RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 DUX5Q96PT3 197 aa4.26□□□□□ -1.73
CDH13-213ENST00000569454 FAM110AQ9BQ89 295 aa4.26□□□□□ -1.73
CDH13-213ENST00000569454 HIGD1BQ9P298 99 aa4.26□□□□□ -1.73
CDH13-213ENST00000569454 ZNF256Q9Y2P7 627 aaPredicted RBP4.26□□□□□ -1.73
CDH13-213ENST00000569454 TNFRSF18Q9Y5U5 241 aa4.26□□□□□ -1.73
CDH13-213ENST00000569454 KIF25-AS1Q9Y6Z4 181 aa4.26□□□□□ -1.73
CDH13-213ENST00000569454 TRAV26-2A0A0B4J265 109 aa4.25□□□□□ -1.73
CDH13-213ENST00000569454 RHODO00212 210 aa4.25□□□□□ -1.73
CDH13-213ENST00000569454 GNRH2O43555 120 aa4.25□□□□□ -1.73
CDH13-213ENST00000569454 GAS8-AS1O95177 125 aa4.25□□□□□ -1.73
CDH13-213ENST00000569454 RNASE1P07998 156 aaKnown RBP4.25□□□□□ -1.73
CDH13-213ENST00000569454 FGF6P10767 208 aa4.25□□□□□ -1.73
CDH13-213ENST00000569454 SLURP1P55000 103 aa4.25□□□□□ -1.73
CDH13-213ENST00000569454 ZNF415Q09FC8 603 aa4.25□□□□□ -1.73
CDH13-213ENST00000569454 FHL3Q13643 280 aa4.25□□□□□ -1.73
CDH13-213ENST00000569454 MPV17L2Q567V2 206 aa4.25□□□□□ -1.73
CDH13-213ENST00000569454 KHDC1LQ5JSQ8 128 aa4.25□□□□□ -1.73
CDH13-213ENST00000569454 BVES-AS1Q5T3Y7 98 aa4.25□□□□□ -1.73
CDH13-213ENST00000569454 Q6ZSV7 163 aa4.25□□□□□ -1.73
CDH13-213ENST00000569454 TRPT1Q86TN4 253 aaKnown RBP4.25□□□□□ -1.73
CDH13-213ENST00000569454 STPG4Q8N801 248 aa4.25□□□□□ -1.73
CDH13-213ENST00000569454 KLHL30-AS1Q8NEE0 82 aa4.25□□□□□ -1.73
CDH13-213ENST00000569454 OR11H1Q8NG94 326 aa4.25□□□□□ -1.73
CDH13-213ENST00000569454 RNASE8Q8TDE3 154 aaKnown RBP4.25□□□□□ -1.73
CDH13-213ENST00000569454 TMEM141Q96I45 108 aa4.25□□□□□ -1.73
CDH13-213ENST00000569454 C18orf15Q96N68 181 aa4.25□□□□□ -1.73
CDH13-213ENST00000569454 SCGB3A1Q96QR1 104 aa4.25□□□□□ -1.73
CDH13-213ENST00000569454 TIMM17AQ99595 171 aa4.25□□□□□ -1.73
CDH13-213ENST00000569454 TMEM208Q9BTX3 173 aa4.25□□□□□ -1.73
CDH13-213ENST00000569454 C16orf95Q9H693 158 aa4.25□□□□□ -1.73
CDH13-213ENST00000569454 COX11Q9Y6N1 276 aa4.25□□□□□ -1.73
CDH13-213ENST00000569454 TRBV27A0A0K0K1C4 114 aa4.24□□□□□ -1.73
CDH13-213ENST00000569454 A8MWV9 139 aa4.24□□□□□ -1.73
CDH13-213ENST00000569454 H3BMM0 161 aa4.24□□□□□ -1.73
CDH13-213ENST00000569454 INSP01308 110 aa4.24□□□□□ -1.73
CDH13-213ENST00000569454 NPSP0C0P6 89 aa4.24□□□□□ -1.73
CDH13-213ENST00000569454 EDN2P20800 178 aa4.24□□□□□ -1.73
CDH13-213ENST00000569454 POLR2KP53803 58 aaKnown RBP4.24□□□□□ -1.73
CDH13-213ENST00000569454 LINC00315P59091 139 aa4.24□□□□□ -1.73
CDH13-213ENST00000569454 DEFB131AP59861 70 aa4.24□□□□□ -1.73
CDH13-213ENST00000569454 DEFB1P60022 68 aa4.24□□□□□ -1.73
CDH13-213ENST00000569454 TNP2Q05952 138 aa4.24□□□□□ -1.73
CDH13-213ENST00000569454 ZNF56Q15929 161 aa4.24□□□□□ -1.73
CDH13-213ENST00000569454 SPINK13Q1W4C9 94 aa4.24□□□□□ -1.73
CDH13-213ENST00000569454 NSUN5P1Q3KNT7 163 aa4.24□□□□□ -1.73
CDH13-213ENST00000569454 SUMO4Q6EEV6 95 aa4.24□□□□□ -1.73
CDH13-213ENST00000569454 C2orf66Q6UXQ4 117 aa4.24□□□□□ -1.73
CDH13-213ENST00000569454 Q6ZQT7 251 aa4.24□□□□□ -1.73
CDH13-213ENST00000569454 C2orf91Q6ZV80 131 aa4.24□□□□□ -1.73
CDH13-213ENST00000569454 TMEM61Q8N0U2 210 aa4.24□□□□□ -1.73
CDH13-213ENST00000569454 Q8N1Y9 231 aa4.24□□□□□ -1.73
CDH13-213ENST00000569454 WFDC11Q8NEX6 87 aa4.24□□□□□ -1.73
CDH13-213ENST00000569454 ZNF418Q8TF45 676 aaPredicted RBP4.24□□□□□ -1.73
CDH13-213ENST00000569454 CSTL1Q9H114 145 aa4.24□□□□□ -1.73
CDH13-213ENST00000569454 GEMIN7Q9H840 131 aaKnown RBP4.24□□□□□ -1.73
CDH13-213ENST00000569454 DKK2Q9UBU2 259 aa4.24□□□□□ -1.73
CDH13-213ENST00000569454 TSSC4Q9Y5U2 329 aaPredicted RBP4.24□□□□□ -1.73
CDH13-213ENST00000569454 SDHAF1A6NFY7 115 aa4.23□□□□□ -1.73
CDH13-213ENST00000569454 OR11H12B2RN74 326 aa4.23□□□□□ -1.73
CDH13-213ENST00000569454 F5H697 171 aa4.23□□□□□ -1.73
CDH13-213ENST00000569454 NDUFA7O95182 113 aa4.23□□□□□ -1.73
CDH13-213ENST00000569454 GHRHP01286 108 aa4.23□□□□□ -1.73
CDH13-213ENST00000569454 NMUP48645 174 aa4.23□□□□□ -1.73
CDH13-213ENST00000569454 FXYD7P58549 80 aa4.23□□□□□ -1.73
CDH13-213ENST00000569454 HERVK_113P61574 105 aa4.23□□□□□ -1.73
CDH13-213ENST00000569454 TAL2Q16559 108 aa4.23□□□□□ -1.73
CDH13-213ENST00000569454 DEFB114Q30KQ6 69 aa4.23□□□□□ -1.73
CDH13-213ENST00000569454 ZNF876PQ49A33 203 aa4.23□□□□□ -1.73
CDH13-213ENST00000569454 ZC2HC1BQ5TFG8 222 aa4.23□□□□□ -1.73
CDH13-213ENST00000569454 ADAMTSL5Q6ZMM2 481 aa4.23□□□□□ -1.73
CDH13-213ENST00000569454 NEXN-AS1Q8NBZ9 246 aa4.23□□□□□ -1.73
CDH13-213ENST00000569454 OR11H2Q8NH07 326 aa4.23□□□□□ -1.73
CDH13-213ENST00000569454 RPL39LQ96EH5 51 aaKnown RBP4.23□□□□□ -1.73
CDH13-213ENST00000569454 MCRIP2Q9BUT9 160 aaKnown RBP4.23□□□□□ -1.73
CDH13-213ENST00000569454 C1orf43Q9BWL3 253 aa4.23□□□□□ -1.73
CDH13-213ENST00000569454 MAP6D1Q9H9H5 199 aa4.23□□□□□ -1.73
CDH13-213ENST00000569454 MRPL35Q9NZE8 188 aaKnown RBP4.23□□□□□ -1.73
CDH13-213ENST00000569454 HHLA3Q9XRX5 114 aa4.23□□□□□ -1.73
CDH13-213ENST00000569454 TRAV12-2A0A075B6T6 113 aa4.22□□□□□ -1.73
CDH13-213ENST00000569454 A8MZ25 164 aa4.22□□□□□ -1.73
CDH13-213ENST00000569454 M0QY20 66 aa4.22□□□□□ -1.73
CDH13-213ENST00000569454 M0R2P5 195 aa4.22□□□□□ -1.73
CDH13-213ENST00000569454 CCL24O00175 119 aa4.22□□□□□ -1.73
CDH13-213ENST00000569454 IGKV3-20P01619 116 aa4.22□□□□□ -1.73
CDH13-213ENST00000569454 CRYGDP07320 174 aa4.22□□□□□ -1.73
CDH13-213ENST00000569454 CRYBA4P53673 196 aa4.22□□□□□ -1.73
CDH13-213ENST00000569454 DEFB136Q30KP8 78 aa4.22□□□□□ -1.73
CDH13-213ENST00000569454 FAM74A4Q5TZK3 123 aa4.22□□□□□ -1.73
CDH13-213ENST00000569454 ZFP2Q6ZN57 461 aa4.22□□□□□ -1.73
CDH13-213ENST00000569454 BAALCQ8WXS3 180 aa4.22□□□□□ -1.73
CDH13-213ENST00000569454 DLX4Q92988 240 aaPredicted RBP4.22□□□□□ -1.73
CDH13-213ENST00000569454 DUX3Q96PT4 197 aa4.22□□□□□ -1.73
CDH13-213ENST00000569454 MDFICQ9P1T7 246 aa4.22□□□□□ -1.73
CDH13-213ENST00000569454 ZANQ9Y493 2812 aa4.22□□□□□ -1.73
CDH13-213ENST00000569454 A0A087WWL8 130 aa4.21□□□□□ -1.74
CDH13-213ENST00000569454 E9PLD3 99 aa4.21□□□□□ -1.74
CDH13-213ENST00000569454 H3BRM9 83 aa4.21□□□□□ -1.74
CDH13-213ENST00000569454 I3L3M4 83 aa4.21□□□□□ -1.74
CDH13-213ENST00000569454 HILS1P60008 231 aa4.21□□□□□ -1.74
CDH13-213ENST00000569454 KRTAP1-1Q07627 177 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms