RNA–Protein interactions for RNA: ENST00000615317.4

MMP28-205, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-205ENST00000615317 SRIP30626 198 aa6.35□□□□□ -1.39
MMP28-205ENST00000615317 RPS10P46783 165 aaKnown RBP6.35□□□□□ -1.39
MMP28-205ENST00000615317 OR10J3Q5JRS4 329 aa6.35□□□□□ -1.39
MMP28-205ENST00000615317 NEXN-AS1Q8NBZ9 246 aa6.35□□□□□ -1.39
MMP28-205ENST00000615317 FRZBQ92765 325 aa6.35□□□□□ -1.39
MMP28-205ENST00000615317 MRAP2Q96G30 205 aa6.35□□□□□ -1.39
MMP28-205ENST00000615317 KLK5Q9Y337 293 aaPredicted RBP6.35□□□□□ -1.39
MMP28-205ENST00000615317 DYNC2H1Q8NCM8 4307 aaKnown RBP6.34□□□□□ -1.39
MMP28-205ENST00000615317 TRBV10-1A0A0K0K1A3 114 aa6.34□□□□□ -1.39
MMP28-205ENST00000615317 MT-ND6P03923 174 aa6.34□□□□□ -1.39
MMP28-205ENST00000615317 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.34□□□□□ -1.39
MMP28-205ENST00000615317 C15orf53Q8NAA6 179 aa6.34□□□□□ -1.39
MMP28-205ENST00000615317 MRPL18Q9H0U6 180 aaKnown RBP6.34□□□□□ -1.39
MMP28-205ENST00000615317 CSMD3Q7Z407 3707 aa6.33□□□□□ -1.4
MMP28-205ENST00000615317 IGHV3-38A0A0C4DH36 116 aa6.33□□□□□ -1.4
MMP28-205ENST00000615317 NPYP01303 97 aa6.33□□□□□ -1.4
MMP28-205ENST00000615317 APCSP02743 223 aa6.33□□□□□ -1.4
MMP28-205ENST00000615317 CKS2P33552 79 aa6.33□□□□□ -1.4
MMP28-205ENST00000615317 RPL36AP83881 106 aaKnown RBP6.33□□□□□ -1.4
MMP28-205ENST00000615317 KIAA1644Q3SXP7 199 aa6.33□□□□□ -1.4
MMP28-205ENST00000615317 COX19Q49B96 90 aa6.33□□□□□ -1.4
MMP28-205ENST00000615317 CASC10Q5T4H9 136 aa6.33□□□□□ -1.4
MMP28-205ENST00000615317 NEGR1Q7Z3B1 354 aa6.33□□□□□ -1.4
MMP28-205ENST00000615317 NRACQ8N912 160 aa6.33□□□□□ -1.4
MMP28-205ENST00000615317 ZNRF2Q8NHG8 242 aa6.33□□□□□ -1.4
MMP28-205ENST00000615317 RPL36ALQ969Q0 106 aaKnown RBP6.33□□□□□ -1.4
MMP28-205ENST00000615317 GNB1LQ9BYB4 327 aa6.33□□□□□ -1.4
MMP28-205ENST00000615317 PLECQ15149 4684 aaKnown RBP6.33□□□□□ -1.4
MMP28-205ENST00000615317 H3BNG1 76 aa6.32□□□□□ -1.4
MMP28-205ENST00000615317 C3orf84H3BNL1 204 aa6.32□□□□□ -1.4
MMP28-205ENST00000615317 UBE2D3P61077 147 aa6.32□□□□□ -1.4
MMP28-205ENST00000615317 UBE2D2P62837 147 aa6.32□□□□□ -1.4
MMP28-205ENST00000615317 MRPL23Q16540 153 aaKnown RBP6.32□□□□□ -1.4
MMP28-205ENST00000615317 ORMDL3Q8N138 153 aa6.32□□□□□ -1.4
MMP28-205ENST00000615317 DEFB104AQ8WTQ1 72 aa6.32□□□□□ -1.4
MMP28-205ENST00000615317 PRELID3AQ96N28 172 aa6.32□□□□□ -1.4
MMP28-205ENST00000615317 APLNQ9ULZ1 77 aa6.32□□□□□ -1.4
MMP28-205ENST00000615317 TRAPPC1Q9Y5R8 145 aa6.32□□□□□ -1.4
MMP28-205ENST00000615317 TNFRSF18Q9Y5U5 241 aa6.32□□□□□ -1.4
MMP28-205ENST00000615317 TRBV7-3A0A075B6L6 115 aa6.31□□□□□ -1.4
MMP28-205ENST00000615317 SDHAF1A6NFY7 115 aa6.31□□□□□ -1.4
MMP28-205ENST00000615317 COLCA2A8K830 154 aa6.31□□□□□ -1.4
MMP28-205ENST00000615317 TNFRSF6BO95407 300 aa6.31□□□□□ -1.4
MMP28-205ENST00000615317 RAB5AP20339 215 aa6.31□□□□□ -1.4
MMP28-205ENST00000615317 FABP9Q0Z7S8 132 aa6.31□□□□□ -1.4
MMP28-205ENST00000615317 NIT2Q9NQR4 276 aa6.31□□□□□ -1.4
MMP28-205ENST00000615317 ALMS1Q8TCU4 4167 aa6.31□□□□□ -1.4
MMP28-205ENST00000615317 PPBPP02775 128 aa6.3□□□□□ -1.4
MMP28-205ENST00000615317 SUMO2P61956 95 aaKnown RBP6.3□□□□□ -1.4
MMP28-205ENST00000615317 UBE2DNLQ8IWF7 75 aa6.3□□□□□ -1.4
MMP28-205ENST00000615317 ATP6V0E2Q8NHE4 81 aa6.3□□□□□ -1.4
MMP28-205ENST00000615317 DNAJC30Q96LL9 226 aa6.3□□□□□ -1.4
MMP28-205ENST00000615317 TMEM70Q9BUB7 260 aa6.3□□□□□ -1.4
MMP28-205ENST00000615317 ST20Q9HBF5 79 aa6.3□□□□□ -1.4
MMP28-205ENST00000615317 TRBV6-5A0A0K0K1A5 114 aa6.29□□□□□ -1.4
MMP28-205ENST00000615317 TRGC2P03986 189 aa6.29□□□□□ -1.4
MMP28-205ENST00000615317 IQCJQ1A5X6 159 aa6.29□□□□□ -1.4
MMP28-205ENST00000615317 SMIM2Q9BVW6 85 aa6.29□□□□□ -1.4
MMP28-205ENST00000615317 MAP1LC3AQ9H492 121 aa6.29□□□□□ -1.4
MMP28-205ENST00000615317 LOC389332A0A1B0GUA5 103 aa6.28□□□□□ -1.4
MMP28-205ENST00000615317 PHOX2AO14813 284 aa6.28□□□□□ -1.4
MMP28-205ENST00000615317 PPP1R17O96001 155 aa6.28□□□□□ -1.4
MMP28-205ENST00000615317 TCTAP57738 103 aa6.28□□□□□ -1.4
MMP28-205ENST00000615317 SH2D6Q7Z4S9 175 aa6.28□□□□□ -1.4
MMP28-205ENST00000615317 DAZ4Q86SG3 579 aaKnown RBP6.28□□□□□ -1.4
MMP28-205ENST00000615317 ALKBH7Q9BT30 221 aaPredicted RBP6.28□□□□□ -1.4
MMP28-205ENST00000615317 DAZ3Q9NR90 486 aaKnown RBP6.28□□□□□ -1.4
MMP28-205ENST00000615317 LAMTOR2Q9Y2Q5 125 aa6.28□□□□□ -1.4
MMP28-205ENST00000615317 LINC00588Q9Y4M8 146 aa6.28□□□□□ -1.4
MMP28-205ENST00000615317 TSHBP01222 138 aa6.27□□□□□ -1.41
MMP28-205ENST00000615317 COTL1Q14019 142 aa6.27□□□□□ -1.41
MMP28-205ENST00000615317 ESRGQ1W209 222 aa6.27□□□□□ -1.41
MMP28-205ENST00000615317 LYPD5Q6UWN5 251 aa6.27□□□□□ -1.41
MMP28-205ENST00000615317 WFDC10BQ8IUB3 73 aa6.27□□□□□ -1.41
MMP28-205ENST00000615317 C20orf78Q9BR46 151 aa6.27□□□□□ -1.41
MMP28-205ENST00000615317 GTSF1LQ9H1H1 148 aa6.27□□□□□ -1.41
MMP28-205ENST00000615317 TRBV27A0A0K0K1C4 114 aa6.26□□□□□ -1.41
MMP28-205ENST00000615317 I3L3M4 83 aa6.26□□□□□ -1.41
MMP28-205ENST00000615317 PMCHP20382 165 aa6.26□□□□□ -1.41
MMP28-205ENST00000615317 FCER1GP30273 86 aa6.26□□□□□ -1.41
MMP28-205ENST00000615317 AMTP48728 403 aa6.26□□□□□ -1.41
MMP28-205ENST00000615317 POLR2KP53803 58 aaKnown RBP6.26□□□□□ -1.41
MMP28-205ENST00000615317 CCL18P55774 89 aa6.26□□□□□ -1.41
MMP28-205ENST00000615317 LELP1Q5T871 98 aa6.26□□□□□ -1.41
MMP28-205ENST00000615317 NTM-AS1Q6ZSK4 140 aa6.26□□□□□ -1.41
MMP28-205ENST00000615317 C18orf32Q8TCD1 76 aa6.26□□□□□ -1.41
MMP28-205ENST00000615317 LINC00476Q8WZB0 136 aa6.26□□□□□ -1.41
MMP28-205ENST00000615317 MRPS16Q9Y3D3 137 aaKnown RBP6.26□□□□□ -1.41
MMP28-205ENST00000615317 TRBV25-1A0A075B6N4 114 aa6.25□□□□□ -1.41
MMP28-205ENST00000615317 TRBV6-8A0A0A6YYG3 113 aa6.25□□□□□ -1.41
MMP28-205ENST00000615317 IGHV1-24A0A0C4DH33 117 aa6.25□□□□□ -1.41
MMP28-205ENST00000615317 TCAPO15273 167 aa6.25□□□□□ -1.41
MMP28-205ENST00000615317 IFI27P40305 119 aaPredicted RBP6.25□□□□□ -1.41
MMP28-205ENST00000615317 TIRAPP58753 221 aa6.25□□□□□ -1.41
MMP28-205ENST00000615317 Q8N3U1 123 aa6.25□□□□□ -1.41
MMP28-205ENST00000615317 KIR2DL4Q99706 377 aa6.25□□□□□ -1.41
MMP28-205ENST00000615317 TENM2Q9NT68 2774 aa6.25□□□□□ -1.41
MMP28-205ENST00000615317 LYSTQ99698 3801 aa6.25□□□□□ -1.41
MMP28-205ENST00000615317 IGLV2-18A0A075B6J9 118 aa6.24□□□□□ -1.41
MMP28-205ENST00000615317 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms