RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 RHODO00212 210 aa9.38□□□□□ -0.91
PHGDH-221ENST00000641573 Q8N8P6 123 aa9.38□□□□□ -0.91
PHGDH-221ENST00000641573 AP5S1Q9NUS5 200 aa9.38□□□□□ -0.91
PHGDH-221ENST00000641573 M0QY20 66 aa9.37□□□□□ -0.91
PHGDH-221ENST00000641573 EMP1P54849 157 aa9.37□□□□□ -0.91
PHGDH-221ENST00000641573 SUMO2P61956 95 aaKnown RBP9.37□□□□□ -0.91
PHGDH-221ENST00000641573 OR4C5Q8NGB2 326 aa9.37□□□□□ -0.91
PHGDH-221ENST00000641573 OR11H2Q8NH07 326 aa9.37□□□□□ -0.91
PHGDH-221ENST00000641573 RNF183Q96D59 192 aa9.37□□□□□ -0.91
PHGDH-221ENST00000641573 C20orf78Q9BR46 151 aa9.37□□□□□ -0.91
PHGDH-221ENST00000641573 NXT2Q9NPJ8 142 aaKnown RBP9.37□□□□□ -0.91
PHGDH-221ENST00000641573 IGLV2-18A0A075B6J9 118 aa9.36□□□□□ -0.91
PHGDH-221ENST00000641573 IGHV1-24A0A0C4DH33 117 aa9.36□□□□□ -0.91
PHGDH-221ENST00000641573 PMCHL1Q16048 86 aa9.36□□□□□ -0.91
PHGDH-221ENST00000641573 ZFP2Q6ZN57 461 aa9.36□□□□□ -0.91
PHGDH-221ENST00000641573 Q6ZWC4 215 aa9.36□□□□□ -0.91
PHGDH-221ENST00000641573 ST20Q9HBF5 79 aa9.36□□□□□ -0.91
PHGDH-221ENST00000641573 TRAV4A0A0B4J268 109 aa9.35□□□□□ -0.91
PHGDH-221ENST00000641573 GAGE12BA1L429 117 aa9.35□□□□□ -0.91
PHGDH-221ENST00000641573 LINC01546A6NGU7 62 aa9.35□□□□□ -0.91
PHGDH-221ENST00000641573 H7C1H1 209 aa9.35□□□□□ -0.91
PHGDH-221ENST00000641573 GAGE7O76087 117 aa9.35□□□□□ -0.91
PHGDH-221ENST00000641573 GAGE12FP0CL80 117 aa9.35□□□□□ -0.91
PHGDH-221ENST00000641573 GAGE12GP0CL81 117 aa9.35□□□□□ -0.91
PHGDH-221ENST00000641573 GAGE12IP0CL82 117 aa9.35□□□□□ -0.91
PHGDH-221ENST00000641573 SMIM2Q9BVW6 85 aa9.35□□□□□ -0.91
PHGDH-221ENST00000641573 EDA2RQ9HAV5 297 aa9.35□□□□□ -0.91
PHGDH-221ENST00000641573 TRBV6-5A0A0K0K1A5 114 aa9.34□□□□□ -0.91
PHGDH-221ENST00000641573 Q6ZSN1 163 aa9.34□□□□□ -0.91
PHGDH-221ENST00000641573 ZNF479Q96JC4 524 aa9.34□□□□□ -0.91
PHGDH-221ENST00000641573 NIT2Q9NQR4 276 aa9.34□□□□□ -0.91
PHGDH-221ENST00000641573 DYNC2H1Q8NCM8 4307 aaKnown RBP9.34□□□□□ -0.91
PHGDH-221ENST00000641573 TRGV2A0A075B6R0 118 aa9.33□□□□□ -0.92
PHGDH-221ENST00000641573 IGHV4-28A0A0C4DH34 117 aa9.33□□□□□ -0.92
PHGDH-221ENST00000641573 IGHV3-53P01767 116 aa9.33□□□□□ -0.92
PHGDH-221ENST00000641573 MIFP14174 115 aa9.33□□□□□ -0.92
PHGDH-221ENST00000641573 RPL32P62910 135 aaKnown RBP9.33□□□□□ -0.92
PHGDH-221ENST00000641573 VCYO14598 125 aa9.32□□□□□ -0.92
PHGDH-221ENST00000641573 TCAPO15273 167 aa9.32□□□□□ -0.92
PHGDH-221ENST00000641573 P0DMU3 169 aa9.32□□□□□ -0.92
PHGDH-221ENST00000641573 FAM231AP0DMU4 169 aa9.32□□□□□ -0.92
PHGDH-221ENST00000641573 FAM231CP0DMU5 169 aa9.32□□□□□ -0.92
PHGDH-221ENST00000641573 POLR2KP53803 58 aaKnown RBP9.32□□□□□ -0.92
PHGDH-221ENST00000641573 LINC00612Q8N6U2 182 aa9.32□□□□□ -0.92
PHGDH-221ENST00000641573 TMEM70Q9BUB7 260 aa9.32□□□□□ -0.92
PHGDH-221ENST00000641573 HUWE1Q7Z6Z7 4374 aaKnown RBP9.31□□□□□ -0.92
PHGDH-221ENST00000641573 A0A096LNJ9 63 aa9.31□□□□□ -0.92
PHGDH-221ENST00000641573 SDHAF1A6NFY7 115 aa9.31□□□□□ -0.92
PHGDH-221ENST00000641573 LYRM9A8MSI8 78 aa9.31□□□□□ -0.92
PHGDH-221ENST00000641573 DEFB4AO15263 64 aa9.31□□□□□ -0.92
PHGDH-221ENST00000641573 CIDEAO60543 219 aa9.31□□□□□ -0.92
PHGDH-221ENST00000641573 LEPROTL1O95214 131 aa9.31□□□□□ -0.92
PHGDH-221ENST00000641573 HBDP02042 147 aa9.31□□□□□ -0.92
PHGDH-221ENST00000641573 LAGE3Q14657 143 aa9.31□□□□□ -0.92
PHGDH-221ENST00000641573 NEGR1Q7Z3B1 354 aa9.31□□□□□ -0.92
PHGDH-221ENST00000641573 Q8NAQ8 132 aa9.31□□□□□ -0.92
PHGDH-221ENST00000641573 TP53TG1Q9Y2A0 90 aa9.31□□□□□ -0.92
PHGDH-221ENST00000641573 SMIM6P0DI80 62 aa9.3□□□□□ -0.92
PHGDH-221ENST00000641573 DEFB130BP0DP73 79 aa9.3□□□□□ -0.92
PHGDH-221ENST00000641573 DEFB130AP0DP74 79 aa9.3□□□□□ -0.92
PHGDH-221ENST00000641573 FCER1GP30273 86 aa9.3□□□□□ -0.92
PHGDH-221ENST00000641573 KRTDAPP60985 99 aa9.3□□□□□ -0.92
PHGDH-221ENST00000641573 JOSD1Q15040 202 aaPredicted RBP9.3□□□□□ -0.92
PHGDH-221ENST00000641573 PYY3Q5JQD4 70 aa9.3□□□□□ -0.92
PHGDH-221ENST00000641573 FAM222AQ5U5X8 452 aa9.3□□□□□ -0.92
PHGDH-221ENST00000641573 LINC00173Q6ZV60 143 aa9.3□□□□□ -0.92
PHGDH-221ENST00000641573 DNAJC30Q96LL9 226 aa9.3□□□□□ -0.92
PHGDH-221ENST00000641573 RETNQ9HD89 108 aa9.3□□□□□ -0.92
PHGDH-221ENST00000641573 HSPB8Q9UJY1 196 aa9.3□□□□□ -0.92
PHGDH-221ENST00000641573 TNFRSF18Q9Y5U5 241 aa9.3□□□□□ -0.92
PHGDH-221ENST00000641573 TRBV27A0A0K0K1C4 114 aa9.29□□□□□ -0.92
PHGDH-221ENST00000641573 K7EMI3 77 aa9.29□□□□□ -0.92
PHGDH-221ENST00000641573 C3orf79P0CE67 100 aa9.29□□□□□ -0.92
PHGDH-221ENST00000641573 ORMDL2Q53FV1 153 aa9.29□□□□□ -0.92
PHGDH-221ENST00000641573 LINC00518Q8N0U6 118 aa9.29□□□□□ -0.92
PHGDH-221ENST00000641573 NEXN-AS1Q8NBZ9 246 aa9.29□□□□□ -0.92
PHGDH-221ENST00000641573 C18orf15Q96N68 181 aa9.29□□□□□ -0.92
PHGDH-221ENST00000641573 DKK2Q9UBU2 259 aa9.29□□□□□ -0.92
PHGDH-221ENST00000641573 SACSQ9NZJ4 4579 aa9.28□□□□□ -0.92
PHGDH-221ENST00000641573 K7EQD1 137 aa9.28□□□□□ -0.92
PHGDH-221ENST00000641573 NUDT3O95989 172 aa9.28□□□□□ -0.92
PHGDH-221ENST00000641573 KIR2DL4Q99706 377 aa9.28□□□□□ -0.92
PHGDH-221ENST00000641573 Q9UF83 564 aa9.28□□□□□ -0.92
PHGDH-221ENST00000641573 NACAE9PAV3 2078 aa9.28□□□□□ -0.92
PHGDH-221ENST00000641573 TRGV4A0A0C4DH28 118 aa9.27□□□□□ -0.93
PHGDH-221ENST00000641573 TRBV10-1A0A0K0K1A3 114 aa9.27□□□□□ -0.93
PHGDH-221ENST00000641573 I3L3M4 83 aa9.27□□□□□ -0.93
PHGDH-221ENST00000641573 SCGB1D1O95968 90 aa9.27□□□□□ -0.93
PHGDH-221ENST00000641573 BTF3P20290 206 aaKnown RBP9.27□□□□□ -0.93
PHGDH-221ENST00000641573 FHL2Q14192 279 aa9.27□□□□□ -0.93
PHGDH-221ENST00000641573 ZFAND6Q6FIF0 208 aa9.27□□□□□ -0.93
PHGDH-221ENST00000641573 SLC25A29Q8N8R3 303 aa9.27□□□□□ -0.93
PHGDH-221ENST00000641573 DEFB104AQ8WTQ1 72 aa9.27□□□□□ -0.93
PHGDH-221ENST00000641573 C12orf57Q99622 126 aa9.27□□□□□ -0.93
PHGDH-221ENST00000641573 TSHBP01222 138 aa9.26□□□□□ -0.93
PHGDH-221ENST00000641573 SPART-AS1P0CW21 52 aa9.26□□□□□ -0.93
PHGDH-221ENST00000641573 MAP1LC3CQ9BXW4 147 aa9.26□□□□□ -0.93
PHGDH-221ENST00000641573 CELA1Q9UNI1 258 aa9.26□□□□□ -0.93
PHGDH-221ENST00000641573 TRBV6-4A0A1B0GX49 114 aa9.25□□□□□ -0.93
PHGDH-221ENST00000641573 DAD1P61803 113 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms