RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 FAM110AQ9BQ89 295 aa6.48□□□□□ -1.37
PHGDH-219ENST00000641513 MDFICQ9P1T7 246 aa6.48□□□□□ -1.37
PHGDH-219ENST00000641513 LCE2BO14633 110 aa6.47□□□□□ -1.37
PHGDH-219ENST00000641513 TAX1BP3O14907 124 aa6.47□□□□□ -1.37
PHGDH-219ENST00000641513 DPM2O94777 84 aa6.47□□□□□ -1.37
PHGDH-219ENST00000641513 PRM2P04554 102 aa6.47□□□□□ -1.37
PHGDH-219ENST00000641513 PLNP26678 52 aa6.47□□□□□ -1.37
PHGDH-219ENST00000641513 ZNF415Q09FC8 603 aa6.47□□□□□ -1.37
PHGDH-219ENST00000641513 ANKRD39Q53RE8 183 aa6.47□□□□□ -1.37
PHGDH-219ENST00000641513 C14orf178Q8N769 122 aaPredicted RBP6.47□□□□□ -1.37
PHGDH-219ENST00000641513 C19orf73Q9NVV2 129 aa6.47□□□□□ -1.37
PHGDH-219ENST00000641513 A0A087WX48 190 aa6.46□□□□□ -1.38
PHGDH-219ENST00000641513 K7EP13 123 aa6.46□□□□□ -1.38
PHGDH-219ENST00000641513 IGKCP01834 107 aa6.46□□□□□ -1.38
PHGDH-219ENST00000641513 SUMO2P61956 95 aaKnown RBP6.46□□□□□ -1.38
PHGDH-219ENST00000641513 MORN3Q6PF18 240 aaPredicted RBP6.46□□□□□ -1.38
PHGDH-219ENST00000641513 C9orf85Q96MD7 179 aa6.46□□□□□ -1.38
PHGDH-219ENST00000641513 C1QTNF4Q9BXJ3 329 aa6.46□□□□□ -1.38
PHGDH-219ENST00000641513 JMJD1CQ15652 2540 aa6.46□□□□□ -1.38
PHGDH-219ENST00000641513 NIPBLQ6KC79 2804 aaeCLIP6.45□□□□□ -1.38
PHGDH-219ENST00000641513 NACAE9PAV3 2078 aa6.45□□□□□ -1.38
PHGDH-219ENST00000641513 F5H697 171 aa6.45□□□□□ -1.38
PHGDH-219ENST00000641513 H0Y8G0 127 aa6.45□□□□□ -1.38
PHGDH-219ENST00000641513 H3BRM9 83 aa6.45□□□□□ -1.38
PHGDH-219ENST00000641513 PTTG1IPP53801 180 aa6.45□□□□□ -1.38
PHGDH-219ENST00000641513 TAL2Q16559 108 aa6.45□□□□□ -1.38
PHGDH-219ENST00000641513 ZNF876PQ49A33 203 aa6.45□□□□□ -1.38
PHGDH-219ENST00000641513 FAM74A4Q5TZK3 123 aa6.45□□□□□ -1.38
PHGDH-219ENST00000641513 WFDC9Q8NEX5 89 aa6.45□□□□□ -1.38
PHGDH-219ENST00000641513 TOMM6Q96B49 74 aa6.45□□□□□ -1.38
PHGDH-219ENST00000641513 HHLA3Q9XRX5 114 aa6.45□□□□□ -1.38
PHGDH-219ENST00000641513 A0A087WWL8 130 aa6.44□□□□□ -1.38
PHGDH-219ENST00000641513 TRAV26-2A0A0B4J265 109 aa6.44□□□□□ -1.38
PHGDH-219ENST00000641513 TRBV6-5A0A0K0K1A5 114 aa6.44□□□□□ -1.38
PHGDH-219ENST00000641513 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.44□□□□□ -1.38
PHGDH-219ENST00000641513 PRSS1P07477 247 aa6.44□□□□□ -1.38
PHGDH-219ENST00000641513 GATA1P15976 413 aaPredicted RBP6.44□□□□□ -1.38
PHGDH-219ENST00000641513 C1orf158Q8N1D5 194 aa6.44□□□□□ -1.38
PHGDH-219ENST00000641513 RASL10AQ92737 203 aa6.44□□□□□ -1.38
PHGDH-219ENST00000641513 JPT2Q9H910 190 aa6.44□□□□□ -1.38
PHGDH-219ENST00000641513 KIF25-AS1Q9Y6Z4 181 aa6.44□□□□□ -1.38
PHGDH-219ENST00000641513 ATRQ13535 2644 aa6.44□□□□□ -1.38
PHGDH-219ENST00000641513 F8VRH5 84 aa6.43□□□□□ -1.38
PHGDH-219ENST00000641513 H7C1H1 209 aa6.43□□□□□ -1.38
PHGDH-219ENST00000641513 M0R2P5 195 aa6.43□□□□□ -1.38
PHGDH-219ENST00000641513 CCL25O15444 150 aa6.43□□□□□ -1.38
PHGDH-219ENST00000641513 GAS8-AS1O95177 125 aa6.43□□□□□ -1.38
PHGDH-219ENST00000641513 AZU1P20160 251 aa6.43□□□□□ -1.38
PHGDH-219ENST00000641513 ZNF56Q15929 161 aa6.43□□□□□ -1.38
PHGDH-219ENST00000641513 PAPPA-AS1Q5QFB9 102 aa6.43□□□□□ -1.38
PHGDH-219ENST00000641513 PIK3CD-AS1Q5SR53 167 aa6.43□□□□□ -1.38
PHGDH-219ENST00000641513 LINC00467Q9BRT7 94 aa6.43□□□□□ -1.38
PHGDH-219ENST00000641513 SPXQ9BT56 116 aa6.43□□□□□ -1.38
PHGDH-219ENST00000641513 CSTL1Q9H114 145 aa6.43□□□□□ -1.38
PHGDH-219ENST00000641513 EDA2RQ9HAV5 297 aa6.43□□□□□ -1.38
PHGDH-219ENST00000641513 DKK2Q9UBU2 259 aa6.43□□□□□ -1.38
PHGDH-219ENST00000641513 C9orf118A6NHY6 69 aa6.42□□□□□ -1.38
PHGDH-219ENST00000641513 GIG44P09565 113 aaPredicted RBP6.42□□□□□ -1.38
PHGDH-219ENST00000641513 OXLD1Q5BKU9 147 aa6.42□□□□□ -1.38
PHGDH-219ENST00000641513 ERASQ7Z444 233 aa6.42□□□□□ -1.38
PHGDH-219ENST00000641513 PTH2Q96A98 100 aa6.42□□□□□ -1.38
PHGDH-219ENST00000641513 MRPL16Q9NX20 251 aaKnown RBP6.42□□□□□ -1.38
PHGDH-219ENST00000641513 TENM1Q9UKZ4 2725 aa6.42□□□□□ -1.38
PHGDH-219ENST00000641513 IGHV3-73A0A0B4J1V6 119 aa6.41□□□□□ -1.38
PHGDH-219ENST00000641513 APOC4P55056 127 aa6.41□□□□□ -1.38
PHGDH-219ENST00000641513 LINC00315P59091 139 aa6.41□□□□□ -1.38
PHGDH-219ENST00000641513 VAMP3Q15836 100 aa6.41□□□□□ -1.38
PHGDH-219ENST00000641513 RRN3P1Q2M238 152 aa6.41□□□□□ -1.38
PHGDH-219ENST00000641513 ZC2HC1BQ5TFG8 222 aa6.41□□□□□ -1.38
PHGDH-219ENST00000641513 SUMO4Q6EEV6 95 aa6.41□□□□□ -1.38
PHGDH-219ENST00000641513 GTF2H5Q6ZYL4 71 aa6.41□□□□□ -1.38
PHGDH-219ENST00000641513 C11orf72Q8NBR9 251 aa6.41□□□□□ -1.38
PHGDH-219ENST00000641513 NEXN-AS1Q8NBZ9 246 aa6.41□□□□□ -1.38
PHGDH-219ENST00000641513 TMEM263Q8WUH6 116 aaKnown RBP6.41□□□□□ -1.38
PHGDH-219ENST00000641513 RPL39LQ96EH5 51 aaKnown RBP6.41□□□□□ -1.38
PHGDH-219ENST00000641513 C16orf74Q96GX8 76 aa6.41□□□□□ -1.38
PHGDH-219ENST00000641513 TMEM141Q96I45 108 aa6.41□□□□□ -1.38
PHGDH-219ENST00000641513 C18orf15Q96N68 181 aa6.41□□□□□ -1.38
PHGDH-219ENST00000641513 TM2D2Q9BX73 214 aa6.41□□□□□ -1.38
PHGDH-219ENST00000641513 TRGV1A0A0A0MS02 117 aa6.4□□□□□ -1.38
PHGDH-219ENST00000641513 TRBV27A0A0K0K1C4 114 aa6.4□□□□□ -1.38
PHGDH-219ENST00000641513 A8MWV9 139 aa6.4□□□□□ -1.38
PHGDH-219ENST00000641513 VCYO14598 125 aa6.4□□□□□ -1.38
PHGDH-219ENST00000641513 NMUP48645 174 aa6.4□□□□□ -1.38
PHGDH-219ENST00000641513 POLR2KP53803 58 aaKnown RBP6.4□□□□□ -1.38
PHGDH-219ENST00000641513 RHOHQ15669 191 aa6.4□□□□□ -1.38
PHGDH-219ENST00000641513 OR4C5Q8NGB2 326 aa6.4□□□□□ -1.38
PHGDH-219ENST00000641513 OR5A1Q8NGJ0 315 aa6.4□□□□□ -1.38
PHGDH-219ENST00000641513 SCGB3A1Q96QR1 104 aa6.4□□□□□ -1.38
PHGDH-219ENST00000641513 TIMM17AQ99595 171 aa6.4□□□□□ -1.38
PHGDH-219ENST00000641513 CHAC1Q9BUX1 264 aa6.4□□□□□ -1.38
PHGDH-219ENST00000641513 MRPL35Q9NZE8 188 aaKnown RBP6.4□□□□□ -1.38
PHGDH-219ENST00000641513 TP73-AS1Q9UF72 201 aa6.4□□□□□ -1.38
PHGDH-219ENST00000641513 CYSLTR1Q9Y271 337 aa6.4□□□□□ -1.38
PHGDH-219ENST00000641513 CBY1Q9Y3M2 126 aa6.4□□□□□ -1.38
PHGDH-219ENST00000641513 WIPF1O43516 503 aa6.39□□□□□ -1.39
PHGDH-219ENST00000641513 CRYGDP07320 174 aa6.39□□□□□ -1.39
PHGDH-219ENST00000641513 EMP1P54849 157 aa6.39□□□□□ -1.39
PHGDH-219ENST00000641513 UFSP1Q6NVU6 142 aa6.39□□□□□ -1.39
PHGDH-219ENST00000641513 C2orf66Q6UXQ4 117 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms