RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 SMKR1H3BMG3 65 aa8.31□□□□□ -1.08
PDPN-211ENST00000617617 GAGE7O76087 117 aa8.31□□□□□ -1.08
PDPN-211ENST00000617617 NCR2O95944 276 aa8.31□□□□□ -1.08
PDPN-211ENST00000617617 GAGE12FP0CL80 117 aa8.31□□□□□ -1.08
PDPN-211ENST00000617617 GAGE12GP0CL81 117 aa8.31□□□□□ -1.08
PDPN-211ENST00000617617 GAGE12IP0CL82 117 aa8.31□□□□□ -1.08
PDPN-211ENST00000617617 PMCHP20382 165 aa8.31□□□□□ -1.08
PDPN-211ENST00000617617 SUMO2P61956 95 aaKnown RBP8.31□□□□□ -1.08
PDPN-211ENST00000617617 FHL2Q14192 279 aa8.31□□□□□ -1.08
PDPN-211ENST00000617617 ZNF479Q96JC4 524 aa8.31□□□□□ -1.08
PDPN-211ENST00000617617 DNAH9Q9NYC9 4486 aa8.31□□□□□ -1.08
PDPN-211ENST00000617617 TRBV27A0A0K0K1C4 114 aa8.31□□□□□ -1.08
PDPN-211ENST00000617617 TCAPO15273 167 aa8.31□□□□□ -1.08
PDPN-211ENST00000617617 FAM74A4Q5TZK3 123 aa8.31□□□□□ -1.08
PDPN-211ENST00000617617 NIT1Q86X76 327 aa8.31□□□□□ -1.08
PDPN-211ENST00000617617 BAGE3Q86Y29 109 aa8.31□□□□□ -1.08
PDPN-211ENST00000617617 HIST3H2BBQ8N257 126 aa8.31□□□□□ -1.08
PDPN-211ENST00000617617 LINC00614P0C842 121 aa8.3□□□□□ -1.08
PDPN-211ENST00000617617 LINC00694P0DN24 101 aa8.3□□□□□ -1.08
PDPN-211ENST00000617617 Q6ZSN1 163 aa8.3□□□□□ -1.08
PDPN-211ENST00000617617 SMIM2Q9BVW6 85 aa8.3□□□□□ -1.08
PDPN-211ENST00000617617 ST20Q9HBF5 79 aa8.3□□□□□ -1.08
PDPN-211ENST00000617617 TRGV2A0A075B6R0 118 aa8.3□□□□□ -1.08
PDPN-211ENST00000617617 K7EQD1 137 aa8.3□□□□□ -1.08
PDPN-211ENST00000617617 SERF1AO75920 110 aa8.3□□□□□ -1.08
PDPN-211ENST00000617617 IQCJQ1A5X6 159 aa8.3□□□□□ -1.08
PDPN-211ENST00000617617 F5H697 171 aa8.3□□□□□ -1.08
PDPN-211ENST00000617617 PRB2P02812 416 aaPredicted RBP8.3□□□□□ -1.08
PDPN-211ENST00000617617 NHLRC4P0CG21 123 aaPredicted RBP8.3□□□□□ -1.08
PDPN-211ENST00000617617 RPL39LQ96EH5 51 aaKnown RBP8.3□□□□□ -1.08
PDPN-211ENST00000617617 RETNQ9HD89 108 aa8.3□□□□□ -1.08
PDPN-211ENST00000617617 MRAPQ8TCY5 172 aa8.29□□□□□ -1.08
PDPN-211ENST00000617617 CELA1Q9UNI1 258 aa8.29□□□□□ -1.08
PDPN-211ENST00000617617 VCYO14598 125 aa8.29□□□□□ -1.08
PDPN-211ENST00000617617 NEXN-AS1Q8NBZ9 246 aa8.29□□□□□ -1.08
PDPN-211ENST00000617617 TMEM70Q9BUB7 260 aa8.29□□□□□ -1.08
PDPN-211ENST00000617617 IFI27P40305 119 aaPredicted RBP8.28□□□□□ -1.08
PDPN-211ENST00000617617 DEFB121Q5J5C9 76 aa8.28□□□□□ -1.08
PDPN-211ENST00000617617 ZMAT4Q9H898 229 aa8.28□□□□□ -1.08
PDPN-211ENST00000617617 EMP1P54849 157 aa8.28□□□□□ -1.08
PDPN-211ENST00000617617 DAD1P61803 113 aa8.28□□□□□ -1.08
PDPN-211ENST00000617617 RHOHQ15669 191 aa8.28□□□□□ -1.08
PDPN-211ENST00000617617 PRSS3P2Q8NHM4 247 aa8.28□□□□□ -1.08
PDPN-211ENST00000617617 C14orf144Q96I85 54 aa8.28□□□□□ -1.08
PDPN-211ENST00000617617 LINC01549A6NIU2 74 aa8.27□□□□□ -1.09
PDPN-211ENST00000617617 H3BNG1 76 aa8.27□□□□□ -1.09
PDPN-211ENST00000617617 NUPR1O60356 82 aa8.27□□□□□ -1.09
PDPN-211ENST00000617617 ATP5G1P05496 136 aa8.27□□□□□ -1.09
PDPN-211ENST00000617617 FA2HQ7L5A8 372 aa8.27□□□□□ -1.09
PDPN-211ENST00000617617 SLC25A29Q8N8R3 303 aa8.27□□□□□ -1.09
PDPN-211ENST00000617617 AP5S1Q9NUS5 200 aa8.27□□□□□ -1.09
PDPN-211ENST00000617617 C12orf74Q32Q52 190 aa8.27□□□□□ -1.09
PDPN-211ENST00000617617 MGAM2Q2M2H8 2515 aa8.27□□□□□ -1.09
PDPN-211ENST00000617617 TRBV7-3A0A075B6L6 115 aa8.26□□□□□ -1.09
PDPN-211ENST00000617617 IFITM10A6NMD0 228 aa8.26□□□□□ -1.09
PDPN-211ENST00000617617 CRYBA4P53673 196 aa8.26□□□□□ -1.09
PDPN-211ENST00000617617 PRO0255Q9UI72 69 aa8.26□□□□□ -1.09
PDPN-211ENST00000617617 NOTCH1P46531 2555 aa8.26□□□□□ -1.09
PDPN-211ENST00000617617 IGHV3-73A0A0B4J1V6 119 aa8.26□□□□□ -1.09
PDPN-211ENST00000617617 SDHAF1A6NFY7 115 aa8.26□□□□□ -1.09
PDPN-211ENST00000617617 DEFB130BP0DP73 79 aa8.26□□□□□ -1.09
PDPN-211ENST00000617617 DEFB130AP0DP74 79 aa8.26□□□□□ -1.09
PDPN-211ENST00000617617 G0S2P27469 103 aa8.26□□□□□ -1.09
PDPN-211ENST00000617617 UBE2D3P61077 147 aa8.26□□□□□ -1.09
PDPN-211ENST00000617617 UBE2D2P62837 147 aa8.26□□□□□ -1.09
PDPN-211ENST00000617617 ORMDL2Q53FV1 153 aa8.26□□□□□ -1.09
PDPN-211ENST00000617617 PRADC1Q9BSG0 188 aa8.26□□□□□ -1.09
PDPN-211ENST00000617617 TRGV4A0A0C4DH28 118 aa8.25□□□□□ -1.09
PDPN-211ENST00000617617 I3L3M4 83 aa8.25□□□□□ -1.09
PDPN-211ENST00000617617 DAZ4Q86SG3 579 aaKnown RBP8.25□□□□□ -1.09
PDPN-211ENST00000617617 TMEM18Q96B42 140 aa8.25□□□□□ -1.09
PDPN-211ENST00000617617 DAZ3Q9NR90 486 aaKnown RBP8.25□□□□□ -1.09
PDPN-211ENST00000617617 HHLA3Q9XRX5 114 aa8.25□□□□□ -1.09
PDPN-211ENST00000617617 TNFRSF18Q9Y5U5 241 aa8.25□□□□□ -1.09
PDPN-211ENST00000617617 LAGE3Q14657 143 aa8.25□□□□□ -1.09
PDPN-211ENST00000617617 RNASEKQ6P5S7 137 aaKnown RBP8.25□□□□□ -1.09
PDPN-211ENST00000617617 HIST1H2BLQ99880 126 aa8.25□□□□□ -1.09
PDPN-211ENST00000617617 TRAV26-1A0A087WT03 109 aa8.25□□□□□ -1.09
PDPN-211ENST00000617617 IGHV1-24A0A0C4DH33 117 aa8.25□□□□□ -1.09
PDPN-211ENST00000617617 A0A0J9YWU9 116 aa8.25□□□□□ -1.09
PDPN-211ENST00000617617 DEFB4AO15263 64 aa8.25□□□□□ -1.09
PDPN-211ENST00000617617 FCER1GP30273 86 aa8.25□□□□□ -1.09
PDPN-211ENST00000617617 RPL36AP83881 106 aaKnown RBP8.25□□□□□ -1.09
PDPN-211ENST00000617617 PDZD11Q5EBL8 140 aa8.25□□□□□ -1.09
PDPN-211ENST00000617617 RPL36ALQ969Q0 106 aaKnown RBP8.25□□□□□ -1.09
PDPN-211ENST00000617617 GTSF1LQ9H1H1 148 aa8.25□□□□□ -1.09
PDPN-211ENST00000617617 A0A096LNJ9 63 aa8.24□□□□□ -1.09
PDPN-211ENST00000617617 LOC389332A0A1B0GUA5 103 aa8.24□□□□□ -1.09
PDPN-211ENST00000617617 HSBP1O75506 76 aa8.24□□□□□ -1.09
PDPN-211ENST00000617617 TSHBP01222 138 aa8.24□□□□□ -1.09
PDPN-211ENST00000617617 TMEM97Q5BJF2 176 aa8.24□□□□□ -1.09
PDPN-211ENST00000617617 KIR2DL4Q99706 377 aa8.24□□□□□ -1.09
PDPN-211ENST00000617617 P0DMU3 169 aa8.23□□□□□ -1.09
PDPN-211ENST00000617617 FAM231AP0DMU4 169 aa8.23□□□□□ -1.09
PDPN-211ENST00000617617 FAM231CP0DMU5 169 aa8.23□□□□□ -1.09
PDPN-211ENST00000617617 NBEAL2Q6ZNJ1 2754 aa8.23□□□□□ -1.09
PDPN-211ENST00000617617 HBDP02042 147 aa8.23□□□□□ -1.09
PDPN-211ENST00000617617 NPSP0C0P6 89 aa8.23□□□□□ -1.09
PDPN-211ENST00000617617 S100A2P29034 98 aa8.23□□□□□ -1.09
PDPN-211ENST00000617617 SH2D6Q7Z4S9 175 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms