RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 SAMD10Q9BYL1 202 aa9.02□□□□□ -0.97
VMP1-202ENST00000585847 C11orf68Q9H3H3 251 aaKnown RBP9.02□□□□□ -0.97
VMP1-202ENST00000585847 TRGV2A0A075B6R0 118 aa9.01□□□□□ -0.97
VMP1-202ENST00000585847 IGHV4-28A0A0C4DH34 117 aa9.01□□□□□ -0.97
VMP1-202ENST00000585847 ORMDL2Q53FV1 153 aa9.01□□□□□ -0.97
VMP1-202ENST00000585847 CASC10Q5T4H9 136 aa9.01□□□□□ -0.97
VMP1-202ENST00000585847 FAM74A4Q5TZK3 123 aa9.01□□□□□ -0.97
VMP1-202ENST00000585847 SUMO4Q6EEV6 95 aa9.01□□□□□ -0.97
VMP1-202ENST00000585847 Q8N8P6 123 aa9.01□□□□□ -0.97
VMP1-202ENST00000585847 SMIM2Q9BVW6 85 aa9.01□□□□□ -0.97
VMP1-202ENST00000585847 ST20Q9HBF5 79 aa9.01□□□□□ -0.97
VMP1-202ENST00000585847 NOP10Q9NPE3 64 aaKnown RBP9.01□□□□□ -0.97
VMP1-202ENST00000585847 NIT2Q9NQR4 276 aa9.01□□□□□ -0.97
VMP1-202ENST00000585847 A0A087WWL8 130 aa9□□□□□ -0.97
VMP1-202ENST00000585847 A0A0J9YWU9 116 aa9□□□□□ -0.97
VMP1-202ENST00000585847 M0QY20 66 aa9□□□□□ -0.97
VMP1-202ENST00000585847 VCYO14598 125 aa9□□□□□ -0.97
VMP1-202ENST00000585847 DEFB4AO15263 64 aa9□□□□□ -0.97
VMP1-202ENST00000585847 NPYP01303 97 aa9□□□□□ -0.97
VMP1-202ENST00000585847 RNASEKQ6P5S7 137 aaKnown RBP9□□□□□ -0.97
VMP1-202ENST00000585847 KIR2DL4Q99706 377 aa9□□□□□ -0.97
VMP1-202ENST00000585847 HIST1H2BLQ99880 126 aa9□□□□□ -0.97
VMP1-202ENST00000585847 MRPL16Q9NX20 251 aaKnown RBP9□□□□□ -0.97
VMP1-202ENST00000585847 DNAH7Q8WXX0 4024 aa9□□□□□ -0.97
VMP1-202ENST00000585847 TRBV27A0A0K0K1C4 114 aa8.99□□□□□ -0.97
VMP1-202ENST00000585847 LOC105371267A0A1B0GV96 52 aa8.99□□□□□ -0.97
VMP1-202ENST00000585847 TRBV6-4A0A1B0GX49 114 aa8.99□□□□□ -0.97
VMP1-202ENST00000585847 NCR2O95944 276 aa8.99□□□□□ -0.97
VMP1-202ENST00000585847 SPART-AS1P0CW21 52 aa8.99□□□□□ -0.97
VMP1-202ENST00000585847 AMTP48728 403 aa8.99□□□□□ -0.97
VMP1-202ENST00000585847 NIT1Q86X76 327 aa8.99□□□□□ -0.97
VMP1-202ENST00000585847 HSPB8Q9UJY1 196 aa8.99□□□□□ -0.97
VMP1-202ENST00000585847 RYR2Q92736 4967 aa8.99□□□□□ -0.97
VMP1-202ENST00000585847 RHOHQ15669 191 aa8.98□□□□□ -0.97
VMP1-202ENST00000585847 Q6ZTI0 123 aa8.98□□□□□ -0.97
VMP1-202ENST00000585847 HBDP02042 147 aa8.97□□□□□ -0.97
VMP1-202ENST00000585847 SMIM6P0DI80 62 aa8.97□□□□□ -0.97
VMP1-202ENST00000585847 LINC00310P59036 64 aa8.97□□□□□ -0.97
VMP1-202ENST00000585847 IQCJQ1A5X6 159 aa8.97□□□□□ -0.97
VMP1-202ENST00000585847 TMEM97Q5BJF2 176 aa8.97□□□□□ -0.97
VMP1-202ENST00000585847 TMEM70Q9BUB7 260 aa8.97□□□□□ -0.97
VMP1-202ENST00000585847 CELA1Q9UNI1 258 aa8.97□□□□□ -0.97
VMP1-202ENST00000585847 TNFRSF18Q9Y5U5 241 aa8.97□□□□□ -0.97
VMP1-202ENST00000585847 TRAV26-2A0A0B4J265 109 aa8.96□□□□□ -0.98
VMP1-202ENST00000585847 SDHAF1A6NFY7 115 aa8.96□□□□□ -0.98
VMP1-202ENST00000585847 SMKR1H3BMG3 65 aa8.96□□□□□ -0.98
VMP1-202ENST00000585847 K7EQD1 137 aa8.96□□□□□ -0.98
VMP1-202ENST00000585847 IFI27P40305 119 aaPredicted RBP8.96□□□□□ -0.98
VMP1-202ENST00000585847 POLR2KP53803 58 aaKnown RBP8.96□□□□□ -0.98
VMP1-202ENST00000585847 RPL36AP83881 106 aaKnown RBP8.96□□□□□ -0.98
VMP1-202ENST00000585847 SMAGPQ0VAQ4 97 aa8.96□□□□□ -0.98
VMP1-202ENST00000585847 LAGE3Q14657 143 aa8.96□□□□□ -0.98
VMP1-202ENST00000585847 RPL36ALQ969Q0 106 aaKnown RBP8.96□□□□□ -0.98
VMP1-202ENST00000585847 PRADC1Q9BSG0 188 aa8.96□□□□□ -0.98
VMP1-202ENST00000585847 JPT2Q9H910 190 aa8.96□□□□□ -0.98
VMP1-202ENST00000585847 DKK2Q9UBU2 259 aa8.96□□□□□ -0.98
VMP1-202ENST00000585847 TENM2Q9NT68 2774 aa8.96□□□□□ -0.98
VMP1-202ENST00000585847 EPPK1P58107 5090 aaKnown RBP8.95□□□□□ -0.98
VMP1-202ENST00000585847 IGLV2-18A0A075B6J9 118 aa8.95□□□□□ -0.98
VMP1-202ENST00000585847 GAGE12BA1L429 117 aa8.95□□□□□ -0.98
VMP1-202ENST00000585847 I3L3M4 83 aa8.95□□□□□ -0.98
VMP1-202ENST00000585847 GAGE7O76087 117 aa8.95□□□□□ -0.98
VMP1-202ENST00000585847 NPSP0C0P6 89 aa8.95□□□□□ -0.98
VMP1-202ENST00000585847 GAGE12FP0CL80 117 aa8.95□□□□□ -0.98
VMP1-202ENST00000585847 GAGE12GP0CL81 117 aa8.95□□□□□ -0.98
VMP1-202ENST00000585847 GAGE12IP0CL82 117 aa8.95□□□□□ -0.98
VMP1-202ENST00000585847 FABP4P15090 132 aa8.95□□□□□ -0.98
VMP1-202ENST00000585847 GATA1P15976 413 aaPredicted RBP8.95□□□□□ -0.98
VMP1-202ENST00000585847 FCER1GP30273 86 aa8.95□□□□□ -0.98
VMP1-202ENST00000585847 DAZ4Q86SG3 579 aaKnown RBP8.95□□□□□ -0.98
VMP1-202ENST00000585847 DAZ3Q9NR90 486 aaKnown RBP8.95□□□□□ -0.98
VMP1-202ENST00000585847 IGHV1-24A0A0C4DH33 117 aa8.94□□□□□ -0.98
VMP1-202ENST00000585847 LCE6AA0A183 80 aa8.94□□□□□ -0.98
VMP1-202ENST00000585847 LEPROTL1O95214 131 aa8.94□□□□□ -0.98
VMP1-202ENST00000585847 ATP5G1P05496 136 aa8.94□□□□□ -0.98
VMP1-202ENST00000585847 DAD1P61803 113 aa8.94□□□□□ -0.98
VMP1-202ENST00000585847 FAM222AQ5U5X8 452 aa8.94□□□□□ -0.98
VMP1-202ENST00000585847 SH2D6Q7Z4S9 175 aa8.94□□□□□ -0.98
VMP1-202ENST00000585847 URB1-AS1Q96HZ7 61 aa8.94□□□□□ -0.98
VMP1-202ENST00000585847 MUC4Q99102 2169 aa8.94□□□□□ -0.98
VMP1-202ENST00000585847 TRBV7-3A0A075B6L6 115 aa8.93□□□□□ -0.98
VMP1-202ENST00000585847 TRGV4A0A0C4DH28 118 aa8.93□□□□□ -0.98
VMP1-202ENST00000585847 LOC389332A0A1B0GUA5 103 aa8.93□□□□□ -0.98
VMP1-202ENST00000585847 C20orf202A1L168 122 aa8.93□□□□□ -0.98
VMP1-202ENST00000585847 ATP5LO75964 103 aa8.93□□□□□ -0.98
VMP1-202ENST00000585847 PDZD11Q5EBL8 140 aa8.93□□□□□ -0.98
VMP1-202ENST00000585847 RPL39LQ96EH5 51 aaKnown RBP8.93□□□□□ -0.98
VMP1-202ENST00000585847 PRO0255Q9UI72 69 aa8.93□□□□□ -0.98
VMP1-202ENST00000585847 DYNC2H1Q8NCM8 4307 aaKnown RBP8.92□□□□□ -0.98
VMP1-202ENST00000585847 IFITM10A6NMD0 228 aa8.92□□□□□ -0.98
VMP1-202ENST00000585847 EMP1P54849 157 aa8.92□□□□□ -0.98
VMP1-202ENST00000585847 PAPPA-AS1Q5QFB9 102 aa8.92□□□□□ -0.98
VMP1-202ENST00000585847 ZFAND6Q6FIF0 208 aa8.92□□□□□ -0.98
VMP1-202ENST00000585847 SPATA12Q7Z6I5 190 aa8.92□□□□□ -0.98
VMP1-202ENST00000585847 OR10D4PQ8NGN7 298 aa8.92□□□□□ -0.98
VMP1-202ENST00000585847 ZNF479Q96JC4 524 aa8.92□□□□□ -0.98
VMP1-202ENST00000585847 CYSLTR1Q9Y271 337 aa8.92□□□□□ -0.98
VMP1-202ENST00000585847 BIRC6Q9NR09 4857 aa8.91□□□□□ -0.98
VMP1-202ENST00000585847 TRAV26-1A0A087WT03 109 aa8.91□□□□□ -0.98
VMP1-202ENST00000585847 H3BNG1 76 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms