RNA–Protein interactions for RNA: ENST00000594399.1

USE1-204, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-204ENST00000594399 LOC100131303A0A0U1RQF7 123 aa7.58□□□□□ -1.2
USE1-204ENST00000594399 SMKR1H3BMG3 65 aa7.58□□□□□ -1.2
USE1-204ENST00000594399 RPS10P46783 165 aaKnown RBP7.58□□□□□ -1.2
USE1-204ENST00000594399 RPL36AP83881 106 aaKnown RBP7.58□□□□□ -1.2
USE1-204ENST00000594399 FABP9Q0Z7S8 132 aa7.58□□□□□ -1.2
USE1-204ENST00000594399 OR10J3Q5JRS4 329 aa7.58□□□□□ -1.2
USE1-204ENST00000594399 CASC10Q5T4H9 136 aa7.58□□□□□ -1.2
USE1-204ENST00000594399 NEXN-AS1Q8NBZ9 246 aa7.58□□□□□ -1.2
USE1-204ENST00000594399 RPL36ALQ969Q0 106 aaKnown RBP7.58□□□□□ -1.2
USE1-204ENST00000594399 DNAJC30Q96LL9 226 aa7.58□□□□□ -1.2
USE1-204ENST00000594399 KLK5Q9Y337 293 aaPredicted RBP7.58□□□□□ -1.2
USE1-204ENST00000594399 STARD9Q9P2P6 4700 aa7.58□□□□□ -1.2
USE1-204ENST00000594399 DYNC2H1Q8NCM8 4307 aaKnown RBP7.57□□□□□ -1.2
USE1-204ENST00000594399 GAGE12JA6NER3 117 aa7.57□□□□□ -1.2
USE1-204ENST00000594399 IGLL5B9A064 214 aa7.57□□□□□ -1.2
USE1-204ENST00000594399 GAS8-AS1O95177 125 aa7.57□□□□□ -1.2
USE1-204ENST00000594399 PPP1R17O96001 155 aa7.57□□□□□ -1.2
USE1-204ENST00000594399 GAGE1Q13065 139 aa7.57□□□□□ -1.2
USE1-204ENST00000594399 GAGE4Q13068 117 aa7.57□□□□□ -1.2
USE1-204ENST00000594399 GAGE5Q13069 117 aa7.57□□□□□ -1.2
USE1-204ENST00000594399 KIAA1644Q3SXP7 199 aa7.57□□□□□ -1.2
USE1-204ENST00000594399 GAGE13Q4V321 117 aa7.57□□□□□ -1.2
USE1-204ENST00000594399 NRACQ8N912 160 aa7.57□□□□□ -1.2
USE1-204ENST00000594399 C15orf53Q8NAA6 179 aa7.57□□□□□ -1.2
USE1-204ENST00000594399 RPL39LQ96EH5 51 aaKnown RBP7.57□□□□□ -1.2
USE1-204ENST00000594399 NIT2Q9NQR4 276 aa7.57□□□□□ -1.2
USE1-204ENST00000594399 LAMTOR2Q9Y2Q5 125 aa7.57□□□□□ -1.2
USE1-204ENST00000594399 TNFRSF18Q9Y5U5 241 aa7.57□□□□□ -1.2
USE1-204ENST00000594399 ICOSQ9Y6W8 199 aa7.57□□□□□ -1.2
USE1-204ENST00000594399 TRBV7-3A0A075B6L6 115 aa7.56□□□□□ -1.2
USE1-204ENST00000594399 TRBV6-5A0A0K0K1A5 114 aa7.56□□□□□ -1.2
USE1-204ENST00000594399 LINC00694P0DN24 101 aa7.56□□□□□ -1.2
USE1-204ENST00000594399 SRIP30626 198 aa7.56□□□□□ -1.2
USE1-204ENST00000594399 MRPL23Q16540 153 aaKnown RBP7.56□□□□□ -1.2
USE1-204ENST00000594399 ZFAND6Q6FIF0 208 aa7.56□□□□□ -1.2
USE1-204ENST00000594399 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.56□□□□□ -1.2
USE1-204ENST00000594399 ZNRF2Q8NHG8 242 aa7.56□□□□□ -1.2
USE1-204ENST00000594399 PRELID3AQ96N28 172 aa7.56□□□□□ -1.2
USE1-204ENST00000594399 Q9UF83 564 aa7.56□□□□□ -1.2
USE1-204ENST00000594399 PHOX2AO14813 284 aa7.55□□□□□ -1.2
USE1-204ENST00000594399 TNFRSF6BO95407 300 aa7.55□□□□□ -1.2
USE1-204ENST00000594399 NUDT3O95989 172 aa7.55□□□□□ -1.2
USE1-204ENST00000594399 NPYP01303 97 aa7.55□□□□□ -1.2
USE1-204ENST00000594399 UBE2D3P61077 147 aa7.55□□□□□ -1.2
USE1-204ENST00000594399 UBE2D2P62837 147 aa7.55□□□□□ -1.2
USE1-204ENST00000594399 SH2D6Q7Z4S9 175 aa7.55□□□□□ -1.2
USE1-204ENST00000594399 ST20Q9HBF5 79 aa7.55□□□□□ -1.2
USE1-204ENST00000594399 A0A096LPF7 62 aa7.54□□□□□ -1.2
USE1-204ENST00000594399 SDHAF1A6NFY7 115 aa7.54□□□□□ -1.2
USE1-204ENST00000594399 TRGC2P03986 189 aa7.54□□□□□ -1.2
USE1-204ENST00000594399 TCTAP57738 103 aa7.54□□□□□ -1.2
USE1-204ENST00000594399 SUMO2P61956 95 aaKnown RBP7.54□□□□□ -1.2
USE1-204ENST00000594399 C20orf78Q9BR46 151 aa7.54□□□□□ -1.2
USE1-204ENST00000594399 ALKBH7Q9BT30 221 aaPredicted RBP7.54□□□□□ -1.2
USE1-204ENST00000594399 TMEM70Q9BUB7 260 aa7.54□□□□□ -1.2
USE1-204ENST00000594399 TENM2Q9NT68 2774 aa7.54□□□□□ -1.2
USE1-204ENST00000594399 NEGR1Q7Z3B1 354 aa7.53□□□□□ -1.2
USE1-204ENST00000594399 DAZ4Q86SG3 579 aaKnown RBP7.53□□□□□ -1.2
USE1-204ENST00000594399 ATP6V0E2Q8NHE4 81 aa7.53□□□□□ -1.2
USE1-204ENST00000594399 MAP1LC3AQ9H492 121 aa7.53□□□□□ -1.2
USE1-204ENST00000594399 DAZ3Q9NR90 486 aaKnown RBP7.53□□□□□ -1.2
USE1-204ENST00000594399 CSMD3Q7Z407 3707 aa7.52□□□□□ -1.21
USE1-204ENST00000594399 RPL32P62910 135 aaKnown RBP7.52□□□□□ -1.21
USE1-204ENST00000594399 SMIM2Q9BVW6 85 aa7.52□□□□□ -1.21
USE1-204ENST00000594399 APLNQ9ULZ1 77 aa7.52□□□□□ -1.21
USE1-204ENST00000594399 IGHV3-38A0A0C4DH36 116 aa7.51□□□□□ -1.21
USE1-204ENST00000594399 TRBV27A0A0K0K1C4 114 aa7.51□□□□□ -1.21
USE1-204ENST00000594399 PMCHP20382 165 aa7.51□□□□□ -1.21
USE1-204ENST00000594399 POLR2KP53803 58 aaKnown RBP7.51□□□□□ -1.21
USE1-204ENST00000594399 GTSF1LQ9H1H1 148 aa7.51□□□□□ -1.21
USE1-204ENST00000594399 PLECQ15149 4684 aaKnown RBP7.51□□□□□ -1.21
USE1-204ENST00000594399 RYR3Q15413 4870 aa7.5□□□□□ -1.21
USE1-204ENST00000594399 LOC389332A0A1B0GUA5 103 aa7.5□□□□□ -1.21
USE1-204ENST00000594399 PRSS47A8MTI9 375 aa7.5□□□□□ -1.21
USE1-204ENST00000594399 I3L3M4 83 aa7.5□□□□□ -1.21
USE1-204ENST00000594399 VCYO14598 125 aa7.5□□□□□ -1.21
USE1-204ENST00000594399 TIRAPP58753 221 aa7.5□□□□□ -1.21
USE1-204ENST00000594399 COTL1Q14019 142 aa7.5□□□□□ -1.21
USE1-204ENST00000594399 TMEM97Q5BJF2 176 aa7.5□□□□□ -1.21
USE1-204ENST00000594399 KIR2DL4Q99706 377 aa7.5□□□□□ -1.21
USE1-204ENST00000594399 NXT2Q9NPJ8 142 aaKnown RBP7.5□□□□□ -1.21
USE1-204ENST00000594399 IQCJQ1A5X6 159 aa7.49□□□□□ -1.21
USE1-204ENST00000594399 LYPD5Q6UWN5 251 aa7.49□□□□□ -1.21
USE1-204ENST00000594399 C18orf32Q8TCD1 76 aa7.49□□□□□ -1.21
USE1-204ENST00000594399 IGLV2-18A0A075B6J9 118 aa7.48□□□□□ -1.21
USE1-204ENST00000594399 IGHV1-24A0A0C4DH33 117 aa7.48□□□□□ -1.21
USE1-204ENST00000594399 LCE6AA0A183 80 aa7.48□□□□□ -1.21
USE1-204ENST00000594399 C1orf196B1AJZ1 125 aa7.48□□□□□ -1.21
USE1-204ENST00000594399 TCAPO15273 167 aa7.48□□□□□ -1.21
USE1-204ENST00000594399 TSHBP01222 138 aa7.48□□□□□ -1.21
USE1-204ENST00000594399 FCER1GP30273 86 aa7.48□□□□□ -1.21
USE1-204ENST00000594399 CCL18P55774 89 aa7.48□□□□□ -1.21
USE1-204ENST00000594399 Q8N8P6 123 aa7.48□□□□□ -1.21
USE1-204ENST00000594399 TRBV25-1A0A075B6N4 114 aa7.47□□□□□ -1.21
USE1-204ENST00000594399 TRBV6-8A0A0A6YYG3 113 aa7.47□□□□□ -1.21
USE1-204ENST00000594399 IFI27P40305 119 aaPredicted RBP7.47□□□□□ -1.21
USE1-204ENST00000594399 AMTP48728 403 aa7.47□□□□□ -1.21
USE1-204ENST00000594399 ESRGQ1W209 222 aa7.47□□□□□ -1.21
USE1-204ENST00000594399 LELP1Q5T871 98 aa7.47□□□□□ -1.21
USE1-204ENST00000594399 NTM-AS1Q6ZSK4 140 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms