RNA–Protein interactions for RNA: ENST00000575194.5

SPNS3-204, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 1 (best)

Gene SPNS3, Length 1,721 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-204ENST00000575194 NSUN5P1Q3KNT7 163 aa13.68□□□□□ -0.22
SPNS3-204ENST00000575194 C2orf66Q6UXQ4 117 aa13.68□□□□□ -0.22
SPNS3-204ENST00000575194 FAM110AQ9BQ89 295 aa13.68□□□□□ -0.22
SPNS3-204ENST00000575194 EDA2RQ9HAV5 297 aa13.68□□□□□ -0.22
SPNS3-204ENST00000575194 A0A087WX48 190 aa13.67□□□□□ -0.22
SPNS3-204ENST00000575194 M0QY20 66 aa13.67□□□□□ -0.22
SPNS3-204ENST00000575194 ANKRD39Q53RE8 183 aa13.67□□□□□ -0.22
SPNS3-204ENST00000575194 CITED1Q99966 193 aa13.67□□□□□ -0.22
SPNS3-204ENST00000575194 TRBV27A0A0K0K1C4 114 aa13.67□□□□□ -0.22
SPNS3-204ENST00000575194 SDHAF1A6NFY7 115 aa13.67□□□□□ -0.22
SPNS3-204ENST00000575194 IGLV1-51P01701 117 aa13.67□□□□□ -0.22
SPNS3-204ENST00000575194 PLNP26678 52 aa13.67□□□□□ -0.22
SPNS3-204ENST00000575194 CYSLTR1Q9Y271 337 aa13.67□□□□□ -0.22
SPNS3-204ENST00000575194 WNK1Q9H4A3 2382 aa13.65□□□□□ -0.22
SPNS3-204ENST00000575194 ERASQ7Z444 233 aa13.65□□□□□ -0.22
SPNS3-204ENST00000575194 RHOHQ15669 191 aa13.64□□□□□ -0.23
SPNS3-204ENST00000575194 ZFP2Q6ZN57 461 aa13.64□□□□□ -0.23
SPNS3-204ENST00000575194 STPG4Q8N801 248 aa13.64□□□□□ -0.23
SPNS3-204ENST00000575194 TMEM208Q9BTX3 173 aa13.64□□□□□ -0.23
SPNS3-204ENST00000575194 RHODO00212 210 aa13.64□□□□□ -0.23
SPNS3-204ENST00000575194 DLEU1O43261 78 aa13.64□□□□□ -0.23
SPNS3-204ENST00000575194 HINT1P49773 126 aaPredicted RBP13.64□□□□□ -0.23
SPNS3-204ENST00000575194 RIPPLY3P57055 190 aa13.64□□□□□ -0.23
SPNS3-204ENST00000575194 C12orf54Q6X4T0 127 aa13.64□□□□□ -0.23
SPNS3-204ENST00000575194 NEGR1Q7Z3B1 354 aa13.63□□□□□ -0.23
SPNS3-204ENST00000575194 C11orf72Q8NBR9 251 aa13.63□□□□□ -0.23
SPNS3-204ENST00000575194 MRPL35Q9NZE8 188 aaKnown RBP13.63□□□□□ -0.23
SPNS3-204ENST00000575194 XCL2Q9UBD3 114 aa13.63□□□□□ -0.23
SPNS3-204ENST00000575194 TRRAPQ9Y4A5 3859 aa13.62□□□□□ -0.23
SPNS3-204ENST00000575194 F8VRH5 84 aa13.62□□□□□ -0.23
SPNS3-204ENST00000575194 FGF6P10767 208 aa13.62□□□□□ -0.23
SPNS3-204ENST00000575194 MORN3Q6PF18 240 aaPredicted RBP13.62□□□□□ -0.23
SPNS3-204ENST00000575194 BOD1L2Q8IYS8 172 aa13.62□□□□□ -0.23
SPNS3-204ENST00000575194 TMEM141Q96I45 108 aa13.62□□□□□ -0.23
SPNS3-204ENST00000575194 PF4P02776 101 aa13.61□□□□□ -0.23
SPNS3-204ENST00000575194 BEAN1Q3B7T3 259 aa13.61□□□□□ -0.23
SPNS3-204ENST00000575194 NEXN-AS1Q8NBZ9 246 aa13.61□□□□□ -0.23
SPNS3-204ENST00000575194 TP53TG1Q9Y2A0 90 aa13.61□□□□□ -0.23
SPNS3-204ENST00000575194 CHTOPQ9Y3Y2 248 aaKnown RBP13.61□□□□□ -0.23
SPNS3-204ENST00000575194 SIVA1O15304 175 aa13.61□□□□□ -0.23
SPNS3-204ENST00000575194 NMUP48645 174 aa13.61□□□□□ -0.23
SPNS3-204ENST00000575194 BAALCQ8WXS3 180 aa13.61□□□□□ -0.23
SPNS3-204ENST00000575194 HHLA3Q9XRX5 114 aa13.61□□□□□ -0.23
SPNS3-204ENST00000575194 SORL1Q92673 2214 aa13.6□□□□□ -0.23
SPNS3-204ENST00000575194 I3L3M4 83 aa13.6□□□□□ -0.23
SPNS3-204ENST00000575194 UFSP1Q6NVU6 142 aa13.6□□□□□ -0.23
SPNS3-204ENST00000575194 TIMM17AQ99595 171 aa13.6□□□□□ -0.23
SPNS3-204ENST00000575194 TP73-AS1Q9UF72 201 aa13.6□□□□□ -0.23
SPNS3-204ENST00000575194 TMEM97Q5BJF2 176 aa13.59□□□□□ -0.23
SPNS3-204ENST00000575194 ZC2HC1BQ5TFG8 222 aa13.59□□□□□ -0.23
SPNS3-204ENST00000575194 C2orf91Q6ZV80 131 aa13.59□□□□□ -0.23
SPNS3-204ENST00000575194 C1orf158Q8N1D5 194 aa13.59□□□□□ -0.23
SPNS3-204ENST00000575194 C3orf56Q8N813 242 aa13.59□□□□□ -0.23
SPNS3-204ENST00000575194 ANK2Q01484 3957 aa13.58□□□□□ -0.24
SPNS3-204ENST00000575194 MPV17L2Q567V2 206 aa13.58□□□□□ -0.24
SPNS3-204ENST00000575194 CFAP126Q5VTH2 177 aa13.58□□□□□ -0.24
SPNS3-204ENST00000575194 MDFIQ99750 246 aa13.58□□□□□ -0.24
SPNS3-204ENST00000575194 C1QTNF4Q9BXJ3 329 aa13.58□□□□□ -0.24
SPNS3-204ENST00000575194 RS1O15537 224 aa13.57□□□□□ -0.24
SPNS3-204ENST00000575194 IGIPA6NJ69 53 aa13.56□□□□□ -0.24
SPNS3-204ENST00000575194 TSHBP01222 138 aa13.56□□□□□ -0.24
SPNS3-204ENST00000575194 PAPPA-AS1Q5QFB9 102 aa13.56□□□□□ -0.24
SPNS3-204ENST00000575194 LINC00482Q8N8I6 264 aa13.56□□□□□ -0.24
SPNS3-204ENST00000575194 IL17DQ8TAD2 202 aa13.56□□□□□ -0.24
SPNS3-204ENST00000575194 MRPL16Q9NX20 251 aaKnown RBP13.56□□□□□ -0.24
SPNS3-204ENST00000575194 TNFRSF18Q9Y5U5 241 aa13.56□□□□□ -0.24
SPNS3-204ENST00000575194 PKD1L1Q8TDX9 2849 aa13.56□□□□□ -0.24
SPNS3-204ENST00000575194 IGHV3OR16-12A0A075B7B8 117 aa13.56□□□□□ -0.24
SPNS3-204ENST00000575194 PRM2P04554 102 aa13.56□□□□□ -0.24
SPNS3-204ENST00000575194 BVES-AS1Q5T3Y7 98 aa13.56□□□□□ -0.24
SPNS3-204ENST00000575194 GTSCR1Q86UQ5 136 aa13.56□□□□□ -0.24
SPNS3-204ENST00000575194 TMEM263Q8WUH6 116 aaKnown RBP13.56□□□□□ -0.24
SPNS3-204ENST00000575194 DNAJC30Q96LL9 226 aa13.56□□□□□ -0.24
SPNS3-204ENST00000575194 IGHV3-73A0A0B4J1V6 119 aa13.55□□□□□ -0.24
SPNS3-204ENST00000575194 PRSS29PA6NIE9 313 aa13.55□□□□□ -0.24
SPNS3-204ENST00000575194 TCTAP57738 103 aa13.55□□□□□ -0.24
SPNS3-204ENST00000575194 PMVKQ15126 192 aa13.55□□□□□ -0.24
SPNS3-204ENST00000575194 SHISA2Q6UWI4 295 aa13.55□□□□□ -0.24
SPNS3-204ENST00000575194 C19orf73Q9NVV2 129 aa13.55□□□□□ -0.24
SPNS3-204ENST00000575194 PCP2Q8IVA1 136 aa13.54□□□□□ -0.24
SPNS3-204ENST00000575194 RNASE8Q8TDE3 154 aaKnown RBP13.54□□□□□ -0.24
SPNS3-204ENST00000575194 IGHV3-53P01767 116 aa13.53□□□□□ -0.24
SPNS3-204ENST00000575194 RPL39P62891 51 aaKnown RBP13.53□□□□□ -0.24
SPNS3-204ENST00000575194 HSD52Q0P140 79 aa13.53□□□□□ -0.24
SPNS3-204ENST00000575194 AZU1P20160 251 aa13.53□□□□□ -0.24
SPNS3-204ENST00000575194 C20orf203Q8NBC4 194 aa13.53□□□□□ -0.24
SPNS3-204ENST00000575194 HIGD1BQ9P298 99 aa13.53□□□□□ -0.24
SPNS3-204ENST00000575194 ZMAT5Q9UDW3 170 aaKnown RBP13.53□□□□□ -0.24
SPNS3-204ENST00000575194 IGKV2D-26A0A0A0MRZ7 120 aa13.52□□□□□ -0.25
SPNS3-204ENST00000575194 INSL3P51460 131 aa13.52□□□□□ -0.25
SPNS3-204ENST00000575194 C16orf74Q96GX8 76 aa13.52□□□□□ -0.25
SPNS3-204ENST00000575194 SEC11AP67812 179 aa13.51□□□□□ -0.25
SPNS3-204ENST00000575194 TRGV1A0A0A0MS02 117 aa13.5□□□□□ -0.25
SPNS3-204ENST00000575194 RPL35AP18077 110 aaKnown RBP13.5□□□□□ -0.25
SPNS3-204ENST00000575194 CST9LQ9H4G1 147 aa13.5□□□□□ -0.25
SPNS3-204ENST00000575194 ZNF25P17030 456 aaPredicted RBP13.5□□□□□ -0.25
SPNS3-204ENST00000575194 LINC00469Q8N7U9 141 aa13.5□□□□□ -0.25
SPNS3-204ENST00000575194 OR4C5Q8NGB2 326 aa13.5□□□□□ -0.25
SPNS3-204ENST00000575194 WFDC10AQ9H1F0 79 aa13.5□□□□□ -0.25
SPNS3-204ENST00000575194 NOTCH3Q9UM47 2321 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms