RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 C10orf126Q8N4M7 172 aa8.54□□□□□ -1.04
ZNF540-210ENST00000592533 UBE2E2Q96LR5 201 aa8.54□□□□□ -1.04
ZNF540-210ENST00000592533 FSHBP01225 129 aa8.54□□□□□ -1.04
ZNF540-210ENST00000592533 LGALS3P17931 250 aaKnown RBP8.54□□□□□ -1.04
ZNF540-210ENST00000592533 AZU1P20160 251 aa8.54□□□□□ -1.04
ZNF540-210ENST00000592533 NACAE9PAV3 2078 aa8.54□□□□□ -1.04
ZNF540-210ENST00000592533 IGLV4-3A0A075B6K6 122 aa8.54□□□□□ -1.04
ZNF540-210ENST00000592533 ZNF22P17026 224 aaPredicted RBP8.54□□□□□ -1.04
ZNF540-210ENST00000592533 SYNJ2BPP57105 145 aa8.54□□□□□ -1.04
ZNF540-210ENST00000592533 PTH2Q96A98 100 aa8.54□□□□□ -1.04
ZNF540-210ENST00000592533 RHODO00212 210 aa8.53□□□□□ -1.04
ZNF540-210ENST00000592533 APOMO95445 188 aa8.53□□□□□ -1.04
ZNF540-210ENST00000592533 FOXI1Q12951 378 aa8.53□□□□□ -1.04
ZNF540-210ENST00000592533 VPREB3Q9UKI3 123 aa8.53□□□□□ -1.04
ZNF540-210ENST00000592533 TRAV2A0A0B4J234 112 aa8.53□□□□□ -1.04
ZNF540-210ENST00000592533 IGKV3-20P01619 116 aa8.53□□□□□ -1.04
ZNF540-210ENST00000592533 HOXD3P31249 432 aaPredicted RBP8.53□□□□□ -1.04
ZNF540-210ENST00000592533 Q5PR19 223 aa8.52□□□□□ -1.05
ZNF540-210ENST00000592533 MTURNQ8N3F0 131 aa8.52□□□□□ -1.05
ZNF540-210ENST00000592533 ZNF702PQ9H963 129 aa8.52□□□□□ -1.05
ZNF540-210ENST00000592533 PRO1854Q9UHT4 67 aa8.52□□□□□ -1.05
ZNF540-210ENST00000592533 M0QXV9 152 aa8.52□□□□□ -1.05
ZNF540-210ENST00000592533 DEFB104AQ8WTQ1 72 aa8.52□□□□□ -1.05
ZNF540-210ENST00000592533 FAM104AQ969W3 186 aa8.52□□□□□ -1.05
ZNF540-210ENST00000592533 OPRPNQ99935 248 aaPredicted RBP8.52□□□□□ -1.05
ZNF540-210ENST00000592533 PKD1L2Q7Z442 2459 aa8.52□□□□□ -1.05
ZNF540-210ENST00000592533 CELSR2Q9HCU4 2923 aa8.52□□□□□ -1.05
ZNF540-210ENST00000592533 A0A0B4J2C4 111 aa8.51□□□□□ -1.05
ZNF540-210ENST00000592533 RBMY1A1P0DJD3 496 aaKnown RBP8.51□□□□□ -1.05
ZNF540-210ENST00000592533 RBMY1CP0DJD4 496 aa8.51□□□□□ -1.05
ZNF540-210ENST00000592533 PSMB2P49721 201 aa8.51□□□□□ -1.05
ZNF540-210ENST00000592533 INSL3P51460 131 aa8.51□□□□□ -1.05
ZNF540-210ENST00000592533 RBMY1FQ15415 496 aaKnown RBP8.51□□□□□ -1.05
ZNF540-210ENST00000592533 GTSF1LQ9H1H1 148 aa8.51□□□□□ -1.05
ZNF540-210ENST00000592533 CSPG4Q6UVK1 2322 aa8.51□□□□□ -1.05
ZNF540-210ENST00000592533 LOC107984156A0A0G2JMH3 177 aa8.51□□□□□ -1.05
ZNF540-210ENST00000592533 Q6YL49 198 aa8.51□□□□□ -1.05
ZNF540-210ENST00000592533 ARL17AQ8IVW1 177 aa8.51□□□□□ -1.05
ZNF540-210ENST00000592533 CFAP46Q8IYW2 2715 aa8.51□□□□□ -1.05
ZNF540-210ENST00000592533 TCL1BO95988 128 aa8.51□□□□□ -1.05
ZNF540-210ENST00000592533 MRPS36P82909 103 aaKnown RBP8.51□□□□□ -1.05
ZNF540-210ENST00000592533 LINC00467Q9BRT7 94 aa8.5□□□□□ -1.05
ZNF540-210ENST00000592533 VCX2Q9H322 139 aa8.5□□□□□ -1.05
ZNF540-210ENST00000592533 M0R2P5 195 aa8.5□□□□□ -1.05
ZNF540-210ENST00000592533 EIF4EBP3O60516 100 aaPredicted RBP8.5□□□□□ -1.05
ZNF540-210ENST00000592533 TMEM263Q8WUH6 116 aaKnown RBP8.5□□□□□ -1.05
ZNF540-210ENST00000592533 TEN1Q86WV5 123 aa8.49□□□□□ -1.05
ZNF540-210ENST00000592533 CR1P17927 2039 aa8.49□□□□□ -1.05
ZNF540-210ENST00000592533 A8MWV9 139 aa8.49□□□□□ -1.05
ZNF540-210ENST00000592533 A0A0J9YXV3 536 aa8.49□□□□□ -1.05
ZNF540-210ENST00000592533 TCTEX1D4Q5JR98 221 aa8.49□□□□□ -1.05
ZNF540-210ENST00000592533 Q8N2B8 174 aa8.49□□□□□ -1.05
ZNF540-210ENST00000592533 PPDPFLQ8WWR9 84 aa8.49□□□□□ -1.05
ZNF540-210ENST00000592533 A4D1N5 150 aa8.48□□□□□ -1.05
ZNF540-210ENST00000592533 H3BMM0 161 aa8.48□□□□□ -1.05
ZNF540-210ENST00000592533 IGHV3-33P01772 117 aa8.48□□□□□ -1.05
ZNF540-210ENST00000592533 LINC01600Q96MT4 127 aa8.48□□□□□ -1.05
ZNF540-210ENST00000592533 SMAGPQ0VAQ4 97 aa8.48□□□□□ -1.05
ZNF540-210ENST00000592533 SPG11Q96JI7 2443 aa8.48□□□□□ -1.05
ZNF540-210ENST00000592533 USP9XQ93008 2570 aaPredicted RBP8.47□□□□□ -1.05
ZNF540-210ENST00000592533 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.47□□□□□ -1.05
ZNF540-210ENST00000592533 CDIP1Q9H305 208 aa8.47□□□□□ -1.05
ZNF540-210ENST00000592533 COL12A1Q99715 3063 aa8.47□□□□□ -1.05
ZNF540-210ENST00000592533 FLNCQ14315 2725 aa8.47□□□□□ -1.05
ZNF540-210ENST00000592533 A0A0J9YXY3 114 aa8.47□□□□□ -1.05
ZNF540-210ENST00000592533 RBMY1BA6NDE4 496 aaKnown RBP8.47□□□□□ -1.05
ZNF540-210ENST00000592533 RBMY1EA6NEQ0 496 aaKnown RBP8.47□□□□□ -1.05
ZNF540-210ENST00000592533 RBMY1DP0C7P1 496 aaKnown RBP8.47□□□□□ -1.05
ZNF540-210ENST00000592533 LITAFQ99732 161 aa8.47□□□□□ -1.05
ZNF540-210ENST00000592533 SPANXA1Q9NS26 97 aa8.47□□□□□ -1.05
ZNF540-210ENST00000592533 PRRC2AP48634 2157 aaKnown RBP8.47□□□□□ -1.05
ZNF540-210ENST00000592533 IGHV3-30-3P0DP02 117 aa8.47□□□□□ -1.05
ZNF540-210ENST00000592533 NRGNQ92686 78 aa8.47□□□□□ -1.05
ZNF540-210ENST00000592533 CARD19Q96LW7 228 aa8.47□□□□□ -1.05
ZNF540-210ENST00000592533 KNCNA6PVL3 124 aa8.46□□□□□ -1.05
ZNF540-210ENST00000592533 TGFAP01135 160 aa8.46□□□□□ -1.05
ZNF540-210ENST00000592533 CD28P10747 220 aa8.46□□□□□ -1.05
ZNF540-210ENST00000592533 ZNF415Q09FC8 603 aa8.46□□□□□ -1.05
ZNF540-210ENST00000592533 MUSTN1Q8IVN3 82 aa8.46□□□□□ -1.05
ZNF540-210ENST00000592533 DUX5Q96PT3 197 aa8.46□□□□□ -1.05
ZNF540-210ENST00000592533 CRYBG3Q68DQ2 2970 aa8.46□□□□□ -1.05
ZNF540-210ENST00000592533 TINCRA0A1B0GVN0 87 aa8.46□□□□□ -1.06
ZNF540-210ENST00000592533 SFTA2Q6UW10 78 aa8.46□□□□□ -1.06
ZNF540-210ENST00000592533 ZNF418Q8TF45 676 aaPredicted RBP8.46□□□□□ -1.06
ZNF540-210ENST00000592533 CHCHD7Q9BUK0 85 aa8.46□□□□□ -1.06
ZNF540-210ENST00000592533 TIMM21Q9BVV7 248 aa8.46□□□□□ -1.06
ZNF540-210ENST00000592533 SORL1Q92673 2214 aa8.45□□□□□ -1.06
ZNF540-210ENST00000592533 DEFB131AP59861 70 aa8.45□□□□□ -1.06
ZNF540-210ENST00000592533 DNAJC30Q96LL9 226 aa8.45□□□□□ -1.06
ZNF540-210ENST00000592533 SPANXDQ9BXN6 97 aa8.45□□□□□ -1.06
ZNF540-210ENST00000592533 SPANXCQ9NY87 97 aa8.45□□□□□ -1.06
ZNF540-210ENST00000592533 TNFRSF18Q9Y5U5 241 aa8.45□□□□□ -1.06
ZNF540-210ENST00000592533 ANKRD17O75179 2603 aaKnown RBP8.45□□□□□ -1.06
ZNF540-210ENST00000592533 IGHV1-58A0A0C4DH39 117 aa8.45□□□□□ -1.06
ZNF540-210ENST00000592533 BEAN1Q3B7T3 259 aa8.45□□□□□ -1.06
ZNF540-210ENST00000592533 C11orf72Q8NBR9 251 aa8.45□□□□□ -1.06
ZNF540-210ENST00000592533 RNF183Q96D59 192 aa8.45□□□□□ -1.06
ZNF540-210ENST00000592533 CLUHP3Q96NS8 147 aa8.45□□□□□ -1.06
ZNF540-210ENST00000592533 ERG28Q9UKR5 140 aa8.45□□□□□ -1.06
ZNF540-210ENST00000592533 UBE2D4Q9Y2X8 147 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms