RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 C9orf66Q5T8R8 295 aa4.48□□□□□ -1.69
CHD9-217ENST00000565832 MORN3Q6PF18 240 aaPredicted RBP4.48□□□□□ -1.69
CHD9-217ENST00000565832 POM121L12Q8N7R1 296 aa4.48□□□□□ -1.69
CHD9-217ENST00000565832 WFDC9Q8NEX5 89 aa4.48□□□□□ -1.69
CHD9-217ENST00000565832 M0QY20 66 aa4.47□□□□□ -1.69
CHD9-217ENST00000565832 M0R2P5 195 aa4.47□□□□□ -1.69
CHD9-217ENST00000565832 SUMO2P61956 95 aaKnown RBP4.47□□□□□ -1.69
CHD9-217ENST00000565832 Q6ZTI0 123 aa4.47□□□□□ -1.69
CHD9-217ENST00000565832 GTSCR1Q86UQ5 136 aa4.47□□□□□ -1.69
CHD9-217ENST00000565832 RNASE8Q8TDE3 154 aaKnown RBP4.47□□□□□ -1.69
CHD9-217ENST00000565832 MRAP2Q96G30 205 aa4.47□□□□□ -1.69
CHD9-217ENST00000565832 WWC2-AS2Q96NR7 200 aa4.47□□□□□ -1.69
CHD9-217ENST00000565832 ZNF747Q9BV97 191 aa4.47□□□□□ -1.69
CHD9-217ENST00000565832 NOP10Q9NPE3 64 aaKnown RBP4.47□□□□□ -1.69
CHD9-217ENST00000565832 TRGV1A0A0A0MS02 117 aa4.47□□□□□ -1.69
CHD9-217ENST00000565832 PLAC8L1A1L4L8 177 aa4.47□□□□□ -1.69
CHD9-217ENST00000565832 IGHV3-53P01767 116 aa4.47□□□□□ -1.69
CHD9-217ENST00000565832 INSL3P51460 131 aa4.47□□□□□ -1.69
CHD9-217ENST00000565832 CMC4P56277 68 aaPredicted RBP4.47□□□□□ -1.69
CHD9-217ENST00000565832 KRTAP10-11P60412 298 aa4.47□□□□□ -1.69
CHD9-217ENST00000565832 CFAP126Q5VTH2 177 aa4.47□□□□□ -1.69
CHD9-217ENST00000565832 Q8N8P6 123 aa4.47□□□□□ -1.69
CHD9-217ENST00000565832 TMEM158Q8WZ71 300 aa4.47□□□□□ -1.69
CHD9-217ENST00000565832 FAM110AQ9BQ89 295 aa4.47□□□□□ -1.69
CHD9-217ENST00000565832 CSTL1Q9H114 145 aa4.47□□□□□ -1.69
CHD9-217ENST00000565832 PAM16Q9Y3D7 125 aa4.47□□□□□ -1.69
CHD9-217ENST00000565832 SYS1-DBNDD2H3BUS1 97 aa4.46□□□□□ -1.7
CHD9-217ENST00000565832 DEFB4AO15263 64 aa4.46□□□□□ -1.7
CHD9-217ENST00000565832 ZNF415Q09FC8 603 aa4.46□□□□□ -1.7
CHD9-217ENST00000565832 UFSP1Q6NVU6 142 aa4.46□□□□□ -1.7
CHD9-217ENST00000565832 TMEM70Q9BUB7 260 aa4.46□□□□□ -1.7
CHD9-217ENST00000565832 NXT2Q9NPJ8 142 aaKnown RBP4.46□□□□□ -1.7
CHD9-217ENST00000565832 LAMTOR2Q9Y2Q5 125 aa4.46□□□□□ -1.7
CHD9-217ENST00000565832 DNAH3Q8TD57 4116 aa4.46□□□□□ -1.7
CHD9-217ENST00000565832 LINC01546A6NGU7 62 aa4.46□□□□□ -1.7
CHD9-217ENST00000565832 PRSS47A8MTI9 375 aa4.46□□□□□ -1.7
CHD9-217ENST00000565832 LINC00587B1AMM8 73 aa4.46□□□□□ -1.7
CHD9-217ENST00000565832 RIPPLY3P57055 190 aa4.46□□□□□ -1.7
CHD9-217ENST00000565832 TCTAP57738 103 aa4.46□□□□□ -1.7
CHD9-217ENST00000565832 LAGE3Q14657 143 aa4.46□□□□□ -1.7
CHD9-217ENST00000565832 ZNF705AQ6ZN79 300 aaPredicted RBP4.46□□□□□ -1.7
CHD9-217ENST00000565832 ZNF479Q96JC4 524 aa4.46□□□□□ -1.7
CHD9-217ENST00000565832 SMIM2Q9BVW6 85 aa4.46□□□□□ -1.7
CHD9-217ENST00000565832 COL7A1Q02388 2944 aa4.45□□□□□ -1.7
CHD9-217ENST00000565832 SDHAF1A6NFY7 115 aa4.45□□□□□ -1.7
CHD9-217ENST00000565832 NUDT3O95989 172 aa4.45□□□□□ -1.7
CHD9-217ENST00000565832 HBDP02042 147 aa4.45□□□□□ -1.7
CHD9-217ENST00000565832 FCER1GP30273 86 aa4.45□□□□□ -1.7
CHD9-217ENST00000565832 POLR2KP53803 58 aaKnown RBP4.45□□□□□ -1.7
CHD9-217ENST00000565832 DEFB135Q30KP9 77 aa4.45□□□□□ -1.7
CHD9-217ENST00000565832 C12orf54Q6X4T0 127 aa4.45□□□□□ -1.7
CHD9-217ENST00000565832 TEX43Q6ZNM6 134 aa4.45□□□□□ -1.7
CHD9-217ENST00000565832 C20orf144Q9BQM9 153 aa4.45□□□□□ -1.7
CHD9-217ENST00000565832 LINC00467Q9BRT7 94 aa4.45□□□□□ -1.7
CHD9-217ENST00000565832 MAP1LC3CQ9BXW4 147 aa4.45□□□□□ -1.7
CHD9-217ENST00000565832 ST20Q9HBF5 79 aa4.45□□□□□ -1.7
CHD9-217ENST00000565832 TP73-AS1Q9UF72 201 aa4.45□□□□□ -1.7
CHD9-217ENST00000565832 hDV102S1A0JD36 115 aa4.44□□□□□ -1.7
CHD9-217ENST00000565832 GAGE12BA1L429 117 aa4.44□□□□□ -1.7
CHD9-217ENST00000565832 GAGE7O76087 117 aa4.44□□□□□ -1.7
CHD9-217ENST00000565832 GAGE12FP0CL80 117 aa4.44□□□□□ -1.7
CHD9-217ENST00000565832 GAGE12GP0CL81 117 aa4.44□□□□□ -1.7
CHD9-217ENST00000565832 GAGE12IP0CL82 117 aa4.44□□□□□ -1.7
CHD9-217ENST00000565832 RPL39P62891 51 aaKnown RBP4.44□□□□□ -1.7
CHD9-217ENST00000565832 S100A12P80511 92 aa4.44□□□□□ -1.7
CHD9-217ENST00000565832 TMEM263Q8WUH6 116 aaKnown RBP4.44□□□□□ -1.7
CHD9-217ENST00000565832 C20orf78Q9BR46 151 aa4.44□□□□□ -1.7
CHD9-217ENST00000565832 HSPB8Q9UJY1 196 aa4.44□□□□□ -1.7
CHD9-217ENST00000565832 GOLT1BQ9Y3E0 138 aa4.44□□□□□ -1.7
CHD9-217ENST00000565832 IGHV3-38A0A0C4DH36 116 aa4.44□□□□□ -1.7
CHD9-217ENST00000565832 KRTAP23-1A1A580 65 aa4.44□□□□□ -1.7
CHD9-217ENST00000565832 G3V4G9 280 aa4.44□□□□□ -1.7
CHD9-217ENST00000565832 PRB2P02812 416 aaPredicted RBP4.44□□□□□ -1.7
CHD9-217ENST00000565832 IGHV4-30-4P0DP06 118 aa4.44□□□□□ -1.7
CHD9-217ENST00000565832 RRN3P1Q2M238 152 aa4.44□□□□□ -1.7
CHD9-217ENST00000565832 ZC2HC1BQ5TFG8 222 aa4.44□□□□□ -1.7
CHD9-217ENST00000565832 IL17DQ8TAD2 202 aa4.44□□□□□ -1.7
CHD9-217ENST00000565832 IFI27L1Q96BM0 104 aa4.44□□□□□ -1.7
CHD9-217ENST00000565832 DKK2Q9UBU2 259 aa4.44□□□□□ -1.7
CHD9-217ENST00000565832 A8MWV9 139 aa4.43□□□□□ -1.7
CHD9-217ENST00000565832 PRSS1P07477 247 aa4.43□□□□□ -1.7
CHD9-217ENST00000565832 DEFB130BP0DP73 79 aa4.43□□□□□ -1.7
CHD9-217ENST00000565832 DEFB130AP0DP74 79 aa4.43□□□□□ -1.7
CHD9-217ENST00000565832 OR4C5Q8NGB2 326 aa4.43□□□□□ -1.7
CHD9-217ENST00000565832 C14orf144Q96I85 54 aa4.43□□□□□ -1.7
CHD9-217ENST00000565832 OPRPNQ99935 248 aaPredicted RBP4.43□□□□□ -1.7
CHD9-217ENST00000565832 SPXQ9BT56 116 aa4.43□□□□□ -1.7
CHD9-217ENST00000565832 C1QTNF4Q9BXJ3 329 aa4.43□□□□□ -1.7
CHD9-217ENST00000565832 VCYO14598 125 aa4.43□□□□□ -1.7
CHD9-217ENST00000565832 RS1O15537 224 aa4.43□□□□□ -1.7
CHD9-217ENST00000565832 TRIAP1O43715 76 aa4.43□□□□□ -1.7
CHD9-217ENST00000565832 PKIAP61925 76 aa4.43□□□□□ -1.7
CHD9-217ENST00000565832 ZFP2Q6ZN57 461 aa4.43□□□□□ -1.7
CHD9-217ENST00000565832 STPG4Q8N801 248 aa4.43□□□□□ -1.7
CHD9-217ENST00000565832 PHLDA1Q8WV24 401 aaPredicted RBP4.43□□□□□ -1.7
CHD9-217ENST00000565832 VAMP8Q9BV40 100 aa4.43□□□□□ -1.7
CHD9-217ENST00000565832 TRGV2A0A075B6R0 118 aa4.42□□□□□ -1.7
CHD9-217ENST00000565832 TRBV27A0A0K0K1C4 114 aa4.42□□□□□ -1.7
CHD9-217ENST00000565832 LOC100131303A0A0U1RQF7 123 aa4.42□□□□□ -1.7
CHD9-217ENST00000565832 DAZ2Q13117 558 aaKnown RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms