□□□ -0.46
FGFR4-201ENST00000292408 AMELXQ99217 191 aa12.16□□□□□ -0.46
FGFR4-201ENST00000292408 NF1P21359 2839 aa12.16□□□□□ -0.46
FGFR4-201ENST00000292408 IGHV3-16A0A0C4DH30 117 aa12.15□□□□□ -0.46
FGFR4-201ENST00000292408 IGHV3-38A0A0C4DH36 116 aa12.15□□□□□ -0.46
FGFR4-201ENST00000292408 LOC107984640A0A0U1RRK4 108 aa12.15□□□□□ -0.46
FGFR4-201ENST00000292408 DAND5Q8N907 189 aa12.15□□□□□ -0.46
FGFR4-201ENST00000292408 USMG5Q96IX5 58 aa12.15□□□□□ -0.46
FGFR4-201ENST00000292408 SLC25A20O43772 301 aa12.15□□□□□ -0.46
FGFR4-201ENST00000292408 NIPBLQ6KC79 2804 aaeCLIP12.15□□□□□ -0.46
FGFR4-201ENST00000292408 SNCGO76070 127 aa12.15□□□□□ -0.47
FGFR4-201ENST00000292408 KLK9Q2XQG4 91 aa12.15□□□□□ -0.47
FGFR4-201ENST00000292408 IGHV4-59P01825 116 aa12.14□□□□□ -0.47
FGFR4-201ENST00000292408 DUX3Q96PT4 197 aa12.14□□□□□ -0.47
FGFR4-201ENST00000292408 ZNF22P17026 224 aaPredicted RBP12.14□□□□□ -0.47
FGFR4-201ENST00000292408 PAPPA-AS1Q5QFB9 102 aa12.14□□□□□ -0.47
FGFR4-201ENST00000292408 NTN5Q8WTR8 489 aaPredicted RBP12.14□□□□□ -0.47
FGFR4-201ENST00000292408 TMEM141Q96I45 108 aa12.14□□□□□ -0.47
FGFR4-201ENST00000292408 TEX15Q9BXT5 2789 aa12.13□□□□□ -0.47
FGFR4-201ENST00000292408 TRBV27A0A0K0K1C4 114 aa12.13□□□□□ -0.47
FGFR4-201ENST00000292408 TIMM17AQ99595 171 aa12.13□□□□□ -0.47
FGFR4-201ENST00000292408 CD28P10747 220 aa12.13□□□□□ -0.47
FGFR4-201ENST00000292408 IFITM1P13164 125 aa12.13□□□□□ -0.47
FGFR4-201ENST00000292408 DEFB136Q30KP8 78 aa12.12□□□□□ -0.47
FGFR4-201ENST00000292408 A6NDX4 124 aa12.12□□□□□ -0.47
FGFR4-201ENST00000292408 IGHV3-33P01772 117 aa12.12□□□□□ -0.47
FGFR4-201ENST00000292408 IGHV1OR15-1A0A075B7D0 117 aa12.11□□□□□ -0.47
FGFR4-201ENST00000292408 RHODO00212 210 aa12.11□□□□□ -0.47
FGFR4-201ENST00000292408 MED14OSP0DP75 135 aa12.11□□□□□ -0.47
FGFR4-201ENST00000292408 LYRM7Q5U5X0 104 aa12.11□□□□□ -0.47
FGFR4-201ENST00000292408 TEX49A0A1B0GTD5 131 aa12.11□□□□□ -0.47
FGFR4-201ENST00000292408 TMEM223A0PJW6 202 aa12.11□□□□□ -0.47
FGFR4-201ENST00000292408 IGLV4-3A0A075B6K6 122 aa12.11□□□□□ -0.47
FGFR4-201ENST00000292408 NXPH4O95158 308 aa12.11□□□□□ -0.47
FGFR4-201ENST00000292408 C20orf203Q8NBC4 194 aa12.11□□□□□ -0.47
FGFR4-201ENST00000292408 ZNF625Q96I27 306 aaPredicted RBP12.11□□□□□ -0.47
FGFR4-201ENST00000292408 PIMREGQ9BSJ6 248 aa12.11□□□□□ -0.47
FGFR4-201ENST00000292408 DOPEY1Q5JWR5 2465 aa12.1□□□□□ -0.47
FGFR4-201ENST00000292408 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.1□□□□□ -0.47
FGFR4-201ENST00000292408 IGKV2-29A2NJV5 120 aaPredicted RBP12.1□□□□□ -0.47
FGFR4-201ENST00000292408 LGALS9O00182 355 aa12.1□□□□□ -0.47
FGFR4-201ENST00000292408 APRG1Q8IVJ8 170 aa12.1□□□□□ -0.47
FGFR4-201ENST00000292408 CCL19Q99731 98 aa12.1□□□□□ -0.47
FGFR4-201ENST00000292408 A0A0J9YX75 114 aa12.1□□□□□ -0.47
FGFR4-201ENST00000292408 SNRPD3P62318 126 aaKnown RBP12.1□□□□□ -0.47
FGFR4-201ENST00000292408 ADAMTSL4-AS1Q5T5F5 129 aa12.09□□□□□ -0.47
FGFR4-201ENST00000292408 FN1P02751 2386 aaKnown RBP12.09□□□□□ -0.47
FGFR4-201ENST00000292408 PIEZO1Q92508 2521 aa12.09□□□□□ -0.47
FGFR4-201ENST00000292408 IGHV3-30-3P0DP02 117 aa12.09□□□□□ -0.47
FGFR4-201ENST00000292408 LEPROTO15243 131 aa12.09□□□□□ -0.47
FGFR4-201ENST00000292408 RBMY1A1P0DJD3 496 aaKnown RBP12.09□□□□□ -0.47
FGFR4-201ENST00000292408 RBMY1CP0DJD4 496 aa12.09□□□□□ -0.47
FGFR4-201ENST00000292408 RBMY1FQ15415 496 aaKnown RBP12.09□□□□□ -0.47
FGFR4-201ENST00000292408 TMEM263Q8WUH6 116 aaKnown RBP12.09□□□□□ -0.47
FGFR4-201ENST00000292408 A0A0J9YXY3 114 aa12.08□□□□□ -0.48
FGFR4-201ENST00000292408 CHCHD5Q9BSY4 110 aa12.08□□□□□ -0.48
FGFR4-201ENST00000292408 I3L3M4 83 aa12.08□□□□□ -0.48
FGFR4-201ENST00000292408 IGLV1-40P01703 118 aa12.08□□□□□ -0.48
FGFR4-201ENST00000292408 ATP6V0E2Q8NHE4 81 aa12.08□□□□□ -0.48
FGFR4-201ENST00000292408 CLEC2BQ92478 149 aa12.08□□□□□ -0.48
FGFR4-201ENST00000292408 C9orf85Q96MD7 179 aa12.08□□□□□ -0.48
FGFR4-201ENST00000292408 CSDC2Q9Y534 153 aaKnown RBP12.08□□□□□ -0.48
FGFR4-201ENST00000292408 DEFB112Q30KQ8 113 aa12.07□□□□□ -0.48
FGFR4-201ENST00000292408 C18orf65Q6ZTR6 163 aa12.07□□□□□ -0.48
FGFR4-201ENST00000292408 TIMM21Q9BVV7 248 aa12.07□□□□□ -0.48
FGFR4-201ENST00000292408 Q6ZSN1 163 aa12.07□□□□□ -0.48
FGFR4-201ENST00000292408 POM121L12Q8N7R1 296 aa12.07□□□□□ -0.48
FGFR4-201ENST00000292408 TRIAP1O43715 76 aa12.06□□□□□ -0.48
FGFR4-201ENST00000292408 IGHV3OR16-12A0A075B7B8 117 aa12.06□□□□□ -0.48
FGFR4-201ENST00000292408 MSMBP08118 114 aa12.06□□□□□ -0.48
FGFR4-201ENST00000292408 LINC00694P0DN24 101 aa12.06□□□□□ -0.48
FGFR4-201ENST00000292408 DEFB131AP59861 70 aa12.06□□□□□ -0.48
FGFR4-201ENST00000292408 KHDC1LQ5JSQ8 128 aa12.06□□□□□ -0.48
FGFR4-201ENST00000292408 MTORP42345 2549 aa12.05□□□□□ -0.48
FGFR4-201ENST00000292408 C10orf105Q8TEF2 133 aa12.05□□□□□ -0.48
FGFR4-201ENST00000292408 IGSF10Q6WRI0 2623 aa12.04□□□□□ -0.48
FGFR4-201ENST00000292408 NDUFA12Q9UI09 145 aa12.04□□□□□ -0.48
FGFR4-201ENST00000292408 LINC01620Q4KN68 170 aa12.04□□□□□ -0.48
FGFR4-201ENST00000292408 TRBV6-5A0A0K0K1A5 114 aa12.04□□□□□ -0.48
FGFR4-201ENST00000292408 KLK5Q9Y337 293 aaPredicted RBP12.04□□□□□ -0.48
FGFR4-201ENST00000292408 UCNP55089 124 aa12.03□□□□□ -0.48
FGFR4-201ENST00000292408 K7EQG2 157 aa12.03□□□□□ -0.48
FGFR4-201ENST00000292408 ZNF462Q96JM2 2506 aa12.03□□□□□ -0.48
FGFR4-201ENST00000292408 SLURP1P55000 103 aa12.02□□□□□ -0.48
FGFR4-201ENST00000292408 NSUN5P1Q3KNT7 163 aa12.02□□□□□ -0.48
FGFR4-201ENST00000292408 PSMB8P28062 276 aa12.02□□□□□ -0.49
FGFR4-201ENST00000292408 HOXD3P31249 432 aaPredicted RBP12.02□□□□□ -0.49
FGFR4-201ENST00000292408 RHOHQ15669 191 aa12.02□□□□□ -0.49
FGFR4-201ENST00000292408 C15orf53Q8NAA6 179 aa12.01□□□□□ -0.49
FGFR4-201ENST00000292408 NDUFA7O95182 113 aa12.01□□□□□ -0.49
FGFR4-201ENST00000292408 H3BUA1 57 aa12□□□□□ -0.49
FGFR4-201ENST00000292408 M0R2P5 195 aa12□□□□□ -0.49
FGFR4-201ENST00000292408 C2orf82Q6UX34 121 aa12□□□□□ -0.49
FGFR4-201ENST00000292408 FAM104AQ969W3 186 aa12□□□□□ -0.49
FGFR4-201ENST00000292408 ACANP16112 2415 aa12□□□□□ -0.49
FGFR4-201ENST00000292408 ATXN8Q156A1 80 aa12□□□□□ -0.49
FGFR4-201ENST00000292408 C11orf44Q8N8P7 122 aa12□□□□□ -0.49
FGFR4-201ENST00000292408 K7EMT4 169 aa12□□□□□ -0.49
FGFR4-201ENST00000292408 CFHR3Q02985 330 aa12□□□□□ -0.49
FGFR4-201ENST00000292408 C5orf47Q569G3 176 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms