RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 DUX3Q96PT4 197 aa7.32□□□□□ -1.24
VPS25-202ENST00000589219 SCGB3A1Q96QR1 104 aa7.32□□□□□ -1.24
VPS25-202ENST00000589219 KIR2DL4Q99706 377 aa7.32□□□□□ -1.24
VPS25-202ENST00000589219 MDFICQ9P1T7 246 aa7.32□□□□□ -1.24
VPS25-202ENST00000589219 CYSLTR1Q9Y271 337 aa7.32□□□□□ -1.24
VPS25-202ENST00000589219 WNK1Q9H4A3 2382 aa7.31□□□□□ -1.24
VPS25-202ENST00000589219 RBMY1BA6NDE4 496 aaKnown RBP7.31□□□□□ -1.24
VPS25-202ENST00000589219 RBMY1EA6NEQ0 496 aaKnown RBP7.31□□□□□ -1.24
VPS25-202ENST00000589219 F5H697 171 aa7.31□□□□□ -1.24
VPS25-202ENST00000589219 F8VRH5 84 aa7.31□□□□□ -1.24
VPS25-202ENST00000589219 CCL24O00175 119 aa7.31□□□□□ -1.24
VPS25-202ENST00000589219 TGP01266 2768 aa7.31□□□□□ -1.24
VPS25-202ENST00000589219 RBMY1DP0C7P1 496 aaKnown RBP7.31□□□□□ -1.24
VPS25-202ENST00000589219 POLR2KP53803 58 aaKnown RBP7.31□□□□□ -1.24
VPS25-202ENST00000589219 CMC4P56277 68 aaPredicted RBP7.31□□□□□ -1.24
VPS25-202ENST00000589219 SEC11AP67812 179 aa7.31□□□□□ -1.24
VPS25-202ENST00000589219 HSD52Q0P140 79 aa7.31□□□□□ -1.24
VPS25-202ENST00000589219 RHOHQ15669 191 aa7.31□□□□□ -1.24
VPS25-202ENST00000589219 CD300EQ496F6 205 aaPredicted RBP7.31□□□□□ -1.24
VPS25-202ENST00000589219 TMEM97Q5BJF2 176 aa7.31□□□□□ -1.24
VPS25-202ENST00000589219 ORAOV1Q8WV07 137 aa7.31□□□□□ -1.24
VPS25-202ENST00000589219 A0A087WWL8 130 aa7.3□□□□□ -1.24
VPS25-202ENST00000589219 TRBV27A0A0K0K1C4 114 aa7.3□□□□□ -1.24
VPS25-202ENST00000589219 CRYGDP07320 174 aa7.3□□□□□ -1.24
VPS25-202ENST00000589219 RBMY1A1P0DJD3 496 aaKnown RBP7.3□□□□□ -1.24
VPS25-202ENST00000589219 RBMY1CP0DJD4 496 aa7.3□□□□□ -1.24
VPS25-202ENST00000589219 CD28P10747 220 aa7.3□□□□□ -1.24
VPS25-202ENST00000589219 ZNF25P17030 456 aaPredicted RBP7.3□□□□□ -1.24
VPS25-202ENST00000589219 NMUP48645 174 aa7.3□□□□□ -1.24
VPS25-202ENST00000589219 RBMY1FQ15415 496 aaKnown RBP7.3□□□□□ -1.24
VPS25-202ENST00000589219 NSUN5P1Q3KNT7 163 aa7.3□□□□□ -1.24
VPS25-202ENST00000589219 MPV17L2Q567V2 206 aa7.3□□□□□ -1.24
VPS25-202ENST00000589219 FAM74A4Q5TZK3 123 aa7.3□□□□□ -1.24
VPS25-202ENST00000589219 ERASQ7Z444 233 aa7.3□□□□□ -1.24
VPS25-202ENST00000589219 TMEM141Q96I45 108 aa7.3□□□□□ -1.24
VPS25-202ENST00000589219 TIMM17AQ99595 171 aa7.3□□□□□ -1.24
VPS25-202ENST00000589219 JPT2Q9H910 190 aa7.3□□□□□ -1.24
VPS25-202ENST00000589219 MRPL35Q9NZE8 188 aaKnown RBP7.3□□□□□ -1.24
VPS25-202ENST00000589219 HIGD1BQ9P298 99 aa7.3□□□□□ -1.24
VPS25-202ENST00000589219 TP73-AS1Q9UF72 201 aa7.3□□□□□ -1.24
VPS25-202ENST00000589219 SDHAF1A6NFY7 115 aa7.29□□□□□ -1.24
VPS25-202ENST00000589219 A8MWV9 139 aa7.29□□□□□ -1.24
VPS25-202ENST00000589219 M0QY20 66 aa7.29□□□□□ -1.24
VPS25-202ENST00000589219 M0R2P5 195 aa7.29□□□□□ -1.24
VPS25-202ENST00000589219 RHODO00212 210 aa7.29□□□□□ -1.24
VPS25-202ENST00000589219 KRTAP10-3P60369 221 aa7.29□□□□□ -1.24
VPS25-202ENST00000589219 ZNF876PQ49A33 203 aa7.29□□□□□ -1.24
VPS25-202ENST00000589219 ZC2HC1BQ5TFG8 222 aa7.29□□□□□ -1.24
VPS25-202ENST00000589219 ZFP2Q6ZN57 461 aa7.29□□□□□ -1.24
VPS25-202ENST00000589219 NEXN-AS1Q8NBZ9 246 aa7.29□□□□□ -1.24
VPS25-202ENST00000589219 CITED2Q99967 270 aaPredicted RBP7.29□□□□□ -1.24
VPS25-202ENST00000589219 SPXQ9BT56 116 aa7.29□□□□□ -1.24
VPS25-202ENST00000589219 TMEM208Q9BTX3 173 aa7.29□□□□□ -1.24
VPS25-202ENST00000589219 HHLA3Q9XRX5 114 aa7.29□□□□□ -1.24
VPS25-202ENST00000589219 CHTOPQ9Y3Y2 248 aaKnown RBP7.29□□□□□ -1.24
VPS25-202ENST00000589219 COX11Q9Y6N1 276 aa7.29□□□□□ -1.24
VPS25-202ENST00000589219 NOTCH1P46531 2555 aa7.28□□□□□ -1.24
VPS25-202ENST00000589219 A0A1W2PRX2 142 aa7.28□□□□□ -1.24
VPS25-202ENST00000589219 OR11H12B2RN74 326 aa7.28□□□□□ -1.24
VPS25-202ENST00000589219 ODF3L2Q3SX64 289 aa7.28□□□□□ -1.24
VPS25-202ENST00000589219 PAPPA-AS1Q5QFB9 102 aa7.28□□□□□ -1.24
VPS25-202ENST00000589219 STHQ8IWL8 128 aa7.28□□□□□ -1.24
VPS25-202ENST00000589219 BAALCQ8WXS3 180 aa7.28□□□□□ -1.24
VPS25-202ENST00000589219 TP53TG1Q9Y2A0 90 aa7.28□□□□□ -1.24
VPS25-202ENST00000589219 LCE2CQ5TA81 110 aa7.27□□□□□ -1.25
VPS25-202ENST00000589219 MORN3Q6PF18 240 aaPredicted RBP7.27□□□□□ -1.25
VPS25-202ENST00000589219 FAM110AQ9BQ89 295 aa7.27□□□□□ -1.25
VPS25-202ENST00000589219 A6NDN8 102 aa7.26□□□□□ -1.25
VPS25-202ENST00000589219 ZNF124Q15973 351 aa7.26□□□□□ -1.25
VPS25-202ENST00000589219 NEGR1Q7Z3B1 354 aa7.26□□□□□ -1.25
VPS25-202ENST00000589219 GTSCR1Q86UQ5 136 aa7.26□□□□□ -1.25
VPS25-202ENST00000589219 PCP2Q8IVA1 136 aa7.26□□□□□ -1.25
VPS25-202ENST00000589219 LINC01587Q99440 93 aa7.26□□□□□ -1.25
VPS25-202ENST00000589219 IGKV2D-26A0A0A0MRZ7 120 aa7.25□□□□□ -1.25
VPS25-202ENST00000589219 IGIPA6NJ69 53 aa7.25□□□□□ -1.25
VPS25-202ENST00000589219 I3L3M4 83 aa7.25□□□□□ -1.25
VPS25-202ENST00000589219 TAX1BP3O14907 124 aa7.25□□□□□ -1.25
VPS25-202ENST00000589219 HERVK_113P61574 105 aa7.25□□□□□ -1.25
VPS25-202ENST00000589219 PMVKQ15126 192 aa7.25□□□□□ -1.25
VPS25-202ENST00000589219 BEAN1Q3B7T3 259 aa7.25□□□□□ -1.25
VPS25-202ENST00000589219 UFSP1Q6NVU6 142 aa7.25□□□□□ -1.25
VPS25-202ENST00000589219 C11orf44Q8N8P7 122 aa7.25□□□□□ -1.25
VPS25-202ENST00000589219 C11orf72Q8NBR9 251 aa7.25□□□□□ -1.25
VPS25-202ENST00000589219 OR11H2Q8NH07 326 aa7.25□□□□□ -1.25
VPS25-202ENST00000589219 PRSS29PA6NIE9 313 aa7.24□□□□□ -1.25
VPS25-202ENST00000589219 E9PLD3 99 aa7.24□□□□□ -1.25
VPS25-202ENST00000589219 SAP30O75446 220 aa7.24□□□□□ -1.25
VPS25-202ENST00000589219 TSHBP01222 138 aa7.24□□□□□ -1.25
VPS25-202ENST00000589219 NPSP0C0P6 89 aa7.24□□□□□ -1.25
VPS25-202ENST00000589219 TAL2Q16559 108 aa7.24□□□□□ -1.25
VPS25-202ENST00000589219 IL17DQ8TAD2 202 aa7.24□□□□□ -1.25
VPS25-202ENST00000589219 DNAJC30Q96LL9 226 aa7.24□□□□□ -1.25
VPS25-202ENST00000589219 CHAC1Q9BUX1 264 aa7.24□□□□□ -1.25
VPS25-202ENST00000589219 MUC4Q99102 2169 aa7.24□□□□□ -1.25
VPS25-202ENST00000589219 RS1O15537 224 aa7.23□□□□□ -1.25
VPS25-202ENST00000589219 IGLV1-51P01701 117 aa7.23□□□□□ -1.25
VPS25-202ENST00000589219 TCTAP57738 103 aa7.23□□□□□ -1.25
VPS25-202ENST00000589219 NDUFA11Q86Y39 141 aa7.23□□□□□ -1.25
VPS25-202ENST00000589219 C20orf203Q8NBC4 194 aa7.23□□□□□ -1.25
VPS25-202ENST00000589219 CMYA5Q8N3K9 4069 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms