RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 CKS2P33552 79 aa7.44□□□□□ -1.22
CLN5-213ENST00000636681 GAGE1Q13065 139 aa7.44□□□□□ -1.22
CLN5-213ENST00000636681 GAGE4Q13068 117 aa7.44□□□□□ -1.22
CLN5-213ENST00000636681 GAGE5Q13069 117 aa7.44□□□□□ -1.22
CLN5-213ENST00000636681 IQCJQ1A5X6 159 aa7.44□□□□□ -1.22
CLN5-213ENST00000636681 GAGE13Q4V321 117 aa7.44□□□□□ -1.22
CLN5-213ENST00000636681 PHLDA1Q8WV24 401 aaPredicted RBP7.44□□□□□ -1.22
CLN5-213ENST00000636681 IGHV3-38A0A0C4DH36 116 aa7.43□□□□□ -1.22
CLN5-213ENST00000636681 TEX48A0A1B0GUV7 120 aa7.43□□□□□ -1.22
CLN5-213ENST00000636681 GYPEP15421 78 aa7.43□□□□□ -1.22
CLN5-213ENST00000636681 SRIP30626 198 aa7.43□□□□□ -1.22
CLN5-213ENST00000636681 ZFAND6Q6FIF0 208 aa7.43□□□□□ -1.22
CLN5-213ENST00000636681 PRELID3AQ96N28 172 aa7.43□□□□□ -1.22
CLN5-213ENST00000636681 ALKBH7Q9BT30 221 aaPredicted RBP7.43□□□□□ -1.22
CLN5-213ENST00000636681 LOC389332A0A1B0GUA5 103 aa7.43□□□□□ -1.22
CLN5-213ENST00000636681 PAX4O43316 350 aa7.43□□□□□ -1.22
CLN5-213ENST00000636681 TNFRSF6BO95407 300 aa7.43□□□□□ -1.22
CLN5-213ENST00000636681 ZNRF2Q8NHG8 242 aa7.43□□□□□ -1.22
CLN5-213ENST00000636681 PRO0255Q9UI72 69 aa7.43□□□□□ -1.22
CLN5-213ENST00000636681 MT-ND6P03923 174 aa7.42□□□□□ -1.22
CLN5-213ENST00000636681 OR10J3Q5JRS4 329 aa7.42□□□□□ -1.22
CLN5-213ENST00000636681 ORMDL3Q8N138 153 aa7.42□□□□□ -1.22
CLN5-213ENST00000636681 MRAP2Q96G30 205 aa7.42□□□□□ -1.22
CLN5-213ENST00000636681 TRAV10A0A0B4J240 114 aa7.41□□□□□ -1.22
CLN5-213ENST00000636681 TRBV6-4A0A1B0GX49 114 aa7.41□□□□□ -1.22
CLN5-213ENST00000636681 COX19Q49B96 90 aa7.41□□□□□ -1.22
CLN5-213ENST00000636681 IGLL5B9A064 214 aa7.41□□□□□ -1.22
CLN5-213ENST00000636681 NIT2Q9NQR4 276 aa7.41□□□□□ -1.22
CLN5-213ENST00000636681 NUDT3O95989 172 aa7.4□□□□□ -1.23
CLN5-213ENST00000636681 RHOHQ15669 191 aa7.4□□□□□ -1.23
CLN5-213ENST00000636681 C18orf32Q8TCD1 76 aa7.4□□□□□ -1.23
CLN5-213ENST00000636681 URB1-AS1Q96HZ7 61 aa7.4□□□□□ -1.23
CLN5-213ENST00000636681 DNAH1Q9P2D7 4330 aa7.4□□□□□ -1.23
CLN5-213ENST00000636681 SDHAF1A6NFY7 115 aa7.39□□□□□ -1.23
CLN5-213ENST00000636681 HIST1H2BKO60814 126 aa7.39□□□□□ -1.23
CLN5-213ENST00000636681 HIST1H2BJP06899 126 aa7.39□□□□□ -1.23
CLN5-213ENST00000636681 LINC00694P0DN24 101 aa7.39□□□□□ -1.23
CLN5-213ENST00000636681 HIST1H2BOP23527 126 aa7.39□□□□□ -1.23
CLN5-213ENST00000636681 HIST1H2BBP33778 126 aa7.39□□□□□ -1.23
CLN5-213ENST00000636681 IFI27P40305 119 aaPredicted RBP7.39□□□□□ -1.23
CLN5-213ENST00000636681 HIST1H2BDP58876 126 aa7.39□□□□□ -1.23
CLN5-213ENST00000636681 UBE2D3P61077 147 aa7.39□□□□□ -1.23
CLN5-213ENST00000636681 HIST1H2BCP62807 126 aa7.39□□□□□ -1.23
CLN5-213ENST00000636681 UBE2D2P62837 147 aa7.39□□□□□ -1.23
CLN5-213ENST00000636681 HIST2H2BEQ16778 126 aa7.39□□□□□ -1.23
CLN5-213ENST00000636681 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.39□□□□□ -1.23
CLN5-213ENST00000636681 HIST1H2BHQ93079 126 aa7.39□□□□□ -1.23
CLN5-213ENST00000636681 HIST1H2BNQ99877 126 aa7.39□□□□□ -1.23
CLN5-213ENST00000636681 HIST1H2BMQ99879 126 aa7.39□□□□□ -1.23
CLN5-213ENST00000636681 TMEM70Q9BUB7 260 aa7.39□□□□□ -1.23
CLN5-213ENST00000636681 TRBV7-3A0A075B6L6 115 aa7.38□□□□□ -1.23
CLN5-213ENST00000636681 TCAPO15273 167 aa7.38□□□□□ -1.23
CLN5-213ENST00000636681 POLR2KP53803 58 aaKnown RBP7.38□□□□□ -1.23
CLN5-213ENST00000636681 LINC00310P59036 64 aa7.38□□□□□ -1.23
CLN5-213ENST00000636681 SUMO2P61956 95 aaKnown RBP7.38□□□□□ -1.23
CLN5-213ENST00000636681 PRADC1Q9BSG0 188 aa7.38□□□□□ -1.23
CLN5-213ENST00000636681 ST20Q9HBF5 79 aa7.38□□□□□ -1.23
CLN5-213ENST00000636681 TNFRSF18Q9Y5U5 241 aa7.38□□□□□ -1.23
CLN5-213ENST00000636681 VPS13DQ5THJ4 4388 aa7.38□□□□□ -1.23
CLN5-213ENST00000636681 IGLV2-18A0A075B6J9 118 aa7.38□□□□□ -1.23
CLN5-213ENST00000636681 NUPR1O60356 82 aa7.38□□□□□ -1.23
CLN5-213ENST00000636681 CIDEAO60543 219 aa7.38□□□□□ -1.23
CLN5-213ENST00000636681 PPBPP02775 128 aa7.38□□□□□ -1.23
CLN5-213ENST00000636681 NTM-AS1Q6ZSK4 140 aa7.38□□□□□ -1.23
CLN5-213ENST00000636681 TRBV6-5A0A0K0K1A5 114 aa7.37□□□□□ -1.23
CLN5-213ENST00000636681 H7C1H1 209 aa7.37□□□□□ -1.23
CLN5-213ENST00000636681 RPL36AP83881 106 aaKnown RBP7.37□□□□□ -1.23
CLN5-213ENST00000636681 CEMP1Q6PRD7 247 aaPredicted RBP7.37□□□□□ -1.23
CLN5-213ENST00000636681 RPL36ALQ969Q0 106 aaKnown RBP7.37□□□□□ -1.23
CLN5-213ENST00000636681 TRBV10-1A0A0K0K1A3 114 aa7.36□□□□□ -1.23
CLN5-213ENST00000636681 TSHBP01222 138 aa7.36□□□□□ -1.23
CLN5-213ENST00000636681 C4orf48Q5BLP8 95 aa7.36□□□□□ -1.23
CLN5-213ENST00000636681 SMIM2Q9BVW6 85 aa7.36□□□□□ -1.23
CLN5-213ENST00000636681 C1orf196B1AJZ1 125 aa7.36□□□□□ -1.23
CLN5-213ENST00000636681 PMCHL1Q16048 86 aa7.36□□□□□ -1.23
CLN5-213ENST00000636681 ATP6V0E2Q8NHE4 81 aa7.36□□□□□ -1.23
CLN5-213ENST00000636681 MUC7Q8TAX7 377 aa7.36□□□□□ -1.23
CLN5-213ENST00000636681 WWC2-AS2Q96NR7 200 aa7.36□□□□□ -1.23
CLN5-213ENST00000636681 MAP1LC3AQ9H492 121 aa7.36□□□□□ -1.23
CLN5-213ENST00000636681 APLNQ9ULZ1 77 aa7.36□□□□□ -1.23
CLN5-213ENST00000636681 ICOSQ9Y6W8 199 aa7.36□□□□□ -1.23
CLN5-213ENST00000636681 PMCHP20382 165 aa7.35□□□□□ -1.23
CLN5-213ENST00000636681 ESRGQ1W209 222 aa7.35□□□□□ -1.23
CLN5-213ENST00000636681 NIT1Q86X76 327 aa7.35□□□□□ -1.23
CLN5-213ENST00000636681 Q8N3U1 123 aa7.35□□□□□ -1.23
CLN5-213ENST00000636681 DNAJC30Q96LL9 226 aa7.35□□□□□ -1.23
CLN5-213ENST00000636681 C20orf78Q9BR46 151 aa7.35□□□□□ -1.23
CLN5-213ENST00000636681 TRBV27A0A0K0K1C4 114 aa7.34□□□□□ -1.23
CLN5-213ENST00000636681 NDUFA6P56556 154 aa7.34□□□□□ -1.23
CLN5-213ENST00000636681 MRPL23Q16540 153 aaKnown RBP7.34□□□□□ -1.23
CLN5-213ENST00000636681 RNASEKQ6P5S7 137 aaKnown RBP7.34□□□□□ -1.23
CLN5-213ENST00000636681 PRSS3P2Q8NHM4 247 aa7.34□□□□□ -1.23
CLN5-213ENST00000636681 PRSS47A8MTI9 375 aa7.33□□□□□ -1.24
CLN5-213ENST00000636681 SERF1AO75920 110 aa7.33□□□□□ -1.24
CLN5-213ENST00000636681 LYPD5Q6UWN5 251 aa7.33□□□□□ -1.24
CLN5-213ENST00000636681 Q8N8P6 123 aa7.33□□□□□ -1.24
CLN5-213ENST00000636681 LAMTOR2Q9Y2Q5 125 aa7.33□□□□□ -1.24
CLN5-213ENST00000636681 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.33□□□□□ -1.24
CLN5-213ENST00000636681 IGKV2-29A2NJV5 120 aaPredicted RBP7.33□□□□□ -1.24
CLN5-213ENST00000636681 I3L3M4 83 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms