RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 LINC00299Q6ZSB3 139 aa4.16□□□□□ -1.74
NUP88-212ENST00000576708 OR10G9Q8NGN4 311 aa4.16□□□□□ -1.74
NUP88-212ENST00000576708 OR10G7Q8NGN6 311 aa4.16□□□□□ -1.74
NUP88-212ENST00000576708 STOML3Q8TAV4 291 aa4.16□□□□□ -1.74
NUP88-212ENST00000576708 TXNDC17Q9BRA2 123 aa4.16□□□□□ -1.74
NUP88-212ENST00000576708 Q9HAA7 133 aa4.16□□□□□ -1.74
NUP88-212ENST00000576708 ALG5Q9Y673 324 aa4.16□□□□□ -1.74
NUP88-212ENST00000576708 MYCBP2O75592 4640 aa4.15□□□□□ -1.74
NUP88-212ENST00000576708 IGHV3-38A0A0C4DH36 116 aa4.15□□□□□ -1.75
NUP88-212ENST00000576708 ARL14EPLP0DKL9 152 aa4.15□□□□□ -1.75
NUP88-212ENST00000576708 ZNF876PQ49A33 203 aa4.15□□□□□ -1.75
NUP88-212ENST00000576708 FAM74A1Q5RGS3 127 aa4.15□□□□□ -1.75
NUP88-212ENST00000576708 CFAP126Q5VTH2 177 aa4.15□□□□□ -1.75
NUP88-212ENST00000576708 PQLC2Q6ZP29 291 aa4.15□□□□□ -1.75
NUP88-212ENST00000576708 SLC25A29Q8N8R3 303 aa4.15□□□□□ -1.75
NUP88-212ENST00000576708 ASB13Q8WXK3 278 aa4.15□□□□□ -1.75
NUP88-212ENST00000576708 ISOC2Q96AB3 205 aa4.15□□□□□ -1.75
NUP88-212ENST00000576708 SMIM12Q96EX1 92 aa4.15□□□□□ -1.75
NUP88-212ENST00000576708 SDF2L1Q9HCN8 221 aa4.15□□□□□ -1.75
NUP88-212ENST00000576708 PSCAO43653 123 aa4.14□□□□□ -1.75
NUP88-212ENST00000576708 GCGP01275 180 aa4.14□□□□□ -1.75
NUP88-212ENST00000576708 IGLV2-11P01706 119 aa4.14□□□□□ -1.75
NUP88-212ENST00000576708 TCRAP04437 139 aa4.14□□□□□ -1.75
NUP88-212ENST00000576708 S100A8P05109 93 aa4.14□□□□□ -1.75
NUP88-212ENST00000576708 GCHFRP30047 84 aa4.14□□□□□ -1.75
NUP88-212ENST00000576708 WFDC2Q14508 124 aa4.14□□□□□ -1.75
NUP88-212ENST00000576708 Q5BKY6 102 aa4.14□□□□□ -1.75
NUP88-212ENST00000576708 OR10J3Q5JRS4 329 aa4.14□□□□□ -1.75
NUP88-212ENST00000576708 ZNF506Q5JVG8 444 aa4.14□□□□□ -1.75
NUP88-212ENST00000576708 PRNTQ86SH4 94 aa4.14□□□□□ -1.75
NUP88-212ENST00000576708 FRZBQ92765 325 aa4.14□□□□□ -1.75
NUP88-212ENST00000576708 SFRP2Q96HF1 295 aa4.14□□□□□ -1.75
NUP88-212ENST00000576708 C14orf144Q96I85 54 aa4.14□□□□□ -1.75
NUP88-212ENST00000576708 KCNS1Q96KK3 526 aa4.14□□□□□ -1.75
NUP88-212ENST00000576708 LINC00479Q96M42 142 aa4.14□□□□□ -1.75
NUP88-212ENST00000576708 SH3BGRL3Q9H299 93 aa4.14□□□□□ -1.75
NUP88-212ENST00000576708 Q9UF83 564 aa4.14□□□□□ -1.75
NUP88-212ENST00000576708 PSG8Q9UQ74 426 aa4.14□□□□□ -1.75
NUP88-212ENST00000576708 V9GYY9 64 aa4.14□□□□□ -1.75
NUP88-212ENST00000576708 TRAV8-6A0A0B4J262 113 aa4.13□□□□□ -1.75
NUP88-212ENST00000576708 IBA57-AS1B1ANH7 110 aa4.13□□□□□ -1.75
NUP88-212ENST00000576708 GGTLC3B5MD39 225 aa4.13□□□□□ -1.75
NUP88-212ENST00000576708 VCYO14598 125 aa4.13□□□□□ -1.75
NUP88-212ENST00000576708 TAAR5O14804 337 aa4.13□□□□□ -1.75
NUP88-212ENST00000576708 LECT2O14960 151 aa4.13□□□□□ -1.75
NUP88-212ENST00000576708 PFN1P07737 140 aaKnown RBP4.13□□□□□ -1.75
NUP88-212ENST00000576708 RNASE3P12724 160 aaKnown RBP4.13□□□□□ -1.75
NUP88-212ENST00000576708 ATP6V0CP27449 155 aa4.13□□□□□ -1.75
NUP88-212ENST00000576708 RPL32P62910 135 aaKnown RBP4.13□□□□□ -1.75
NUP88-212ENST00000576708 IFITM2Q01629 132 aa4.13□□□□□ -1.75
NUP88-212ENST00000576708 LINC01556Q5JQF7 62 aa4.13□□□□□ -1.75
NUP88-212ENST00000576708 C10orf126Q8N4M7 172 aa4.13□□□□□ -1.75
NUP88-212ENST00000576708 Q8N814 137 aa4.13□□□□□ -1.75
NUP88-212ENST00000576708 BAALCQ8WXS3 180 aa4.13□□□□□ -1.75
NUP88-212ENST00000576708 DNAJC30Q96LL9 226 aa4.13□□□□□ -1.75
NUP88-212ENST00000576708 C9orf85Q96MD7 179 aa4.13□□□□□ -1.75
NUP88-212ENST00000576708 TCEAL7Q9BRU2 100 aa4.13□□□□□ -1.75
NUP88-212ENST00000576708 JPT2Q9H910 190 aa4.13□□□□□ -1.75
NUP88-212ENST00000576708 EPDR1Q9UM22 224 aa4.13□□□□□ -1.75
NUP88-212ENST00000576708 IGKV3D-20A0A0C4DH25 116 aa4.12□□□□□ -1.75
NUP88-212ENST00000576708 TRBV6-4A0A1B0GX49 114 aa4.12□□□□□ -1.75
NUP88-212ENST00000576708 TSTD3H0UI37 97 aa4.12□□□□□ -1.75
NUP88-212ENST00000576708 K7EN84 100 aa4.12□□□□□ -1.75
NUP88-212ENST00000576708 DEFA1P59665 94 aa4.12□□□□□ -1.75
NUP88-212ENST00000576708 DEFA3P59666 94 aa4.12□□□□□ -1.75
NUP88-212ENST00000576708 GAGE4Q13068 117 aa4.12□□□□□ -1.75
NUP88-212ENST00000576708 GAGE5Q13069 117 aa4.12□□□□□ -1.75
NUP88-212ENST00000576708 RHOHQ15669 191 aa4.12□□□□□ -1.75
NUP88-212ENST00000576708 PDZD11Q5EBL8 140 aa4.12□□□□□ -1.75
NUP88-212ENST00000576708 LCE1AQ5T7P2 110 aa4.12□□□□□ -1.75
NUP88-212ENST00000576708 LELP1Q5T871 98 aa4.12□□□□□ -1.75
NUP88-212ENST00000576708 SH2D6Q7Z4S9 175 aa4.12□□□□□ -1.75
NUP88-212ENST00000576708 C14orf178Q8N769 122 aaPredicted RBP4.12□□□□□ -1.75
NUP88-212ENST00000576708 C5orf17Q8NAS9 161 aa4.12□□□□□ -1.75
NUP88-212ENST00000576708 OR2T35Q8NGX2 323 aa4.12□□□□□ -1.75
NUP88-212ENST00000576708 OR2G3Q8NGZ4 309 aa4.12□□□□□ -1.75
NUP88-212ENST00000576708 ATP6V0E2Q8NHE4 81 aa4.12□□□□□ -1.75
NUP88-212ENST00000576708 PRADC1Q9BSG0 188 aa4.12□□□□□ -1.75
NUP88-212ENST00000576708 NDFIP1Q9BT67 221 aa4.12□□□□□ -1.75
NUP88-212ENST00000576708 SAMD10Q9BYL1 202 aa4.12□□□□□ -1.75
NUP88-212ENST00000576708 GTSF1LQ9H1H1 148 aa4.12□□□□□ -1.75
NUP88-212ENST00000576708 GRIFINA4D1Z8 144 aa4.11□□□□□ -1.75
NUP88-212ENST00000576708 CXorf1O96002 111 aa4.11□□□□□ -1.75
NUP88-212ENST00000576708 ZNF726P1Q15940 193 aa4.11□□□□□ -1.75
NUP88-212ENST00000576708 LGALSLQ3ZCW2 172 aaPredicted RBP4.11□□□□□ -1.75
NUP88-212ENST00000576708 RPL7L1Q6DKI1 246 aaKnown RBP4.11□□□□□ -1.75
NUP88-212ENST00000576708 DAZ4Q86SG3 579 aaKnown RBP4.11□□□□□ -1.75
NUP88-212ENST00000576708 MTURNQ8N3F0 131 aa4.11□□□□□ -1.75
NUP88-212ENST00000576708 CYB561D1Q8N8Q1 229 aa4.11□□□□□ -1.75
NUP88-212ENST00000576708 AQP10Q96PS8 301 aa4.11□□□□□ -1.75
NUP88-212ENST00000576708 ACTR3CQ9C0K3 210 aaPredicted RBP4.11□□□□□ -1.75
NUP88-212ENST00000576708 PARLQ9H300 379 aa4.11□□□□□ -1.75
NUP88-212ENST00000576708 DAZ3Q9NR90 486 aaKnown RBP4.11□□□□□ -1.75
NUP88-212ENST00000576708 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.1□□□□□ -1.75
NUP88-212ENST00000576708 HSBP1O75506 76 aa4.1□□□□□ -1.75
NUP88-212ENST00000576708 LINC00694P0DN24 101 aa4.1□□□□□ -1.75
NUP88-212ENST00000576708 MGST1P10620 155 aaKnown RBP4.1□□□□□ -1.75
NUP88-212ENST00000576708 S100A4P26447 101 aaKnown RBP4.1□□□□□ -1.75
NUP88-212ENST00000576708 CRIP1P50238 77 aa4.1□□□□□ -1.75
NUP88-212ENST00000576708 ZFP69Q49AA0 526 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms