RNA–Protein interactions for RNA: ENST00000564105.5

CTU2-204, Transcript of cytosolic thiouridylase subunit 2, humanhuman

TSL 1 (best)

Gene CTU2, Length 1,586 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-204ENST00000564105 VSIG2Q96IQ7 327 aa13.41□□□□□ -0.26
CTU2-204ENST00000564105 Q9UF83 564 aa13.41□□□□□ -0.26
CTU2-204ENST00000564105 TRBV10-1A0A0K0K1A3 114 aa13.41□□□□□ -0.26
CTU2-204ENST00000564105 LOC100131303A0A0U1RQF7 123 aa13.41□□□□□ -0.26
CTU2-204ENST00000564105 NEXN-AS1Q8NBZ9 246 aa13.41□□□□□ -0.26
CTU2-204ENST00000564105 NIT2Q9NQR4 276 aa13.41□□□□□ -0.26
CTU2-204ENST00000564105 TRGC2P03986 189 aa13.4□□□□□ -0.26
CTU2-204ENST00000564105 GYPEP15421 78 aa13.4□□□□□ -0.26
CTU2-204ENST00000564105 OR10J3Q5JRS4 329 aa13.4□□□□□ -0.26
CTU2-204ENST00000564105 PRELID3AQ96N28 172 aa13.4□□□□□ -0.26
CTU2-204ENST00000564105 CSMD3Q7Z407 3707 aa13.4□□□□□ -0.26
CTU2-204ENST00000564105 NRACQ8N912 160 aa13.39□□□□□ -0.27
CTU2-204ENST00000564105 PPP1R17O96001 155 aa13.38□□□□□ -0.27
CTU2-204ENST00000564105 RPL36AP83881 106 aaKnown RBP13.38□□□□□ -0.27
CTU2-204ENST00000564105 ZNRF2Q8NHG8 242 aa13.38□□□□□ -0.27
CTU2-204ENST00000564105 RPL36ALQ969Q0 106 aaKnown RBP13.38□□□□□ -0.27
CTU2-204ENST00000564105 DNAJC30Q96LL9 226 aa13.38□□□□□ -0.27
CTU2-204ENST00000564105 TNFRSF18Q9Y5U5 241 aa13.38□□□□□ -0.27
CTU2-204ENST00000564105 DYNC2H1Q8NCM8 4307 aaKnown RBP13.38□□□□□ -0.27
CTU2-204ENST00000564105 GAGE12JA6NER3 117 aa13.37□□□□□ -0.27
CTU2-204ENST00000564105 H3BNG1 76 aa13.37□□□□□ -0.27
CTU2-204ENST00000564105 TNFRSF6BO95407 300 aa13.37□□□□□ -0.27
CTU2-204ENST00000564105 NPYP01303 97 aa13.37□□□□□ -0.27
CTU2-204ENST00000564105 GAGE1Q13065 139 aa13.37□□□□□ -0.27
CTU2-204ENST00000564105 GAGE4Q13068 117 aa13.37□□□□□ -0.27
CTU2-204ENST00000564105 GAGE5Q13069 117 aa13.37□□□□□ -0.27
CTU2-204ENST00000564105 GAGE13Q4V321 117 aa13.37□□□□□ -0.27
CTU2-204ENST00000564105 TRBV7-3A0A075B6L6 115 aa13.37□□□□□ -0.27
CTU2-204ENST00000564105 SRIP30626 198 aa13.37□□□□□ -0.27
CTU2-204ENST00000564105 ALKBH7Q9BT30 221 aaPredicted RBP13.37□□□□□ -0.27
CTU2-204ENST00000564105 IGLL5B9A064 214 aa13.36□□□□□ -0.27
CTU2-204ENST00000564105 CEMP1Q6PRD7 247 aaPredicted RBP13.36□□□□□ -0.27
CTU2-204ENST00000564105 LAMTOR2Q9Y2Q5 125 aa13.36□□□□□ -0.27
CTU2-204ENST00000564105 ICOSQ9Y6W8 199 aa13.36□□□□□ -0.27
CTU2-204ENST00000564105 TRBV6-5A0A0K0K1A5 114 aa13.35□□□□□ -0.27
CTU2-204ENST00000564105 NUPR2A6NF83 97 aa13.35□□□□□ -0.27
CTU2-204ENST00000564105 PHOX2AO14813 284 aa13.35□□□□□ -0.27
CTU2-204ENST00000564105 ST20Q9HBF5 79 aa13.35□□□□□ -0.27
CTU2-204ENST00000564105 MRPL23Q16540 153 aaKnown RBP13.34□□□□□ -0.27
CTU2-204ENST00000564105 MUC7Q8TAX7 377 aa13.34□□□□□ -0.27
CTU2-204ENST00000564105 A0A096LPF7 62 aa13.33□□□□□ -0.28
CTU2-204ENST00000564105 SDHAF1A6NFY7 115 aa13.33□□□□□ -0.28
CTU2-204ENST00000564105 C3orf84H3BNL1 204 aa13.33□□□□□ -0.28
CTU2-204ENST00000564105 NUDT3O95989 172 aa13.33□□□□□ -0.28
CTU2-204ENST00000564105 LINC00694P0DN24 101 aa13.33□□□□□ -0.28
CTU2-204ENST00000564105 UBE2D3P61077 147 aa13.33□□□□□ -0.28
CTU2-204ENST00000564105 SUMO2P61956 95 aaKnown RBP13.33□□□□□ -0.28
CTU2-204ENST00000564105 UBE2D2P62837 147 aa13.33□□□□□ -0.28
CTU2-204ENST00000564105 C20orf78Q9BR46 151 aa13.33□□□□□ -0.28
CTU2-204ENST00000564105 TENM2Q9NT68 2774 aa13.33□□□□□ -0.28
CTU2-204ENST00000564105 STARD9Q9P2P6 4700 aa13.33□□□□□ -0.28
CTU2-204ENST00000564105 RYR2Q92736 4967 aa13.33□□□□□ -0.28
CTU2-204ENST00000564105 C15orf53Q8NAA6 179 aa13.32□□□□□ -0.28
CTU2-204ENST00000564105 KLK5Q9Y337 293 aaPredicted RBP13.32□□□□□ -0.28
CTU2-204ENST00000564105 POLR2KP53803 58 aaKnown RBP13.32□□□□□ -0.28
CTU2-204ENST00000564105 ZFAND6Q6FIF0 208 aa13.32□□□□□ -0.28
CTU2-204ENST00000564105 TMEM70Q9BUB7 260 aa13.32□□□□□ -0.28
CTU2-204ENST00000564105 MAP1LC3AQ9H492 121 aa13.32□□□□□ -0.28
CTU2-204ENST00000564105 LOC389332A0A1B0GUA5 103 aa13.31□□□□□ -0.28
CTU2-204ENST00000564105 CASC10Q5T4H9 136 aa13.31□□□□□ -0.28
CTU2-204ENST00000564105 ATP6V0E2Q8NHE4 81 aa13.31□□□□□ -0.28
CTU2-204ENST00000564105 SACSQ9NZJ4 4579 aa13.31□□□□□ -0.28
CTU2-204ENST00000564105 IGHV3-38A0A0C4DH36 116 aa13.3□□□□□ -0.28
CTU2-204ENST00000564105 PRSS47A8MTI9 375 aa13.29□□□□□ -0.28
CTU2-204ENST00000564105 NEGR1Q7Z3B1 354 aa13.29□□□□□ -0.28
CTU2-204ENST00000564105 SH2D6Q7Z4S9 175 aa13.29□□□□□ -0.28
CTU2-204ENST00000564105 DAZ4Q86SG3 579 aaKnown RBP13.29□□□□□ -0.28
CTU2-204ENST00000564105 C18orf32Q8TCD1 76 aa13.29□□□□□ -0.28
CTU2-204ENST00000564105 SMIM2Q9BVW6 85 aa13.29□□□□□ -0.28
CTU2-204ENST00000564105 DAZ3Q9NR90 486 aaKnown RBP13.29□□□□□ -0.28
CTU2-204ENST00000564105 C1orf196B1AJZ1 125 aa13.28□□□□□ -0.28
CTU2-204ENST00000564105 PMCHP20382 165 aa13.28□□□□□ -0.28
CTU2-204ENST00000564105 RPL32P62910 135 aaKnown RBP13.28□□□□□ -0.28
CTU2-204ENST00000564105 IQCJQ1A5X6 159 aa13.28□□□□□ -0.28
CTU2-204ENST00000564105 PLECQ15149 4684 aaKnown RBP13.28□□□□□ -0.28
CTU2-204ENST00000564105 TRBV27A0A0K0K1C4 114 aa13.28□□□□□ -0.28
CTU2-204ENST00000564105 I3L3M4 83 aa13.28□□□□□ -0.28
CTU2-204ENST00000564105 VCYO14598 125 aa13.28□□□□□ -0.28
CTU2-204ENST00000564105 LYSTQ99698 3801 aa13.28□□□□□ -0.28
CTU2-204ENST00000564105 DEFB104AQ8WTQ1 72 aa13.27□□□□□ -0.29
CTU2-204ENST00000564105 APLNQ9ULZ1 77 aa13.27□□□□□ -0.29
CTU2-204ENST00000564105 IFI27P40305 119 aaPredicted RBP13.26□□□□□ -0.29
CTU2-204ENST00000564105 Q8N8P6 123 aa13.26□□□□□ -0.29
CTU2-204ENST00000564105 PRSS3P2Q8NHM4 247 aa13.26□□□□□ -0.29
CTU2-204ENST00000564105 GTSF1LQ9H1H1 148 aa13.26□□□□□ -0.29
CTU2-204ENST00000564105 IGLV2-18A0A075B6J9 118 aa13.25□□□□□ -0.29
CTU2-204ENST00000564105 HIST1H2BKO60814 126 aa13.25□□□□□ -0.29
CTU2-204ENST00000564105 HIST1H2BJP06899 126 aa13.25□□□□□ -0.29
CTU2-204ENST00000564105 HIST1H2BOP23527 126 aa13.25□□□□□ -0.29
CTU2-204ENST00000564105 HIST1H2BBP33778 126 aa13.25□□□□□ -0.29
CTU2-204ENST00000564105 HIST1H2BDP58876 126 aa13.25□□□□□ -0.29
CTU2-204ENST00000564105 HIST1H2BCP62807 126 aa13.25□□□□□ -0.29
CTU2-204ENST00000564105 HIST2H2BEQ16778 126 aa13.25□□□□□ -0.29
CTU2-204ENST00000564105 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.25□□□□□ -0.29
CTU2-204ENST00000564105 HIST1H2BHQ93079 126 aa13.25□□□□□ -0.29
CTU2-204ENST00000564105 KIR2DL4Q99706 377 aa13.25□□□□□ -0.29
CTU2-204ENST00000564105 HIST1H2BNQ99877 126 aa13.25□□□□□ -0.29
CTU2-204ENST00000564105 HIST1H2BMQ99879 126 aa13.25□□□□□ -0.29
CTU2-204ENST00000564105 NXT2Q9NPJ8 142 aaKnown RBP13.25□□□□□ -0.29
CTU2-204ENST00000564105 TCTAP57738 103 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms