RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 Q8NAQ8 132 aa12.36□□□□□ -0.43
SRSF1-201ENST00000258962 TOMM6Q96B49 74 aa12.36□□□□□ -0.43
SRSF1-201ENST00000258962 C18orf15Q96N68 181 aa12.36□□□□□ -0.43
SRSF1-201ENST00000258962 UQCR10Q9UDW1 63 aa12.36□□□□□ -0.43
SRSF1-201ENST00000258962 TSHBP01222 138 aa12.35□□□□□ -0.43
SRSF1-201ENST00000258962 Q6ZN92 141 aa12.35□□□□□ -0.43
SRSF1-201ENST00000258962 DNAJC30Q96LL9 226 aa12.35□□□□□ -0.43
SRSF1-201ENST00000258962 SCGB3A1Q96QR1 104 aa12.34□□□□□ -0.43
SRSF1-201ENST00000258962 CYSLTR1Q9Y271 337 aa12.34□□□□□ -0.43
SRSF1-201ENST00000258962 TNFRSF18Q9Y5U5 241 aa12.34□□□□□ -0.43
SRSF1-201ENST00000258962 I3L3M4 83 aa12.33□□□□□ -0.44
SRSF1-201ENST00000258962 K7EQD1 137 aa12.33□□□□□ -0.44
SRSF1-201ENST00000258962 DEFB4AO15263 64 aa12.33□□□□□ -0.44
SRSF1-201ENST00000258962 MIFP14174 115 aa12.33□□□□□ -0.44
SRSF1-201ENST00000258962 RHOHQ15669 191 aa12.33□□□□□ -0.44
SRSF1-201ENST00000258962 MRPL52Q86TS9 123 aaKnown RBP12.33□□□□□ -0.44
SRSF1-201ENST00000258962 SLC25A29Q8N8R3 303 aa12.33□□□□□ -0.44
SRSF1-201ENST00000258962 A0A0J9YWU9 116 aa12.32□□□□□ -0.44
SRSF1-201ENST00000258962 DEFB130BP0DP73 79 aa12.32□□□□□ -0.44
SRSF1-201ENST00000258962 DEFB130AP0DP74 79 aa12.32□□□□□ -0.44
SRSF1-201ENST00000258962 FAM222AQ5U5X8 452 aa12.32□□□□□ -0.44
SRSF1-201ENST00000258962 C2orf66Q6UXQ4 117 aa12.32□□□□□ -0.44
SRSF1-201ENST00000258962 LYRM9A8MSI8 78 aa12.32□□□□□ -0.44
SRSF1-201ENST00000258962 IGLC3P0DOY3 106 aa12.32□□□□□ -0.44
SRSF1-201ENST00000258962 FHL2Q14192 279 aa12.32□□□□□ -0.44
SRSF1-201ENST00000258962 ERASQ7Z444 233 aa12.32□□□□□ -0.44
SRSF1-201ENST00000258962 TRAV12-1A0A0B4J245 112 aa12.31□□□□□ -0.44
SRSF1-201ENST00000258962 TRBV10-1A0A0K0K1A3 114 aa12.31□□□□□ -0.44
SRSF1-201ENST00000258962 TMEM141Q96I45 108 aa12.31□□□□□ -0.44
SRSF1-201ENST00000258962 DKK2Q9UBU2 259 aa12.31□□□□□ -0.44
SRSF1-201ENST00000258962 ZFAND6Q6FIF0 208 aa12.3□□□□□ -0.44
SRSF1-201ENST00000258962 PMCHL2Q9BQD1 86 aa12.3□□□□□ -0.44
SRSF1-201ENST00000258962 TRGV4A0A0C4DH28 118 aa12.29□□□□□ -0.44
SRSF1-201ENST00000258962 TRBV6-4A0A1B0GX49 114 aa12.29□□□□□ -0.44
SRSF1-201ENST00000258962 RPL39P62891 51 aaKnown RBP12.29□□□□□ -0.44
SRSF1-201ENST00000258962 LBHQ53QV2 105 aaPredicted RBP12.29□□□□□ -0.44
SRSF1-201ENST00000258962 CASC10Q5T4H9 136 aa12.29□□□□□ -0.44
SRSF1-201ENST00000258962 ZNRF2Q8NHG8 242 aa12.29□□□□□ -0.44
SRSF1-201ENST00000258962 CELA1Q9UNI1 258 aa12.29□□□□□ -0.44
SRSF1-201ENST00000258962 TRBV7-3A0A075B6L6 115 aa12.28□□□□□ -0.44
SRSF1-201ENST00000258962 IGHV3-38A0A0C4DH36 116 aa12.28□□□□□ -0.44
SRSF1-201ENST00000258962 DPM2O94777 84 aa12.28□□□□□ -0.44
SRSF1-201ENST00000258962 ODF1Q14990 250 aa12.28□□□□□ -0.44
SRSF1-201ENST00000258962 PHLDA1Q8WV24 401 aaPredicted RBP12.28□□□□□ -0.44
SRSF1-201ENST00000258962 C14orf144Q96I85 54 aa12.28□□□□□ -0.44
SRSF1-201ENST00000258962 A0A087WX48 190 aa12.27□□□□□ -0.44
SRSF1-201ENST00000258962 PLNP26678 52 aa12.27□□□□□ -0.44
SRSF1-201ENST00000258962 RPL36AP83881 106 aaKnown RBP12.27□□□□□ -0.44
SRSF1-201ENST00000258962 RPL36ALQ969Q0 106 aaKnown RBP12.27□□□□□ -0.44
SRSF1-201ENST00000258962 LOC100131303A0A0U1RQF7 123 aa12.27□□□□□ -0.45
SRSF1-201ENST00000258962 hDV102S1A0JD36 115 aa12.27□□□□□ -0.45
SRSF1-201ENST00000258962 IGKCP01834 107 aa12.27□□□□□ -0.45
SRSF1-201ENST00000258962 HNRNPA3P51991 378 aaKnown RBP12.27□□□□□ -0.45
SRSF1-201ENST00000258962 MAJINQ3KP22 176 aa12.27□□□□□ -0.45
SRSF1-201ENST00000258962 C20orf203Q8NBC4 194 aa12.27□□□□□ -0.45
SRSF1-201ENST00000258962 TIMM17AQ99595 171 aa12.27□□□□□ -0.45
SRSF1-201ENST00000258962 C11orf68Q9H3H3 251 aaKnown RBP12.27□□□□□ -0.45
SRSF1-201ENST00000258962 GAGE12JA6NER3 117 aa12.26□□□□□ -0.45
SRSF1-201ENST00000258962 IGIPA6NJ69 53 aa12.26□□□□□ -0.45
SRSF1-201ENST00000258962 UBE2D3P61077 147 aa12.26□□□□□ -0.45
SRSF1-201ENST00000258962 UBE2D2P62837 147 aa12.26□□□□□ -0.45
SRSF1-201ENST00000258962 GAGE1Q13065 139 aa12.26□□□□□ -0.45
SRSF1-201ENST00000258962 GAGE4Q13068 117 aa12.26□□□□□ -0.45
SRSF1-201ENST00000258962 GAGE5Q13069 117 aa12.26□□□□□ -0.45
SRSF1-201ENST00000258962 GAGE13Q4V321 117 aa12.26□□□□□ -0.45
SRSF1-201ENST00000258962 PAPPA-AS1Q5QFB9 102 aa12.26□□□□□ -0.45
SRSF1-201ENST00000258962 SLC25A34Q6PIV7 304 aa12.26□□□□□ -0.45
SRSF1-201ENST00000258962 M0R143 59 aa12.25□□□□□ -0.45
SRSF1-201ENST00000258962 CHCHD7Q9BUK0 85 aa12.25□□□□□ -0.45
SRSF1-201ENST00000258962 COTL1Q14019 142 aa12.24□□□□□ -0.45
SRSF1-201ENST00000258962 BAALCQ8WXS3 180 aa12.24□□□□□ -0.45
SRSF1-201ENST00000258962 MRPS16Q9Y3D3 137 aaKnown RBP12.24□□□□□ -0.45
SRSF1-201ENST00000258962 CHTOPQ9Y3Y2 248 aaKnown RBP12.24□□□□□ -0.45
SRSF1-201ENST00000258962 F8VRH5 84 aa12.23□□□□□ -0.45
SRSF1-201ENST00000258962 NPSP0C0P6 89 aa12.23□□□□□ -0.45
SRSF1-201ENST00000258962 SPART-AS1P0CW21 52 aa12.23□□□□□ -0.45
SRSF1-201ENST00000258962 LINC00694P0DN24 101 aa12.23□□□□□ -0.45
SRSF1-201ENST00000258962 DAD1P61803 113 aa12.23□□□□□ -0.45
SRSF1-201ENST00000258962 C11orf45Q8TAV5 145 aa12.23□□□□□ -0.45
SRSF1-201ENST00000258962 HHLA3Q9XRX5 114 aa12.23□□□□□ -0.45
SRSF1-201ENST00000258962 CRYBA4P53673 196 aa12.22□□□□□ -0.45
SRSF1-201ENST00000258962 DAZ4Q86SG3 579 aaKnown RBP12.22□□□□□ -0.45
SRSF1-201ENST00000258962 PRADC1Q9BSG0 188 aa12.22□□□□□ -0.45
SRSF1-201ENST00000258962 DAZ3Q9NR90 486 aaKnown RBP12.22□□□□□ -0.45
SRSF1-201ENST00000258962 COX8AP10176 69 aa12.21□□□□□ -0.45
SRSF1-201ENST00000258962 SMAGPQ0VAQ4 97 aa12.21□□□□□ -0.46
SRSF1-201ENST00000258962 PMVKQ15126 192 aa12.21□□□□□ -0.46
SRSF1-201ENST00000258962 NTM-AS1Q6ZSK4 140 aa12.21□□□□□ -0.46
SRSF1-201ENST00000258962 MRPL35Q9NZE8 188 aaKnown RBP12.21□□□□□ -0.46
SRSF1-201ENST00000258962 PRO0255Q9UI72 69 aa12.2□□□□□ -0.46
SRSF1-201ENST00000258962 PYGO1Q9Y3Y4 419 aa12.2□□□□□ -0.46
SRSF1-201ENST00000258962 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.19□□□□□ -0.46
SRSF1-201ENST00000258962 IGKV2-29A2NJV5 120 aaPredicted RBP12.19□□□□□ -0.46
SRSF1-201ENST00000258962 NANOS2P60321 138 aaKnown RBP12.19□□□□□ -0.46
SRSF1-201ENST00000258962 ZC2HC1BQ5TFG8 222 aa12.19□□□□□ -0.46
SRSF1-201ENST00000258962 FAM104AQ969W3 186 aa12.19□□□□□ -0.46
SRSF1-201ENST00000258962 OPRPNQ99935 248 aaPredicted RBP12.19□□□□□ -0.46
SRSF1-201ENST00000258962 NUPR2A6NF83 97 aa12.18□□□□□ -0.46
SRSF1-201ENST00000258962 PRSS29PA6NIE9 313 aa12.18□□□□□ -0.46
SRSF1-201ENST00000258962 DLEU1O43261 78 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms