RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 ALKBH7Q9BT30 221 aaPredicted RBP7.85□□□□□ -1.15
SF3B3-205ENST00000564899 GAS8-AS1O95177 125 aa7.84□□□□□ -1.15
SF3B3-205ENST00000564899 GATA1P15976 413 aaPredicted RBP7.84□□□□□ -1.15
SF3B3-205ENST00000564899 TRGV4A0A0C4DH28 118 aa7.83□□□□□ -1.16
SF3B3-205ENST00000564899 H7C1H1 209 aa7.83□□□□□ -1.16
SF3B3-205ENST00000564899 M0QY20 66 aa7.83□□□□□ -1.16
SF3B3-205ENST00000564899 HIST1H2BKO60814 126 aa7.83□□□□□ -1.16
SF3B3-205ENST00000564899 NPYP01303 97 aa7.83□□□□□ -1.16
SF3B3-205ENST00000564899 HIST1H2BJP06899 126 aa7.83□□□□□ -1.16
SF3B3-205ENST00000564899 HIST1H2BOP23527 126 aa7.83□□□□□ -1.16
SF3B3-205ENST00000564899 HIST1H2BBP33778 126 aa7.83□□□□□ -1.16
SF3B3-205ENST00000564899 HIST1H2BDP58876 126 aa7.83□□□□□ -1.16
SF3B3-205ENST00000564899 HIST1H2BCP62807 126 aa7.83□□□□□ -1.16
SF3B3-205ENST00000564899 HIST2H2BEQ16778 126 aa7.83□□□□□ -1.16
SF3B3-205ENST00000564899 C12orf74Q32Q52 190 aa7.83□□□□□ -1.16
SF3B3-205ENST00000564899 OR10J3Q5JRS4 329 aa7.83□□□□□ -1.16
SF3B3-205ENST00000564899 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.83□□□□□ -1.16
SF3B3-205ENST00000564899 Q6ZSN1 163 aa7.83□□□□□ -1.16
SF3B3-205ENST00000564899 HIST1H2BHQ93079 126 aa7.83□□□□□ -1.16
SF3B3-205ENST00000564899 HIST1H2BNQ99877 126 aa7.83□□□□□ -1.16
SF3B3-205ENST00000564899 HIST1H2BMQ99879 126 aa7.83□□□□□ -1.16
SF3B3-205ENST00000564899 LAMTOR2Q9Y2Q5 125 aa7.83□□□□□ -1.16
SF3B3-205ENST00000564899 TMA7Q9Y2S6 64 aaKnown RBP7.83□□□□□ -1.16
SF3B3-205ENST00000564899 K7EQD1 137 aa7.82□□□□□ -1.16
SF3B3-205ENST00000564899 TNFRSF6BO95407 300 aa7.82□□□□□ -1.16
SF3B3-205ENST00000564899 PPP1R17O96001 155 aa7.82□□□□□ -1.16
SF3B3-205ENST00000564899 ATP5G1P05496 136 aa7.82□□□□□ -1.16
SF3B3-205ENST00000564899 FHL2Q14192 279 aa7.82□□□□□ -1.16
SF3B3-205ENST00000564899 NRACQ8N912 160 aa7.82□□□□□ -1.16
SF3B3-205ENST00000564899 C11orf45Q8TAV5 145 aa7.82□□□□□ -1.16
SF3B3-205ENST00000564899 RPL39LQ96EH5 51 aaKnown RBP7.82□□□□□ -1.16
SF3B3-205ENST00000564899 P0DMU3 169 aa7.81□□□□□ -1.16
SF3B3-205ENST00000564899 FAM231AP0DMU4 169 aa7.81□□□□□ -1.16
SF3B3-205ENST00000564899 FAM231CP0DMU5 169 aa7.81□□□□□ -1.16
SF3B3-205ENST00000564899 HTN3P15516 51 aa7.81□□□□□ -1.16
SF3B3-205ENST00000564899 HOXA5P20719 270 aa7.81□□□□□ -1.16
SF3B3-205ENST00000564899 NANOS2P60321 138 aaKnown RBP7.81□□□□□ -1.16
SF3B3-205ENST00000564899 IQCJQ1A5X6 159 aa7.81□□□□□ -1.16
SF3B3-205ENST00000564899 SLC25A29Q8N8R3 303 aa7.81□□□□□ -1.16
SF3B3-205ENST00000564899 C18orf32Q8TCD1 76 aa7.81□□□□□ -1.16
SF3B3-205ENST00000564899 TRBV6-4A0A1B0GX49 114 aa7.8□□□□□ -1.16
SF3B3-205ENST00000564899 RHOHQ15669 191 aa7.8□□□□□ -1.16
SF3B3-205ENST00000564899 Q6ZTC4 211 aa7.8□□□□□ -1.16
SF3B3-205ENST00000564899 MAP1LC3AQ9H492 121 aa7.8□□□□□ -1.16
SF3B3-205ENST00000564899 ST20Q9HBF5 79 aa7.8□□□□□ -1.16
SF3B3-205ENST00000564899 NIT2Q9NQR4 276 aa7.8□□□□□ -1.16
SF3B3-205ENST00000564899 TRBV10-1A0A0K0K1A3 114 aa7.79□□□□□ -1.16
SF3B3-205ENST00000564899 TRBV6-5A0A0K0K1A5 114 aa7.79□□□□□ -1.16
SF3B3-205ENST00000564899 LOC389332A0A1B0GUA5 103 aa7.79□□□□□ -1.16
SF3B3-205ENST00000564899 F5H768 121 aa7.79□□□□□ -1.16
SF3B3-205ENST00000564899 SUMO2P61956 95 aaKnown RBP7.79□□□□□ -1.16
SF3B3-205ENST00000564899 Q0VG73 95 aa7.79□□□□□ -1.16
SF3B3-205ENST00000564899 BAGE3Q86Y29 109 aa7.79□□□□□ -1.16
SF3B3-205ENST00000564899 NEXN-AS1Q8NBZ9 246 aa7.79□□□□□ -1.16
SF3B3-205ENST00000564899 C20orf78Q9BR46 151 aa7.79□□□□□ -1.16
SF3B3-205ENST00000564899 PRADC1Q9BSG0 188 aa7.79□□□□□ -1.16
SF3B3-205ENST00000564899 PRO0255Q9UI72 69 aa7.79□□□□□ -1.16
SF3B3-205ENST00000564899 HHLA3Q9XRX5 114 aa7.79□□□□□ -1.16
SF3B3-205ENST00000564899 TNFRSF18Q9Y5U5 241 aa7.79□□□□□ -1.16
SF3B3-205ENST00000564899 VPS13DQ5THJ4 4388 aa7.79□□□□□ -1.16
SF3B3-205ENST00000564899 CRYBA4P53673 196 aa7.78□□□□□ -1.16
SF3B3-205ENST00000564899 NDUFA6P56556 154 aa7.78□□□□□ -1.16
SF3B3-205ENST00000564899 DNAJC30Q96LL9 226 aa7.78□□□□□ -1.16
SF3B3-205ENST00000564899 SMIM2Q9BVW6 85 aa7.78□□□□□ -1.16
SF3B3-205ENST00000564899 Q9UF83 564 aa7.78□□□□□ -1.16
SF3B3-205ENST00000564899 NACAE9PAV3 2078 aa7.78□□□□□ -1.16
SF3B3-205ENST00000564899 TRAV26-1A0A087WT03 109 aa7.77□□□□□ -1.17
SF3B3-205ENST00000564899 LOC100131303A0A0U1RQF7 123 aa7.77□□□□□ -1.17
SF3B3-205ENST00000564899 GAGE12JA6NER3 117 aa7.77□□□□□ -1.17
SF3B3-205ENST00000564899 SDHAF1A6NFY7 115 aa7.77□□□□□ -1.17
SF3B3-205ENST00000564899 PRSS47A8MTI9 375 aa7.77□□□□□ -1.17
SF3B3-205ENST00000564899 PAX4O43316 350 aa7.77□□□□□ -1.17
SF3B3-205ENST00000564899 S100A6P06703 90 aa7.77□□□□□ -1.17
SF3B3-205ENST00000564899 PMCHP20382 165 aa7.77□□□□□ -1.17
SF3B3-205ENST00000564899 IFI27P40305 119 aaPredicted RBP7.77□□□□□ -1.17
SF3B3-205ENST00000564899 RPL36AP83881 106 aaKnown RBP7.77□□□□□ -1.17
SF3B3-205ENST00000564899 GAGE1Q13065 139 aa7.77□□□□□ -1.17
SF3B3-205ENST00000564899 GAGE4Q13068 117 aa7.77□□□□□ -1.17
SF3B3-205ENST00000564899 GAGE5Q13069 117 aa7.77□□□□□ -1.17
SF3B3-205ENST00000564899 GAGE13Q4V321 117 aa7.77□□□□□ -1.17
SF3B3-205ENST00000564899 FA2HQ7L5A8 372 aa7.77□□□□□ -1.17
SF3B3-205ENST00000564899 ZNRF2Q8NHG8 242 aa7.77□□□□□ -1.17
SF3B3-205ENST00000564899 PRSS3P2Q8NHM4 247 aa7.77□□□□□ -1.17
SF3B3-205ENST00000564899 RPL36ALQ969Q0 106 aaKnown RBP7.77□□□□□ -1.17
SF3B3-205ENST00000564899 TMEM70Q9BUB7 260 aa7.77□□□□□ -1.17
SF3B3-205ENST00000564899 NXT2Q9NPJ8 142 aaKnown RBP7.77□□□□□ -1.17
SF3B3-205ENST00000564899 DEFB131BA0A096LNP1 70 aa7.76□□□□□ -1.17
SF3B3-205ENST00000564899 TRAV10A0A0B4J240 114 aa7.76□□□□□ -1.17
SF3B3-205ENST00000564899 A0A0J9YY99 117 aa7.76□□□□□ -1.17
SF3B3-205ENST00000564899 SERF1AO75920 110 aa7.76□□□□□ -1.17
SF3B3-205ENST00000564899 GYPEP15421 78 aa7.76□□□□□ -1.17
SF3B3-205ENST00000564899 POLR2KP53803 58 aaKnown RBP7.76□□□□□ -1.17
SF3B3-205ENST00000564899 RPL32P62910 135 aaKnown RBP7.76□□□□□ -1.17
SF3B3-205ENST00000564899 RNASEKQ6P5S7 137 aaKnown RBP7.76□□□□□ -1.17
SF3B3-205ENST00000564899 NEGR1Q7Z3B1 354 aa7.76□□□□□ -1.17
SF3B3-205ENST00000564899 NIT1Q86X76 327 aa7.76□□□□□ -1.17
SF3B3-205ENST00000564899 Q8N8P6 123 aa7.76□□□□□ -1.17
SF3B3-205ENST00000564899 PKHD1P08F94 4074 aa7.75□□□□□ -1.17
SF3B3-205ENST00000564899 IGLV2-18A0A075B6J9 118 aa7.75□□□□□ -1.17
SF3B3-205ENST00000564899 TRBV7-3A0A075B6L6 115 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms