RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 C5orf56Q8N8D9 126 aa9.17□□□□□ -0.94
SRRT-216ENST00000618262 OR8A1Q8NGG7 326 aa9.17□□□□□ -0.94
SRRT-216ENST00000618262 A6NDX4 124 aa9.17□□□□□ -0.94
SRRT-216ENST00000618262 ZNF56Q15929 161 aa9.17□□□□□ -0.94
SRRT-216ENST00000618262 SRSF12Q8WXF0 261 aaKnown RBP9.17□□□□□ -0.94
SRRT-216ENST00000618262 VWFP04275 2813 aa9.17□□□□□ -0.94
SRRT-216ENST00000618262 IGHV7-81A0A0B4J1V7 117 aa9.16□□□□□ -0.94
SRRT-216ENST00000618262 SYNGR2O43760 224 aa9.16□□□□□ -0.94
SRRT-216ENST00000618262 APOC4P55056 127 aa9.16□□□□□ -0.94
SRRT-216ENST00000618262 CACNG7P62955 275 aa9.16□□□□□ -0.94
SRRT-216ENST00000618262 WT1-ASQ06250 92 aa9.16□□□□□ -0.94
SRRT-216ENST00000618262 ASPHD1Q5U4P2 390 aa9.16□□□□□ -0.94
SRRT-216ENST00000618262 ATP5L2Q7Z4Y8 100 aa9.16□□□□□ -0.94
SRRT-216ENST00000618262 DPH3P1Q9H4G8 78 aa9.16□□□□□ -0.94
SRRT-216ENST00000618262 MOB4Q9Y3A3 225 aa9.16□□□□□ -0.94
SRRT-216ENST00000618262 IGHV3-35A0A0C4DH35 117 aa9.15□□□□□ -0.94
SRRT-216ENST00000618262 MYMXA0A1B0GTQ4 84 aa9.15□□□□□ -0.94
SRRT-216ENST00000618262 Q8N1Y9 231 aa9.15□□□□□ -0.94
SRRT-216ENST00000618262 Q8N6K4 173 aa9.15□□□□□ -0.94
SRRT-216ENST00000618262 HIST1H4GQ99525 98 aa9.15□□□□□ -0.94
SRRT-216ENST00000618262 C16orf95Q9H693 158 aa9.15□□□□□ -0.94
SRRT-216ENST00000618262 NOTCH3Q9UM47 2321 aa9.15□□□□□ -0.94
SRRT-216ENST00000618262 DAZ2Q13117 558 aaKnown RBP9.15□□□□□ -0.94
SRRT-216ENST00000618262 ZFP2Q6ZN57 461 aa9.15□□□□□ -0.94
SRRT-216ENST00000618262 DAZ4Q86SG3 579 aaKnown RBP9.15□□□□□ -0.94
SRRT-216ENST00000618262 NEXN-AS1Q8NBZ9 246 aa9.15□□□□□ -0.94
SRRT-216ENST00000618262 DAZ1Q9NQZ3 744 aaKnown RBP9.15□□□□□ -0.94
SRRT-216ENST00000618262 DAZ3Q9NR90 486 aaKnown RBP9.15□□□□□ -0.94
SRRT-216ENST00000618262 TRAV12-2A0A075B6T6 113 aa9.15□□□□□ -0.95
SRRT-216ENST00000618262 FAM240AA0A1B0GVK7 77 aa9.15□□□□□ -0.95
SRRT-216ENST00000618262 SLC25A20O43772 301 aa9.15□□□□□ -0.95
SRRT-216ENST00000618262 HLA-DMBP28068 263 aa9.15□□□□□ -0.95
SRRT-216ENST00000618262 FCER1GP30273 86 aa9.15□□□□□ -0.95
SRRT-216ENST00000618262 RPL27AP46776 148 aaKnown RBP9.15□□□□□ -0.95
SRRT-216ENST00000618262 UBE2D3P61077 147 aa9.15□□□□□ -0.95
SRRT-216ENST00000618262 UBE2D2P62837 147 aa9.15□□□□□ -0.95
SRRT-216ENST00000618262 NPYP01303 97 aa9.14□□□□□ -0.95
SRRT-216ENST00000618262 IGHV3OR16-8A0A075B7F1 116 aa9.14□□□□□ -0.95
SRRT-216ENST00000618262 P0C879 139 aa9.14□□□□□ -0.95
SRRT-216ENST00000618262 GATA1P15976 413 aaPredicted RBP9.14□□□□□ -0.95
SRRT-216ENST00000618262 HOXD3P31249 432 aaPredicted RBP9.14□□□□□ -0.95
SRRT-216ENST00000618262 CD164L2Q6UWJ8 174 aa9.14□□□□□ -0.95
SRRT-216ENST00000618262 ZNF414Q96IQ9 312 aa9.14□□□□□ -0.95
SRRT-216ENST00000618262 IGF2BP2-AS1Q96M15 143 aa9.14□□□□□ -0.95
SRRT-216ENST00000618262 PAX4O43316 350 aa9.13□□□□□ -0.95
SRRT-216ENST00000618262 IGHV3-11P01762 117 aa9.13□□□□□ -0.95
SRRT-216ENST00000618262 ZNF138P52744 262 aa9.13□□□□□ -0.95
SRRT-216ENST00000618262 NPC2P61916 151 aa9.13□□□□□ -0.95
SRRT-216ENST00000618262 SERTAD4-AS1Q5TG53 156 aa9.13□□□□□ -0.95
SRRT-216ENST00000618262 TMEM167AQ8TBQ9 72 aa9.13□□□□□ -0.95
SRRT-216ENST00000618262 TMEM14BQ9NUH8 114 aa9.13□□□□□ -0.95
SRRT-216ENST00000618262 ARL14EPLP0DKL9 152 aa9.13□□□□□ -0.95
SRRT-216ENST00000618262 PRR20EP86478 221 aa9.13□□□□□ -0.95
SRRT-216ENST00000618262 PRR20CP86479 221 aa9.13□□□□□ -0.95
SRRT-216ENST00000618262 PRR20DP86480 221 aa9.13□□□□□ -0.95
SRRT-216ENST00000618262 PRR20BP86481 221 aa9.13□□□□□ -0.95
SRRT-216ENST00000618262 PRR20AP86496 221 aa9.13□□□□□ -0.95
SRRT-216ENST00000618262 RNF182Q8N6D2 247 aa9.13□□□□□ -0.95
SRRT-216ENST00000618262 MYOZ3Q8TDC0 251 aa9.13□□□□□ -0.95
SRRT-216ENST00000618262 NPCDR1Q9BY65 106 aa9.13□□□□□ -0.95
SRRT-216ENST00000618262 KLK15Q9H2R5 256 aa9.13□□□□□ -0.95
SRRT-216ENST00000618262 PGPA6NDG6 321 aa9.12□□□□□ -0.95
SRRT-216ENST00000618262 NPBQ8NG41 125 aa9.12□□□□□ -0.95
SRRT-216ENST00000618262 PIGBOS1A0A0B4J2F0 54 aa9.12□□□□□ -0.95
SRRT-216ENST00000618262 NDUFA3O95167 84 aa9.12□□□□□ -0.95
SRRT-216ENST00000618262 EGR2P11161 476 aaPredicted RBP9.12□□□□□ -0.95
SRRT-216ENST00000618262 C9orf139Q6ZV77 190 aa9.12□□□□□ -0.95
SRRT-216ENST00000618262 NTN5Q8WTR8 489 aaPredicted RBP9.12□□□□□ -0.95
SRRT-216ENST00000618262 TTTY13Q9BZ97 58 aa9.12□□□□□ -0.95
SRRT-216ENST00000618262 HBBP68871 147 aa9.12□□□□□ -0.95
SRRT-216ENST00000618262 PRR26Q8N8Z3 221 aa9.12□□□□□ -0.95
SRRT-216ENST00000618262 A0A1B0GXF2 115 aa9.11□□□□□ -0.95
SRRT-216ENST00000618262 H3BT86 120 aa9.11□□□□□ -0.95
SRRT-216ENST00000618262 Q6ZSV7 163 aa9.11□□□□□ -0.95
SRRT-216ENST00000618262 FMC1Q96HJ9 113 aa9.11□□□□□ -0.95
SRRT-216ENST00000618262 NDUFA4L2Q9NRX3 87 aa9.11□□□□□ -0.95
SRRT-216ENST00000618262 IGKV2D-26A0A0A0MRZ7 120 aa9.11□□□□□ -0.95
SRRT-216ENST00000618262 SFTA2Q6UW10 78 aa9.11□□□□□ -0.95
SRRT-216ENST00000618262 EEF1AKMT3Q96AZ1 226 aa9.11□□□□□ -0.95
SRRT-216ENST00000618262 TRGV9Q99603 122 aa9.11□□□□□ -0.95
SRRT-216ENST00000618262 LINC01549A6NIU2 74 aa9.1□□□□□ -0.95
SRRT-216ENST00000618262 TRAV41A0A0B4J266 112 aa9.1□□□□□ -0.95
SRRT-216ENST00000618262 LGALS9O00182 355 aa9.1□□□□□ -0.95
SRRT-216ENST00000618262 ZNF702PQ9H963 129 aa9.1□□□□□ -0.95
SRRT-216ENST00000618262 USP17L23D6RBM5 183 aa9.09□□□□□ -0.95
SRRT-216ENST00000618262 K7EMT4 169 aa9.09□□□□□ -0.95
SRRT-216ENST00000618262 CCL24O00175 119 aa9.09□□□□□ -0.95
SRRT-216ENST00000618262 PRCDQ00LT1 54 aa9.09□□□□□ -0.95
SRRT-216ENST00000618262 C18orf65Q6ZTR6 163 aa9.09□□□□□ -0.95
SRRT-216ENST00000618262 SMIM26A0A096LP01 95 aa9.09□□□□□ -0.95
SRRT-216ENST00000618262 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.09□□□□□ -0.95
SRRT-216ENST00000618262 H3BTX0 84 aa9.09□□□□□ -0.95
SRRT-216ENST00000618262 ATOX1O00244 68 aa9.09□□□□□ -0.95
SRRT-216ENST00000618262 DEFB136Q30KP8 78 aa9.09□□□□□ -0.95
SRRT-216ENST00000618262 AAMDCQ9H7C9 122 aa9.09□□□□□ -0.95
SRRT-216ENST00000618262 MRPL36Q9P0J6 103 aaKnown RBP9.09□□□□□ -0.95
SRRT-216ENST00000618262 TRBV7-3A0A075B6L6 115 aa9.08□□□□□ -0.96
SRRT-216ENST00000618262 C19orf71A6NCJ1 209 aa9.08□□□□□ -0.96
SRRT-216ENST00000618262 HIGD1CA8MV81 97 aa9.08□□□□□ -0.96
SRRT-216ENST00000618262 P0DMU3 169 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms