RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 TRBV6-5A0A0K0K1A5 114 aa7.35□□□□□ -1.23
USP3-219ENST00000561326 K7EMI3 77 aa7.35□□□□□ -1.23
USP3-219ENST00000561326 VCYO14598 125 aa7.35□□□□□ -1.23
USP3-219ENST00000561326 DAD1P61803 113 aa7.35□□□□□ -1.23
USP3-219ENST00000561326 SBSPONQ8IVN8 264 aa7.35□□□□□ -1.23
USP3-219ENST00000561326 HIST3H2BBQ8N257 126 aa7.35□□□□□ -1.23
USP3-219ENST00000561326 LINC00612Q8N6U2 182 aa7.35□□□□□ -1.23
USP3-219ENST00000561326 Q8N8P6 123 aa7.35□□□□□ -1.23
USP3-219ENST00000561326 ZNF479Q96JC4 524 aa7.35□□□□□ -1.23
USP3-219ENST00000561326 TNFRSF18Q9Y5U5 241 aa7.35□□□□□ -1.23
USP3-219ENST00000561326 TRBV10-1A0A0K0K1A3 114 aa7.34□□□□□ -1.23
USP3-219ENST00000561326 DEFB4AO15263 64 aa7.34□□□□□ -1.23
USP3-219ENST00000561326 TCAPO15273 167 aa7.34□□□□□ -1.23
USP3-219ENST00000561326 GAS8-AS1O95177 125 aa7.34□□□□□ -1.23
USP3-219ENST00000561326 G0S2P27469 103 aa7.34□□□□□ -1.23
USP3-219ENST00000561326 RPL32P62910 135 aaKnown RBP7.34□□□□□ -1.23
USP3-219ENST00000561326 PDZD11Q5EBL8 140 aa7.34□□□□□ -1.23
USP3-219ENST00000561326 MRAPQ8TCY5 172 aa7.34□□□□□ -1.23
USP3-219ENST00000561326 RPL39LQ96EH5 51 aaKnown RBP7.34□□□□□ -1.23
USP3-219ENST00000561326 PACRGQ96M98 296 aaPredicted RBP7.34□□□□□ -1.23
USP3-219ENST00000561326 KIR2DL4Q99706 377 aa7.34□□□□□ -1.23
USP3-219ENST00000561326 ZMAT4Q9H898 229 aa7.34□□□□□ -1.23
USP3-219ENST00000561326 NUPR1O60356 82 aa7.33□□□□□ -1.24
USP3-219ENST00000561326 AMTP48728 403 aa7.33□□□□□ -1.24
USP3-219ENST00000561326 PRADC1Q9BSG0 188 aa7.33□□□□□ -1.24
USP3-219ENST00000561326 SMIM2Q9BVW6 85 aa7.33□□□□□ -1.24
USP3-219ENST00000561326 C11orf68Q9H3H3 251 aaKnown RBP7.33□□□□□ -1.24
USP3-219ENST00000561326 LOC105371267A0A1B0GV96 52 aa7.32□□□□□ -1.24
USP3-219ENST00000561326 TRBV6-4A0A1B0GX49 114 aa7.32□□□□□ -1.24
USP3-219ENST00000561326 SDHAF1A6NFY7 115 aa7.32□□□□□ -1.24
USP3-219ENST00000561326 LINC01546A6NGU7 62 aa7.32□□□□□ -1.24
USP3-219ENST00000561326 ATP5G1P05496 136 aa7.32□□□□□ -1.24
USP3-219ENST00000561326 FABP4P15090 132 aa7.32□□□□□ -1.24
USP3-219ENST00000561326 POLR2KP53803 58 aaKnown RBP7.32□□□□□ -1.24
USP3-219ENST00000561326 RPL36AP83881 106 aaKnown RBP7.32□□□□□ -1.24
USP3-219ENST00000561326 LAGE3Q14657 143 aa7.32□□□□□ -1.24
USP3-219ENST00000561326 ORMDL2Q53FV1 153 aa7.32□□□□□ -1.24
USP3-219ENST00000561326 RPL36ALQ969Q0 106 aaKnown RBP7.32□□□□□ -1.24
USP3-219ENST00000561326 TM2D3Q9BRN9 247 aa7.32□□□□□ -1.24
USP3-219ENST00000561326 TMEM70Q9BUB7 260 aa7.32□□□□□ -1.24
USP3-219ENST00000561326 RETNQ9HD89 108 aa7.32□□□□□ -1.24
USP3-219ENST00000561326 HHLA3Q9XRX5 114 aa7.32□□□□□ -1.24
USP3-219ENST00000561326 TRBV7-3A0A075B6L6 115 aa7.31□□□□□ -1.24
USP3-219ENST00000561326 TRBV27A0A0K0K1C4 114 aa7.31□□□□□ -1.24
USP3-219ENST00000561326 LINC01549A6NIU2 74 aa7.31□□□□□ -1.24
USP3-219ENST00000561326 I3L3M4 83 aa7.31□□□□□ -1.24
USP3-219ENST00000561326 K7EQD1 137 aa7.31□□□□□ -1.24
USP3-219ENST00000561326 LINC00310P59036 64 aa7.31□□□□□ -1.24
USP3-219ENST00000561326 FHL2Q14192 279 aa7.31□□□□□ -1.24
USP3-219ENST00000561326 RHOHQ15669 191 aa7.31□□□□□ -1.24
USP3-219ENST00000561326 Q6ZSN1 163 aa7.31□□□□□ -1.24
USP3-219ENST00000561326 FAM19A2Q8N3H0 131 aa7.31□□□□□ -1.24
USP3-219ENST00000561326 SLC25A29Q8N8R3 303 aa7.31□□□□□ -1.24
USP3-219ENST00000561326 URB1-AS1Q96HZ7 61 aa7.31□□□□□ -1.24
USP3-219ENST00000561326 HIST1H2BLQ99880 126 aa7.31□□□□□ -1.24
USP3-219ENST00000561326 PRO0255Q9UI72 69 aa7.31□□□□□ -1.24
USP3-219ENST00000561326 IGLV2-18A0A075B6J9 118 aa7.3□□□□□ -1.24
USP3-219ENST00000561326 P0DMU3 169 aa7.3□□□□□ -1.24
USP3-219ENST00000561326 FAM231AP0DMU4 169 aa7.3□□□□□ -1.24
USP3-219ENST00000561326 FAM231CP0DMU5 169 aa7.3□□□□□ -1.24
USP3-219ENST00000561326 FCER1GP30273 86 aa7.3□□□□□ -1.24
USP3-219ENST00000561326 AKR1D1P51857 326 aa7.3□□□□□ -1.24
USP3-219ENST00000561326 NEXN-AS1Q8NBZ9 246 aa7.3□□□□□ -1.24
USP3-219ENST00000561326 ZNRF2Q8NHG8 242 aa7.3□□□□□ -1.24
USP3-219ENST00000561326 B9D2Q9BPU9 175 aa7.3□□□□□ -1.24
USP3-219ENST00000561326 A0A0J9YWU9 116 aa7.29□□□□□ -1.24
USP3-219ENST00000561326 NUDT3O95989 172 aa7.29□□□□□ -1.24
USP3-219ENST00000561326 HBDP02042 147 aa7.29□□□□□ -1.24
USP3-219ENST00000561326 DAZ4Q86SG3 579 aaKnown RBP7.29□□□□□ -1.24
USP3-219ENST00000561326 OR10D4PQ8NGN7 298 aa7.29□□□□□ -1.24
USP3-219ENST00000561326 DAZ3Q9NR90 486 aaKnown RBP7.29□□□□□ -1.24
USP3-219ENST00000561326 HSPB8Q9UJY1 196 aa7.29□□□□□ -1.24
USP3-219ENST00000561326 CELA1Q9UNI1 258 aa7.29□□□□□ -1.24
USP3-219ENST00000561326 IGHV1-24A0A0C4DH33 117 aa7.28□□□□□ -1.24
USP3-219ENST00000561326 IFITM10A6NMD0 228 aa7.28□□□□□ -1.24
USP3-219ENST00000561326 F5H768 121 aa7.28□□□□□ -1.24
USP3-219ENST00000561326 PAX4O43316 350 aa7.28□□□□□ -1.24
USP3-219ENST00000561326 LEPROTL1O95214 131 aa7.28□□□□□ -1.24
USP3-219ENST00000561326 NHLRC4P0CG21 123 aaPredicted RBP7.28□□□□□ -1.24
USP3-219ENST00000561326 CRYBA4P53673 196 aa7.28□□□□□ -1.24
USP3-219ENST00000561326 C11orf45Q8TAV5 145 aa7.28□□□□□ -1.24
USP3-219ENST00000561326 DNHD1Q96M86 4753 aa7.27□□□□□ -1.25
USP3-219ENST00000561326 HTN3P15516 51 aa7.27□□□□□ -1.25
USP3-219ENST00000561326 BTF3P20290 206 aaKnown RBP7.27□□□□□ -1.25
USP3-219ENST00000561326 COTL1Q14019 142 aa7.27□□□□□ -1.25
USP3-219ENST00000561326 PMCHL1Q16048 86 aa7.27□□□□□ -1.25
USP3-219ENST00000561326 TMEM97Q5BJF2 176 aa7.27□□□□□ -1.25
USP3-219ENST00000561326 FBN3Q75N90 2809 aa7.26□□□□□ -1.25
USP3-219ENST00000561326 GAGE12JA6NER3 117 aa7.26□□□□□ -1.25
USP3-219ENST00000561326 ATP5LO75964 103 aa7.26□□□□□ -1.25
USP3-219ENST00000561326 UBE2D3P61077 147 aa7.26□□□□□ -1.25
USP3-219ENST00000561326 UBE2D2P62837 147 aa7.26□□□□□ -1.25
USP3-219ENST00000561326 GAGE1Q13065 139 aa7.26□□□□□ -1.25
USP3-219ENST00000561326 GAGE4Q13068 117 aa7.26□□□□□ -1.25
USP3-219ENST00000561326 GAGE5Q13069 117 aa7.26□□□□□ -1.25
USP3-219ENST00000561326 C12orf74Q32Q52 190 aa7.26□□□□□ -1.25
USP3-219ENST00000561326 GAGE13Q4V321 117 aa7.26□□□□□ -1.25
USP3-219ENST00000561326 NEGR1Q7Z3B1 354 aa7.26□□□□□ -1.25
USP3-219ENST00000561326 SH2D6Q7Z4S9 175 aa7.26□□□□□ -1.25
USP3-219ENST00000561326 MAP1LC3CQ9BXW4 147 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms