RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 HINT1P49773 126 aaPredicted RBP7.64□□□□□ -1.19
VPS11-208ENST00000621676 COX19Q49B96 90 aa7.64□□□□□ -1.19
VPS11-208ENST00000621676 NDUFA11Q86Y39 141 aa7.63□□□□□ -1.19
VPS11-208ENST00000621676 IFI27L1Q96BM0 104 aa7.63□□□□□ -1.19
VPS11-208ENST00000621676 SCGB3A1Q96QR1 104 aa7.63□□□□□ -1.19
VPS11-208ENST00000621676 C16orf95Q9H693 158 aa7.63□□□□□ -1.19
VPS11-208ENST00000621676 TRBV6-1A0A0K0K1D8 114 aa7.63□□□□□ -1.19
VPS11-208ENST00000621676 A0A0U1RRA0 63 aa7.63□□□□□ -1.19
VPS11-208ENST00000621676 CRYGDP07320 174 aa7.63□□□□□ -1.19
VPS11-208ENST00000621676 NAA38Q9BRA0 125 aaKnown RBP7.63□□□□□ -1.19
VPS11-208ENST00000621676 ZNF25P17030 456 aaPredicted RBP7.63□□□□□ -1.19
VPS11-208ENST00000621676 SYT8Q8NBV8 401 aa7.63□□□□□ -1.19
VPS11-208ENST00000621676 MDFIQ99750 246 aa7.63□□□□□ -1.19
VPS11-208ENST00000621676 ST20Q9HBF5 79 aa7.63□□□□□ -1.19
VPS11-208ENST00000621676 TP53TG1Q9Y2A0 90 aa7.63□□□□□ -1.19
VPS11-208ENST00000621676 TNFRSF18Q9Y5U5 241 aa7.63□□□□□ -1.19
VPS11-208ENST00000621676 TRGV4A0A0C4DH28 118 aa7.62□□□□□ -1.19
VPS11-208ENST00000621676 M0R143 59 aa7.62□□□□□ -1.19
VPS11-208ENST00000621676 HBDP02042 147 aa7.62□□□□□ -1.19
VPS11-208ENST00000621676 GIG44P09565 113 aaPredicted RBP7.62□□□□□ -1.19
VPS11-208ENST00000621676 NRACQ8N912 160 aa7.62□□□□□ -1.19
VPS11-208ENST00000621676 ZNF747Q9BV97 191 aa7.62□□□□□ -1.19
VPS11-208ENST00000621676 ANK2Q01484 3957 aa7.62□□□□□ -1.19
VPS11-208ENST00000621676 RASL11AQ6T310 242 aa7.62□□□□□ -1.19
VPS11-208ENST00000621676 C2orf66Q6UXQ4 117 aa7.62□□□□□ -1.19
VPS11-208ENST00000621676 C21orf62-AS1Q17RA5 79 aa7.61□□□□□ -1.19
VPS11-208ENST00000621676 POM121L12Q8N7R1 296 aa7.61□□□□□ -1.19
VPS11-208ENST00000621676 OR11H2Q8NH07 326 aa7.61□□□□□ -1.19
VPS11-208ENST00000621676 FAM19A4Q96LR4 140 aa7.61□□□□□ -1.19
VPS11-208ENST00000621676 SMIM2Q9BVW6 85 aa7.61□□□□□ -1.19
VPS11-208ENST00000621676 MRPL35Q9NZE8 188 aaKnown RBP7.61□□□□□ -1.19
VPS11-208ENST00000621676 LENEPQ9Y5L5 61 aa7.61□□□□□ -1.19
VPS11-208ENST00000621676 LAGE3Q14657 143 aa7.6□□□□□ -1.19
VPS11-208ENST00000621676 ZNF493Q6ZR52 646 aa7.6□□□□□ -1.19
VPS11-208ENST00000621676 TRPT1Q86TN4 253 aaKnown RBP7.6□□□□□ -1.19
VPS11-208ENST00000621676 KIR2DL4Q99706 377 aa7.6□□□□□ -1.19
VPS11-208ENST00000621676 GOLT1BQ9Y3E0 138 aa7.6□□□□□ -1.19
VPS11-208ENST00000621676 IGHV4-30-4P0DP06 118 aa7.6□□□□□ -1.19
VPS11-208ENST00000621676 ZNF415Q09FC8 603 aa7.6□□□□□ -1.19
VPS11-208ENST00000621676 TRGV11A0A075B6L2 103 aa7.6□□□□□ -1.19
VPS11-208ENST00000621676 HSBP1L1C9JCN9 74 aa7.6□□□□□ -1.19
VPS11-208ENST00000621676 SFTA2Q6UW10 78 aa7.6□□□□□ -1.19
VPS11-208ENST00000621676 PCP2Q8IVA1 136 aa7.6□□□□□ -1.19
VPS11-208ENST00000621676 TMEM262E9PQX1 116 aa7.59□□□□□ -1.19
VPS11-208ENST00000621676 ANKRD39Q53RE8 183 aa7.59□□□□□ -1.19
VPS11-208ENST00000621676 TMEM170BQ5T4T1 132 aa7.59□□□□□ -1.19
VPS11-208ENST00000621676 Q8N976 141 aa7.59□□□□□ -1.19
VPS11-208ENST00000621676 HSPB8Q9UJY1 196 aa7.59□□□□□ -1.19
VPS11-208ENST00000621676 A8MZ25 164 aa7.59□□□□□ -1.19
VPS11-208ENST00000621676 C19orf73Q9NVV2 129 aa7.59□□□□□ -1.19
VPS11-208ENST00000621676 M0R2P5 195 aa7.58□□□□□ -1.2
VPS11-208ENST00000621676 LINC00315P59091 139 aa7.58□□□□□ -1.2
VPS11-208ENST00000621676 CFAP126Q5VTH2 177 aa7.58□□□□□ -1.2
VPS11-208ENST00000621676 DGAT2L7PQ6IED9 249 aa7.58□□□□□ -1.2
VPS11-208ENST00000621676 TRAV13-1A0A0B4J241 112 aa7.58□□□□□ -1.2
VPS11-208ENST00000621676 KIR2DL5BA0A0G2JN68 375 aa7.58□□□□□ -1.2
VPS11-208ENST00000621676 KIR2DL5BA0A0G2JPC4 375 aa7.58□□□□□ -1.2
VPS11-208ENST00000621676 NPSP0C0P6 89 aa7.58□□□□□ -1.2
VPS11-208ENST00000621676 FAM222AQ5U5X8 452 aa7.58□□□□□ -1.2
VPS11-208ENST00000621676 MORN3Q6PF18 240 aaPredicted RBP7.58□□□□□ -1.2
VPS11-208ENST00000621676 KIR2DL5AQ8N109 375 aa7.58□□□□□ -1.2
VPS11-208ENST00000621676 TMEM238LA0A1B0GVL6 79 aa7.58□□□□□ -1.2
VPS11-208ENST00000621676 KRTAP10-11P60412 298 aa7.58□□□□□ -1.2
VPS11-208ENST00000621676 ZNF625Q96I27 306 aaPredicted RBP7.58□□□□□ -1.2
VPS11-208ENST00000621676 F5H768 121 aa7.57□□□□□ -1.2
VPS11-208ENST00000621676 K7EP13 123 aa7.57□□□□□ -1.2
VPS11-208ENST00000621676 M0QY20 66 aa7.57□□□□□ -1.2
VPS11-208ENST00000621676 NPC2P61916 151 aa7.57□□□□□ -1.2
VPS11-208ENST00000621676 SLC25A29Q8N8R3 303 aa7.57□□□□□ -1.2
VPS11-208ENST00000621676 CITED1Q99966 193 aa7.57□□□□□ -1.2
VPS11-208ENST00000621676 A0A1B0GW15 77 aa7.57□□□□□ -1.2
VPS11-208ENST00000621676 DLEU1O43261 78 aa7.57□□□□□ -1.2
VPS11-208ENST00000621676 HNRNPA3P51991 378 aaKnown RBP7.57□□□□□ -1.2
VPS11-208ENST00000621676 C9orf66Q5T8R8 295 aa7.57□□□□□ -1.2
VPS11-208ENST00000621676 Q8N3U1 123 aa7.57□□□□□ -1.2
VPS11-208ENST00000621676 CHCHD1Q96BP2 118 aaKnown RBP7.57□□□□□ -1.2
VPS11-208ENST00000621676 C11orf68Q9H3H3 251 aaKnown RBP7.57□□□□□ -1.2
VPS11-208ENST00000621676 C20orf202A1L168 122 aa7.57□□□□□ -1.2
VPS11-208ENST00000621676 COX8CQ7Z4L0 72 aa7.57□□□□□ -1.2
VPS11-208ENST00000621676 IGKV2D-26A0A0A0MRZ7 120 aa7.56□□□□□ -1.2
VPS11-208ENST00000621676 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.56□□□□□ -1.2
VPS11-208ENST00000621676 PPBPP02775 128 aa7.56□□□□□ -1.2
VPS11-208ENST00000621676 Q8N8P6 123 aa7.56□□□□□ -1.2
VPS11-208ENST00000621676 C9orf85Q96MD7 179 aa7.56□□□□□ -1.2
VPS11-208ENST00000621676 NXT2Q9NPJ8 142 aaKnown RBP7.56□□□□□ -1.2
VPS11-208ENST00000621676 GAGE6Q13070 117 aa7.56□□□□□ -1.2
VPS11-208ENST00000621676 ZFP2Q6ZN57 461 aa7.56□□□□□ -1.2
VPS11-208ENST00000621676 C11orf72Q8NBR9 251 aa7.56□□□□□ -1.2
VPS11-208ENST00000621676 CELA1Q9UNI1 258 aa7.56□□□□□ -1.2
VPS11-208ENST00000621676 KIF25-AS1Q9Y6Z4 181 aa7.56□□□□□ -1.2
VPS11-208ENST00000621676 RAB37Q96AX2 223 aa7.55□□□□□ -1.2
VPS11-208ENST00000621676 SPXQ9BT56 116 aa7.55□□□□□ -1.2
VPS11-208ENST00000621676 CNFNQ9BYD5 112 aa7.55□□□□□ -1.2
VPS11-208ENST00000621676 SAMD13Q5VXD3 122 aa7.55□□□□□ -1.2
VPS11-208ENST00000621676 ARL6IP6Q8N6S5 226 aa7.55□□□□□ -1.2
VPS11-208ENST00000621676 SCRT2Q9NQ03 307 aa7.55□□□□□ -1.2
VPS11-208ENST00000621676 IGLV10-54A0A075B6I4 117 aa7.54□□□□□ -1.2
VPS11-208ENST00000621676 MIEN1Q9BRT3 115 aa7.54□□□□□ -1.2
VPS11-208ENST00000621676 LINC00694P0DN24 101 aa7.54□□□□□ -1.2
VPS11-208ENST00000621676 BEAN1Q3B7T3 259 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms