RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 SPANXN1Q5VSR9 72 aa6.77□□□□□ -1.33
NPLOC4-216ENST00000574344 FAM104BQ5XKR9 115 aa6.77□□□□□ -1.33
NPLOC4-216ENST00000574344 Q6ZR54 194 aa6.77□□□□□ -1.33
NPLOC4-216ENST00000574344 PRSS3P2Q8NHM4 247 aa6.77□□□□□ -1.33
NPLOC4-216ENST00000574344 PRELID3AQ96N28 172 aa6.77□□□□□ -1.33
NPLOC4-216ENST00000574344 AP5S1Q9NUS5 200 aa6.77□□□□□ -1.33
NPLOC4-216ENST00000574344 HSPB8Q9UJY1 196 aa6.77□□□□□ -1.33
NPLOC4-216ENST00000574344 DNAH2Q9P225 4427 aa6.77□□□□□ -1.33
NPLOC4-216ENST00000574344 DNAH17Q9UFH2 4485 aa6.76□□□□□ -1.33
NPLOC4-216ENST00000574344 TRGV2A0A075B6R0 118 aa6.76□□□□□ -1.33
NPLOC4-216ENST00000574344 A0A0J9YY99 117 aa6.76□□□□□ -1.33
NPLOC4-216ENST00000574344 D6R8Y8 96 aa6.76□□□□□ -1.33
NPLOC4-216ENST00000574344 H3BVH4 76 aa6.76□□□□□ -1.33
NPLOC4-216ENST00000574344 NUPR1O60356 82 aa6.76□□□□□ -1.33
NPLOC4-216ENST00000574344 CKS2P33552 79 aa6.76□□□□□ -1.33
NPLOC4-216ENST00000574344 RNASE4P34096 147 aaKnown RBP6.76□□□□□ -1.33
NPLOC4-216ENST00000574344 VAMP8Q9BV40 100 aa6.76□□□□□ -1.33
NPLOC4-216ENST00000574344 MAP1LC3AQ9H492 121 aa6.76□□□□□ -1.33
NPLOC4-216ENST00000574344 TRGV1A0A0A0MS02 117 aa6.75□□□□□ -1.33
NPLOC4-216ENST00000574344 NBDYA0A0U1RRE5 68 aa6.75□□□□□ -1.33
NPLOC4-216ENST00000574344 A0A1B0GVY2 172 aa6.75□□□□□ -1.33
NPLOC4-216ENST00000574344 SNAI2O43623 268 aa6.75□□□□□ -1.33
NPLOC4-216ENST00000574344 LINC00614P0C842 121 aa6.75□□□□□ -1.33
NPLOC4-216ENST00000574344 BTF3P20290 206 aaKnown RBP6.75□□□□□ -1.33
NPLOC4-216ENST00000574344 PMCHL1Q16048 86 aa6.75□□□□□ -1.33
NPLOC4-216ENST00000574344 FAM159AQ6UWV7 190 aa6.75□□□□□ -1.33
NPLOC4-216ENST00000574344 Q6ZTI0 123 aa6.75□□□□□ -1.33
NPLOC4-216ENST00000574344 NIT1Q86X76 327 aa6.75□□□□□ -1.33
NPLOC4-216ENST00000574344 AMN1Q8IY45 258 aa6.75□□□□□ -1.33
NPLOC4-216ENST00000574344 AP1S3Q96PC3 154 aa6.75□□□□□ -1.33
NPLOC4-216ENST00000574344 LINC00588Q9Y4M8 146 aa6.75□□□□□ -1.33
NPLOC4-216ENST00000574344 MUC4Q99102 2169 aa6.75□□□□□ -1.33
NPLOC4-216ENST00000574344 IGKV3D-20A0A0C4DH25 116 aa6.74□□□□□ -1.33
NPLOC4-216ENST00000574344 IGHV1-24A0A0C4DH33 117 aa6.74□□□□□ -1.33
NPLOC4-216ENST00000574344 KLLNB2CW77 178 aa6.74□□□□□ -1.33
NPLOC4-216ENST00000574344 LEPROTL1O95214 131 aa6.74□□□□□ -1.33
NPLOC4-216ENST00000574344 SSTP61278 116 aa6.74□□□□□ -1.33
NPLOC4-216ENST00000574344 MRPL51Q4U2R6 128 aaKnown RBP6.74□□□□□ -1.33
NPLOC4-216ENST00000574344 ZFAND2AQ8N6M9 145 aa6.74□□□□□ -1.33
NPLOC4-216ENST00000574344 LINC00612Q8N6U2 182 aa6.74□□□□□ -1.33
NPLOC4-216ENST00000574344 OR10AG1Q8NH19 301 aa6.74□□□□□ -1.33
NPLOC4-216ENST00000574344 ZNRF2Q8NHG8 242 aa6.74□□□□□ -1.33
NPLOC4-216ENST00000574344 FAM19A4Q96LR4 140 aa6.74□□□□□ -1.33
NPLOC4-216ENST00000574344 TMEM70Q9BUB7 260 aa6.74□□□□□ -1.33
NPLOC4-216ENST00000574344 MAP1LC3CQ9BXW4 147 aa6.74□□□□□ -1.33
NPLOC4-216ENST00000574344 PHLDA3Q9Y5J5 127 aa6.74□□□□□ -1.33
NPLOC4-216ENST00000574344 FAT2Q9NYQ8 4349 aa6.73□□□□□ -1.33
NPLOC4-216ENST00000574344 MUC21A0A0G2JKD1 596 aa6.73□□□□□ -1.33
NPLOC4-216ENST00000574344 MUC21A0A140T8X8 626 aa6.73□□□□□ -1.33
NPLOC4-216ENST00000574344 SMIM17P0DL12 118 aa6.73□□□□□ -1.33
NPLOC4-216ENST00000574344 DDTP30046 118 aa6.73□□□□□ -1.33
NPLOC4-216ENST00000574344 DAZ2Q13117 558 aaKnown RBP6.73□□□□□ -1.33
NPLOC4-216ENST00000574344 ANXA2RQ3ZCQ2 193 aa6.73□□□□□ -1.33
NPLOC4-216ENST00000574344 MUC21Q5SSG8 566 aa6.73□□□□□ -1.33
NPLOC4-216ENST00000574344 PRR9Q5T870 116 aa6.73□□□□□ -1.33
NPLOC4-216ENST00000574344 TEX43Q6ZNM6 134 aa6.73□□□□□ -1.33
NPLOC4-216ENST00000574344 C6orf223Q8N319 242 aa6.73□□□□□ -1.33
NPLOC4-216ENST00000574344 FAM19A2Q8N3H0 131 aa6.73□□□□□ -1.33
NPLOC4-216ENST00000574344 MRAP2Q96G30 205 aa6.73□□□□□ -1.33
NPLOC4-216ENST00000574344 NXT2Q9NPJ8 142 aaKnown RBP6.73□□□□□ -1.33
NPLOC4-216ENST00000574344 PKHD1P08F94 4074 aa6.72□□□□□ -1.33
NPLOC4-216ENST00000574344 PKD1P98161 4303 aa6.72□□□□□ -1.33
NPLOC4-216ENST00000574344 TRGV11A0A075B6L2 103 aa6.72□□□□□ -1.33
NPLOC4-216ENST00000574344 IGHV1OR15-1A0A075B7D0 117 aa6.72□□□□□ -1.33
NPLOC4-216ENST00000574344 PPP1R17O96001 155 aa6.72□□□□□ -1.33
NPLOC4-216ENST00000574344 C3orf79P0CE67 100 aa6.72□□□□□ -1.33
NPLOC4-216ENST00000574344 ZNF415Q09FC8 603 aa6.72□□□□□ -1.33
NPLOC4-216ENST00000574344 CDPF1Q6NVV7 123 aa6.72□□□□□ -1.33
NPLOC4-216ENST00000574344 C11orf72Q8NBR9 251 aa6.72□□□□□ -1.33
NPLOC4-216ENST00000574344 SYT8Q8NBV8 401 aa6.72□□□□□ -1.33
NPLOC4-216ENST00000574344 PRO1933Q9H354 126 aa6.72□□□□□ -1.33
NPLOC4-216ENST00000574344 DPH3P1Q9H4G8 78 aa6.72□□□□□ -1.33
NPLOC4-216ENST00000574344 LINC00587B1AMM8 73 aa6.71□□□□□ -1.34
NPLOC4-216ENST00000574344 HSBP1L1C9JCN9 74 aa6.71□□□□□ -1.34
NPLOC4-216ENST00000574344 M0R381 172 aa6.71□□□□□ -1.34
NPLOC4-216ENST00000574344 NCR2O95944 276 aa6.71□□□□□ -1.34
NPLOC4-216ENST00000574344 IGHV3-53P01767 116 aa6.71□□□□□ -1.34
NPLOC4-216ENST00000574344 HBDP02042 147 aa6.71□□□□□ -1.34
NPLOC4-216ENST00000574344 TTC32Q5I0X7 151 aa6.71□□□□□ -1.34
NPLOC4-216ENST00000574344 Q6ZQT7 251 aa6.71□□□□□ -1.34
NPLOC4-216ENST00000574344 ZNF575Q86XF7 245 aa6.71□□□□□ -1.34
NPLOC4-216ENST00000574344 LINC00467Q9BRT7 94 aa6.71□□□□□ -1.34
NPLOC4-216ENST00000574344 Q9H8V8 135 aa6.71□□□□□ -1.34
NPLOC4-216ENST00000574344 MRPL16Q9NX20 251 aaKnown RBP6.71□□□□□ -1.34
NPLOC4-216ENST00000574344 C11orf21Q9P2W6 132 aa6.71□□□□□ -1.34
NPLOC4-216ENST00000574344 HERC2O95714 4834 aa6.7□□□□□ -1.34
NPLOC4-216ENST00000574344 LOC389332A0A1B0GUA5 103 aa6.7□□□□□ -1.34
NPLOC4-216ENST00000574344 H3BNG1 76 aa6.7□□□□□ -1.34
NPLOC4-216ENST00000574344 NPYP01303 97 aa6.7□□□□□ -1.34
NPLOC4-216ENST00000574344 TNP2Q05952 138 aa6.7□□□□□ -1.34
NPLOC4-216ENST00000574344 PET117Q6UWS5 81 aa6.7□□□□□ -1.34
NPLOC4-216ENST00000574344 PAM16Q9Y3D7 125 aa6.7□□□□□ -1.34
NPLOC4-216ENST00000574344 A0A096LPF7 62 aa6.69□□□□□ -1.34
NPLOC4-216ENST00000574344 SYS1-DBNDD2H3BUS1 97 aa6.69□□□□□ -1.34
NPLOC4-216ENST00000574344 PAX4O43316 350 aa6.69□□□□□ -1.34
NPLOC4-216ENST00000574344 TNFRSF6BO95407 300 aa6.69□□□□□ -1.34
NPLOC4-216ENST00000574344 MGPP08493 103 aa6.69□□□□□ -1.34
NPLOC4-216ENST00000574344 IFI27P40305 119 aaPredicted RBP6.69□□□□□ -1.34
NPLOC4-216ENST00000574344 ESRGQ1W209 222 aa6.69□□□□□ -1.34
NPLOC4-216ENST00000574344 TDRG1Q3Y452 100 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms