RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 MT1FP04733 61 aa2.35□□□□□ -2.03
HERC3-213ENST00000598772 MALP21145 153 aa2.35□□□□□ -2.03
HERC3-213ENST00000598772 ZNF80P51504 273 aaPredicted RBP2.35□□□□□ -2.03
HERC3-213ENST00000598772 SSTP61278 116 aa2.35□□□□□ -2.03
HERC3-213ENST00000598772 CTF1Q16619 201 aa2.35□□□□□ -2.03
HERC3-213ENST00000598772 RNASEKQ6P5S7 137 aaKnown RBP2.35□□□□□ -2.03
HERC3-213ENST00000598772 NRARPQ7Z6K4 114 aa2.35□□□□□ -2.03
HERC3-213ENST00000598772 TMEM252Q8N6L7 170 aa2.35□□□□□ -2.03
HERC3-213ENST00000598772 SAMD12Q8N8I0 201 aa2.35□□□□□ -2.03
HERC3-213ENST00000598772 NUP35Q8NFH5 326 aa2.35□□□□□ -2.03
HERC3-213ENST00000598772 CMTM2Q8TAZ6 248 aa2.35□□□□□ -2.03
HERC3-213ENST00000598772 DYNC2LI1Q8TCX1 351 aa2.35□□□□□ -2.03
HERC3-213ENST00000598772 PHYHIPLQ96FC7 376 aa2.35□□□□□ -2.03
HERC3-213ENST00000598772 MGST2Q99735 147 aa2.35□□□□□ -2.03
HERC3-213ENST00000598772 NDFIP1Q9BT67 221 aa2.35□□□□□ -2.03
HERC3-213ENST00000598772 TMEM14CQ9P0S9 112 aa2.35□□□□□ -2.03
HERC3-213ENST00000598772 A0A0B4J2A0 478 aa2.34□□□□□ -2.03
HERC3-213ENST00000598772 A0A1B0GUV1 79 aa2.34□□□□□ -2.03
HERC3-213ENST00000598772 SMIM31A0A1B0GVY4 71 aa2.34□□□□□ -2.03
HERC3-213ENST00000598772 C19orf71A6NCJ1 209 aa2.34□□□□□ -2.03
HERC3-213ENST00000598772 CCL25O15444 150 aa2.34□□□□□ -2.03
HERC3-213ENST00000598772 ARMS2P0C7Q2 107 aa2.34□□□□□ -2.03
HERC3-213ENST00000598772 DEFA3P59666 94 aa2.34□□□□□ -2.03
HERC3-213ENST00000598772 GNGT1P63211 74 aa2.34□□□□□ -2.03
HERC3-213ENST00000598772 IQCJQ1A5X6 159 aa2.34□□□□□ -2.03
HERC3-213ENST00000598772 FAM229BQ4G0N7 80 aa2.34□□□□□ -2.03
HERC3-213ENST00000598772 PIK3CD-AS1Q5SR53 167 aa2.34□□□□□ -2.03
HERC3-213ENST00000598772 AMMECR1LQ6DCA0 310 aa2.34□□□□□ -2.03
HERC3-213ENST00000598772 CLVS1Q8IUQ0 354 aaPredicted RBP2.34□□□□□ -2.03
HERC3-213ENST00000598772 OR2D3Q8NGH3 330 aa2.34□□□□□ -2.03
HERC3-213ENST00000598772 OR10G8Q8NGN5 311 aa2.34□□□□□ -2.03
HERC3-213ENST00000598772 SFRP2Q96HF1 295 aa2.34□□□□□ -2.03
HERC3-213ENST00000598772 TXNL4BQ9NX01 149 aaKnown RBP2.34□□□□□ -2.03
HERC3-213ENST00000598772 SHPKQ9UHJ6 478 aa2.34□□□□□ -2.03
HERC3-213ENST00000598772 BCL2L11O43521 198 aa2.33□□□□□ -2.04
HERC3-213ENST00000598772 SSSCA1O60232 199 aa2.33□□□□□ -2.04
HERC3-213ENST00000598772 NUPR1O60356 82 aa2.33□□□□□ -2.04
HERC3-213ENST00000598772 OR7C2O60412 319 aa2.33□□□□□ -2.04
HERC3-213ENST00000598772 TSC22D2O75157 780 aa2.33□□□□□ -2.04
HERC3-213ENST00000598772 RAB3DO95716 219 aa2.33□□□□□ -2.04
HERC3-213ENST00000598772 UBE2AP49459 152 aa2.33□□□□□ -2.04
HERC3-213ENST00000598772 RAB4BP61018 213 aa2.33□□□□□ -2.04
HERC3-213ENST00000598772 CTAG1AP78358 180 aa2.33□□□□□ -2.04
HERC3-213ENST00000598772 LRRC37A5PQ49AS3 106 aa2.33□□□□□ -2.04
HERC3-213ENST00000598772 UBE2NLQ5JXB2 153 aa2.33□□□□□ -2.04
HERC3-213ENST00000598772 FAAP20Q6NZ36 180 aa2.33□□□□□ -2.04
HERC3-213ENST00000598772 MIR17HGQ75NE6 70 aa2.33□□□□□ -2.04
HERC3-213ENST00000598772 SLC25A2Q9BXI2 301 aa2.33□□□□□ -2.04
HERC3-213ENST00000598772 NDUFB11Q9NX14 153 aa2.33□□□□□ -2.04
HERC3-213ENST00000598772 OR5AC2Q9NZP5 309 aa2.33□□□□□ -2.04
HERC3-213ENST00000598772 TMSB15BA0A087X1C1 80 aa2.32□□□□□ -2.04
HERC3-213ENST00000598772 B4DEV8 164 aa2.32□□□□□ -2.04
HERC3-213ENST00000598772 MBPP02686 304 aaPredicted RBP2.32□□□□□ -2.04
HERC3-213ENST00000598772 ANXA3P12429 323 aa2.32□□□□□ -2.04
HERC3-213ENST00000598772 TPT1P13693 172 aaKnown RBP2.32□□□□□ -2.04
HERC3-213ENST00000598772 SMUG1Q53HV7 270 aa2.32□□□□□ -2.04
HERC3-213ENST00000598772 GCSAMLQ5JQS6 135 aa2.32□□□□□ -2.04
HERC3-213ENST00000598772 KRTAP7-1Q8IUC3 87 aa2.32□□□□□ -2.04
HERC3-213ENST00000598772 IMMP2LQ96T52 175 aa2.32□□□□□ -2.04
HERC3-213ENST00000598772 IL36BQ9NZH7 164 aa2.32□□□□□ -2.04
HERC3-213ENST00000598772 FLVCR2Q9UPI3 526 aa2.32□□□□□ -2.04
HERC3-213ENST00000598772 TPRKBQ9Y3C4 175 aa2.32□□□□□ -2.04
HERC3-213ENST00000598772 IGKV3D-20A0A0C4DH25 116 aa2.31□□□□□ -2.04
HERC3-213ENST00000598772 MUC21A0A140T8X8 626 aa2.31□□□□□ -2.04
HERC3-213ENST00000598772 BCE1O60756 84 aa2.31□□□□□ -2.04
HERC3-213ENST00000598772 SCGB1D2O95969 90 aa2.31□□□□□ -2.04
HERC3-213ENST00000598772 RPL12P30050 165 aaKnown RBP2.31□□□□□ -2.04
HERC3-213ENST00000598772 GNG5P63218 68 aa2.31□□□□□ -2.04
HERC3-213ENST00000598772 BAXQ07812 192 aa2.31□□□□□ -2.04
HERC3-213ENST00000598772 IAH1Q2TAA2 248 aaPredicted RBP2.31□□□□□ -2.04
HERC3-213ENST00000598772 ZFP1Q6P2D0 407 aa2.31□□□□□ -2.04
HERC3-213ENST00000598772 PRNTQ86SH4 94 aa2.31□□□□□ -2.04
HERC3-213ENST00000598772 Q8NBF4 154 aa2.31□□□□□ -2.04
HERC3-213ENST00000598772 TMED6Q8WW62 240 aa2.31□□□□□ -2.04
HERC3-213ENST00000598772 FXYD5Q96DB9 178 aa2.31□□□□□ -2.04
HERC3-213ENST00000598772 LYRM2Q9NU23 88 aaPredicted RBP2.31□□□□□ -2.04
HERC3-213ENST00000598772 UQCC1Q9NVA1 299 aa2.31□□□□□ -2.04
HERC3-213ENST00000598772 A6NHS1 94 aa2.3□□□□□ -2.04
HERC3-213ENST00000598772 RPL37AP8A6NKH3 93 aa2.3□□□□□ -2.04
HERC3-213ENST00000598772 DISC1C4P0D8 188 aa2.3□□□□□ -2.04
HERC3-213ENST00000598772 FNDC10F2Z333 226 aa2.3□□□□□ -2.04
HERC3-213ENST00000598772 H3BMQ9 156 aa2.3□□□□□ -2.04
HERC3-213ENST00000598772 BCAP31P51572 246 aa2.3□□□□□ -2.04
HERC3-213ENST00000598772 NKX2-5P52952 324 aaPredicted RBP2.3□□□□□ -2.04
HERC3-213ENST00000598772 RPS20P60866 119 aaKnown RBP2.3□□□□□ -2.04
HERC3-213ENST00000598772 UBE2L3P68036 154 aaKnown RBP2.3□□□□□ -2.04
HERC3-213ENST00000598772 LBHQ53QV2 105 aaPredicted RBP2.3□□□□□ -2.04
HERC3-213ENST00000598772 SPANXN2Q5MJ10 180 aa2.3□□□□□ -2.04
HERC3-213ENST00000598772 FAM74A1Q5RGS3 127 aa2.3□□□□□ -2.04
HERC3-213ENST00000598772 ZFP82Q8N141 532 aa2.3□□□□□ -2.04
HERC3-213ENST00000598772 FAM167A-AS1Q96KT0 104 aa2.3□□□□□ -2.04
HERC3-213ENST00000598772 PGLYRP4Q96LB8 373 aa2.3□□□□□ -2.04
HERC3-213ENST00000598772 MARVELD1Q9BSK0 173 aa2.3□□□□□ -2.04
HERC3-213ENST00000598772 GPR132Q9UNW8 380 aa2.3□□□□□ -2.04
HERC3-213ENST00000598772 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.29□□□□□ -2.04
HERC3-213ENST00000598772 UBE2L5PA0A1B0GUS4 154 aa2.29□□□□□ -2.04
HERC3-213ENST00000598772 LINC00959A0A1B0GUT2 108 aa2.29□□□□□ -2.04
HERC3-213ENST00000598772 IGKV2-29A2NJV5 120 aaPredicted RBP2.29□□□□□ -2.04
HERC3-213ENST00000598772 COX7A2LO14548 114 aa2.29□□□□□ -2.04
HERC3-213ENST00000598772 TNFRSF6BO95407 300 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms