RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 FABP2P12104 132 aa12.91□□□□□ -0.34
FAM3A-222ENST00000621967 SUMO4Q6EEV6 95 aa12.91□□□□□ -0.34
FAM3A-222ENST00000621967 JPT2Q9H910 190 aa12.91□□□□□ -0.34
FAM3A-222ENST00000621967 SPCS1Q9Y6A9 102 aa12.91□□□□□ -0.34
FAM3A-222ENST00000621967 TENM1Q9UKZ4 2725 aa12.9□□□□□ -0.34
FAM3A-222ENST00000621967 PRSS29PA6NIE9 313 aa12.9□□□□□ -0.34
FAM3A-222ENST00000621967 OR11H12B2RN74 326 aa12.9□□□□□ -0.34
FAM3A-222ENST00000621967 ZNF688P0C7X2 276 aa12.9□□□□□ -0.34
FAM3A-222ENST00000621967 OR11H1Q8NG94 326 aa12.9□□□□□ -0.34
FAM3A-222ENST00000621967 OR11H2Q8NH07 326 aa12.9□□□□□ -0.34
FAM3A-222ENST00000621967 C4orf3Q8WVX3 66 aa12.9□□□□□ -0.34
FAM3A-222ENST00000621967 COL6A5A8TX70 2615 aa12.9□□□□□ -0.34
FAM3A-222ENST00000621967 TRBV7-3A0A075B6L6 115 aa12.9□□□□□ -0.35
FAM3A-222ENST00000621967 IGHV3-16A0A0C4DH30 117 aa12.9□□□□□ -0.35
FAM3A-222ENST00000621967 E9PLD3 99 aa12.9□□□□□ -0.35
FAM3A-222ENST00000621967 LGALS9O00182 355 aa12.9□□□□□ -0.35
FAM3A-222ENST00000621967 C18orf65Q6ZTR6 163 aa12.9□□□□□ -0.35
FAM3A-222ENST00000621967 C3orf56Q8N813 242 aa12.9□□□□□ -0.35
FAM3A-222ENST00000621967 CYSLTR1Q9Y271 337 aa12.9□□□□□ -0.35
FAM3A-222ENST00000621967 MYMXA0A1B0GTQ4 84 aa12.89□□□□□ -0.35
FAM3A-222ENST00000621967 K7ERJ3 54 aa12.89□□□□□ -0.35
FAM3A-222ENST00000621967 K7ERU9 68 aa12.89□□□□□ -0.35
FAM3A-222ENST00000621967 DUSP14O95147 198 aaKnown RBP12.89□□□□□ -0.35
FAM3A-222ENST00000621967 PCP4P48539 62 aa12.89□□□□□ -0.35
FAM3A-222ENST00000621967 SNRPD3P62318 126 aaKnown RBP12.89□□□□□ -0.35
FAM3A-222ENST00000621967 RNF151Q2KHN1 245 aa12.89□□□□□ -0.35
FAM3A-222ENST00000621967 NSUN5P1Q3KNT7 163 aa12.89□□□□□ -0.35
FAM3A-222ENST00000621967 NHP2Q9NX24 153 aaKnown RBP12.89□□□□□ -0.35
FAM3A-222ENST00000621967 TRBV6-5A0A0K0K1A5 114 aa12.88□□□□□ -0.35
FAM3A-222ENST00000621967 ZFP2Q6ZN57 461 aa12.88□□□□□ -0.35
FAM3A-222ENST00000621967 NEGR1Q7Z3B1 354 aa12.88□□□□□ -0.35
FAM3A-222ENST00000621967 NDUFA11Q86Y39 141 aa12.88□□□□□ -0.35
FAM3A-222ENST00000621967 CITED1Q99966 193 aa12.88□□□□□ -0.35
FAM3A-222ENST00000621967 IGIPA6NJ69 53 aa12.88□□□□□ -0.35
FAM3A-222ENST00000621967 TSHBP01222 138 aa12.88□□□□□ -0.35
FAM3A-222ENST00000621967 CRYGDP07320 174 aa12.88□□□□□ -0.35
FAM3A-222ENST00000621967 DEFB136Q30KP8 78 aa12.88□□□□□ -0.35
FAM3A-222ENST00000621967 A0A087WWL8 130 aa12.87□□□□□ -0.35
FAM3A-222ENST00000621967 VCYO14598 125 aa12.87□□□□□ -0.35
FAM3A-222ENST00000621967 TRBV27A0A0K0K1C4 114 aa12.86□□□□□ -0.35
FAM3A-222ENST00000621967 TP53TG1Q9Y2A0 90 aa12.86□□□□□ -0.35
FAM3A-222ENST00000621967 HIST1H4GQ99525 98 aa12.86□□□□□ -0.35
FAM3A-222ENST00000621967 PRADC1Q9BSG0 188 aa12.86□□□□□ -0.35
FAM3A-222ENST00000621967 IGLV4-69A0A075B6H9 119 aa12.85□□□□□ -0.35
FAM3A-222ENST00000621967 A0A1B0GWB2 263 aa12.85□□□□□ -0.35
FAM3A-222ENST00000621967 SDHAF1A6NFY7 115 aa12.85□□□□□ -0.35
FAM3A-222ENST00000621967 SYNJ2BPP57105 145 aa12.85□□□□□ -0.35
FAM3A-222ENST00000621967 C12orf74Q32Q52 190 aa12.85□□□□□ -0.35
FAM3A-222ENST00000621967 TMEM141Q96I45 108 aa12.85□□□□□ -0.35
FAM3A-222ENST00000621967 TIMM17AQ99595 171 aa12.85□□□□□ -0.35
FAM3A-222ENST00000621967 KIR2DL4Q99706 377 aa12.85□□□□□ -0.35
FAM3A-222ENST00000621967 MDFICQ9P1T7 246 aa12.85□□□□□ -0.35
FAM3A-222ENST00000621967 SORL1Q92673 2214 aa12.85□□□□□ -0.35
FAM3A-222ENST00000621967 TRAV12-2A0A075B6T6 113 aa12.84□□□□□ -0.35
FAM3A-222ENST00000621967 IGHV1OR15-1A0A075B7D0 117 aa12.84□□□□□ -0.35
FAM3A-222ENST00000621967 ADARB2-AS1A8MUL3 147 aa12.84□□□□□ -0.35
FAM3A-222ENST00000621967 IGLL5B9A064 214 aa12.84□□□□□ -0.35
FAM3A-222ENST00000621967 Q8N1Y9 231 aa12.84□□□□□ -0.35
FAM3A-222ENST00000621967 SYT8Q8NBV8 401 aa12.84□□□□□ -0.35
FAM3A-222ENST00000621967 STAB1Q9NY15 2570 aa12.84□□□□□ -0.35
FAM3A-222ENST00000621967 F5H697 171 aa12.84□□□□□ -0.35
FAM3A-222ENST00000621967 PAPPA-AS1Q5QFB9 102 aa12.84□□□□□ -0.35
FAM3A-222ENST00000621967 SHISA2Q6UWI4 295 aa12.84□□□□□ -0.35
FAM3A-222ENST00000621967 DUX3Q96PT4 197 aa12.84□□□□□ -0.35
FAM3A-222ENST00000621967 SAP30O75446 220 aa12.83□□□□□ -0.36
FAM3A-222ENST00000621967 PMVKQ15126 192 aa12.83□□□□□ -0.36
FAM3A-222ENST00000621967 MORN3Q6PF18 240 aaPredicted RBP12.83□□□□□ -0.36
FAM3A-222ENST00000621967 AMTNQ6UX39 209 aa12.83□□□□□ -0.36
FAM3A-222ENST00000621967 RAX2Q96IS3 184 aa12.83□□□□□ -0.36
FAM3A-222ENST00000621967 MDFIQ99750 246 aa12.83□□□□□ -0.36
FAM3A-222ENST00000621967 VPS25Q9BRG1 176 aa12.83□□□□□ -0.36
FAM3A-222ENST00000621967 C11orf86A6NJI1 115 aa12.82□□□□□ -0.36
FAM3A-222ENST00000621967 M0QY20 66 aa12.82□□□□□ -0.36
FAM3A-222ENST00000621967 CCL24O00175 119 aa12.82□□□□□ -0.36
FAM3A-222ENST00000621967 IGKV3-20P01619 116 aa12.82□□□□□ -0.36
FAM3A-222ENST00000621967 HOXD3P31249 432 aaPredicted RBP12.82□□□□□ -0.36
FAM3A-222ENST00000621967 RPL39P62891 51 aaKnown RBP12.82□□□□□ -0.36
FAM3A-222ENST00000621967 SPINK13Q1W4C9 94 aa12.82□□□□□ -0.36
FAM3A-222ENST00000621967 FOXI2Q6ZQN5 318 aa12.82□□□□□ -0.36
FAM3A-222ENST00000621967 FAM74A4Q5TZK3 123 aa12.81□□□□□ -0.36
FAM3A-222ENST00000621967 ZNF815PA8K554 130 aa12.8□□□□□ -0.36
FAM3A-222ENST00000621967 PF4P02776 101 aa12.8□□□□□ -0.36
FAM3A-222ENST00000621967 SLURP1P55000 103 aa12.8□□□□□ -0.36
FAM3A-222ENST00000621967 FHL3Q13643 280 aa12.8□□□□□ -0.36
FAM3A-222ENST00000621967 C21orf62-AS1Q17RA5 79 aa12.8□□□□□ -0.36
FAM3A-222ENST00000621967 ZNF479Q96JC4 524 aa12.8□□□□□ -0.36
FAM3A-222ENST00000621967 ZNF256Q9Y2P7 627 aaPredicted RBP12.8□□□□□ -0.36
FAM3A-222ENST00000621967 RHOHQ15669 191 aa12.8□□□□□ -0.36
FAM3A-222ENST00000621967 ZNF56Q15929 161 aa12.8□□□□□ -0.36
FAM3A-222ENST00000621967 NACAE9PAV3 2078 aa12.79□□□□□ -0.36
FAM3A-222ENST00000621967 G3V4G9 280 aa12.79□□□□□ -0.36
FAM3A-222ENST00000621967 TRPT1Q86TN4 253 aaKnown RBP12.79□□□□□ -0.36
FAM3A-222ENST00000621967 RRN3P1Q2M238 152 aa12.78□□□□□ -0.36
FAM3A-222ENST00000621967 ZNF876PQ49A33 203 aa12.78□□□□□ -0.36
FAM3A-222ENST00000621967 TRGV11A0A075B6L2 103 aa12.78□□□□□ -0.36
FAM3A-222ENST00000621967 A8MTW9 85 aa12.78□□□□□ -0.36
FAM3A-222ENST00000621967 HERVK_113P61574 105 aa12.78□□□□□ -0.36
FAM3A-222ENST00000621967 CD300EQ496F6 205 aaPredicted RBP12.78□□□□□ -0.36
FAM3A-222ENST00000621967 PLEKHB2Q96CS7 222 aa12.78□□□□□ -0.36
FAM3A-222ENST00000621967 WNK1Q9H4A3 2382 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms