RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 HSBP1O75506 76 aa6.13□□□□□ -1.43
TRAF3-209ENST00000560463 GAS8-AS1O95177 125 aa6.13□□□□□ -1.43
TRAF3-209ENST00000560463 GATA1P15976 413 aaPredicted RBP6.13□□□□□ -1.43
TRAF3-209ENST00000560463 IFI27P40305 119 aaPredicted RBP6.13□□□□□ -1.43
TRAF3-209ENST00000560463 FAM222AQ5U5X8 452 aa6.13□□□□□ -1.43
TRAF3-209ENST00000560463 FA2HQ7L5A8 372 aa6.13□□□□□ -1.43
TRAF3-209ENST00000560463 SBSPONQ8IVN8 264 aa6.13□□□□□ -1.43
TRAF3-209ENST00000560463 Q8N8P6 123 aa6.13□□□□□ -1.43
TRAF3-209ENST00000560463 TMEM18Q96B42 140 aa6.13□□□□□ -1.43
TRAF3-209ENST00000560463 RPL39LQ96EH5 51 aaKnown RBP6.13□□□□□ -1.43
TRAF3-209ENST00000560463 ZNF479Q96JC4 524 aa6.13□□□□□ -1.43
TRAF3-209ENST00000560463 TM2D3Q9BRN9 247 aa6.13□□□□□ -1.43
TRAF3-209ENST00000560463 AP5S1Q9NUS5 200 aa6.13□□□□□ -1.43
TRAF3-209ENST00000560463 HUWE1Q7Z6Z7 4374 aaKnown RBP6.13□□□□□ -1.43
TRAF3-209ENST00000560463 DNAH9Q9NYC9 4486 aa6.13□□□□□ -1.43
TRAF3-209ENST00000560463 LOC389332A0A1B0GUA5 103 aa6.12□□□□□ -1.43
TRAF3-209ENST00000560463 LOC105371267A0A1B0GV96 52 aa6.12□□□□□ -1.43
TRAF3-209ENST00000560463 TRBV6-4A0A1B0GX49 114 aa6.12□□□□□ -1.43
TRAF3-209ENST00000560463 VCYO14598 125 aa6.12□□□□□ -1.43
TRAF3-209ENST00000560463 PRB2P02812 416 aaPredicted RBP6.12□□□□□ -1.43
TRAF3-209ENST00000560463 POLR2KP53803 58 aaKnown RBP6.12□□□□□ -1.43
TRAF3-209ENST00000560463 LINC00310P59036 64 aa6.12□□□□□ -1.43
TRAF3-209ENST00000560463 DAD1P61803 113 aa6.12□□□□□ -1.43
TRAF3-209ENST00000560463 RNASEKQ6P5S7 137 aaKnown RBP6.12□□□□□ -1.43
TRAF3-209ENST00000560463 URB1-AS1Q96HZ7 61 aa6.12□□□□□ -1.43
TRAF3-209ENST00000560463 SMIM2Q9BVW6 85 aa6.12□□□□□ -1.43
TRAF3-209ENST00000560463 ZMAT4Q9H898 229 aa6.12□□□□□ -1.43
TRAF3-209ENST00000560463 COL7A1Q02388 2944 aa6.12□□□□□ -1.43
TRAF3-209ENST00000560463 IGLV2-18A0A075B6J9 118 aa6.11□□□□□ -1.43
TRAF3-209ENST00000560463 IGHV3-73A0A0B4J1V6 119 aa6.11□□□□□ -1.43
TRAF3-209ENST00000560463 TRGV4A0A0C4DH28 118 aa6.11□□□□□ -1.43
TRAF3-209ENST00000560463 TRBV27A0A0K0K1C4 114 aa6.11□□□□□ -1.43
TRAF3-209ENST00000560463 SDHAF1A6NFY7 115 aa6.11□□□□□ -1.43
TRAF3-209ENST00000560463 K7EQD1 137 aa6.11□□□□□ -1.43
TRAF3-209ENST00000560463 NUPR1O60356 82 aa6.11□□□□□ -1.43
TRAF3-209ENST00000560463 DEFB130BP0DP73 79 aa6.11□□□□□ -1.43
TRAF3-209ENST00000560463 DEFB130AP0DP74 79 aa6.11□□□□□ -1.43
TRAF3-209ENST00000560463 G0S2P27469 103 aa6.11□□□□□ -1.43
TRAF3-209ENST00000560463 ORMDL2Q53FV1 153 aa6.11□□□□□ -1.43
TRAF3-209ENST00000560463 MRAPQ8TCY5 172 aa6.11□□□□□ -1.43
TRAF3-209ENST00000560463 KIR2DL4Q99706 377 aa6.11□□□□□ -1.43
TRAF3-209ENST00000560463 TMEM70Q9BUB7 260 aa6.11□□□□□ -1.43
TRAF3-209ENST00000560463 TNFRSF18Q9Y5U5 241 aa6.11□□□□□ -1.43
TRAF3-209ENST00000560463 LINC01549A6NIU2 74 aa6.1□□□□□ -1.43
TRAF3-209ENST00000560463 ATP5G1P05496 136 aa6.1□□□□□ -1.43
TRAF3-209ENST00000560463 FABP4P15090 132 aa6.1□□□□□ -1.43
TRAF3-209ENST00000560463 AMTP48728 403 aa6.1□□□□□ -1.43
TRAF3-209ENST00000560463 RPL36AP83881 106 aaKnown RBP6.1□□□□□ -1.43
TRAF3-209ENST00000560463 FHL2Q14192 279 aa6.1□□□□□ -1.43
TRAF3-209ENST00000560463 LAGE3Q14657 143 aa6.1□□□□□ -1.43
TRAF3-209ENST00000560463 RHOHQ15669 191 aa6.1□□□□□ -1.43
TRAF3-209ENST00000560463 PDZD11Q5EBL8 140 aa6.1□□□□□ -1.43
TRAF3-209ENST00000560463 Q6ZSN1 163 aa6.1□□□□□ -1.43
TRAF3-209ENST00000560463 SLC25A29Q8N8R3 303 aa6.1□□□□□ -1.43
TRAF3-209ENST00000560463 RPL36ALQ969Q0 106 aaKnown RBP6.1□□□□□ -1.43
TRAF3-209ENST00000560463 HIST1H2BLQ99880 126 aa6.1□□□□□ -1.43
TRAF3-209ENST00000560463 B9D2Q9BPU9 175 aa6.1□□□□□ -1.43
TRAF3-209ENST00000560463 RETNQ9HD89 108 aa6.1□□□□□ -1.43
TRAF3-209ENST00000560463 TRBV7-3A0A075B6L6 115 aa6.09□□□□□ -1.43
TRAF3-209ENST00000560463 I3L3M4 83 aa6.09□□□□□ -1.43
TRAF3-209ENST00000560463 DEFB4AO15263 64 aa6.09□□□□□ -1.43
TRAF3-209ENST00000560463 NEXN-AS1Q8NBZ9 246 aa6.09□□□□□ -1.43
TRAF3-209ENST00000560463 PRADC1Q9BSG0 188 aa6.09□□□□□ -1.43
TRAF3-209ENST00000560463 PRO0255Q9UI72 69 aa6.09□□□□□ -1.43
TRAF3-209ENST00000560463 CELA1Q9UNI1 258 aa6.09□□□□□ -1.43
TRAF3-209ENST00000560463 HHLA3Q9XRX5 114 aa6.09□□□□□ -1.43
TRAF3-209ENST00000560463 IGHV1-24A0A0C4DH33 117 aa6.08□□□□□ -1.44
TRAF3-209ENST00000560463 IFITM10A6NMD0 228 aa6.08□□□□□ -1.44
TRAF3-209ENST00000560463 HBDP02042 147 aa6.08□□□□□ -1.44
TRAF3-209ENST00000560463 FCER1GP30273 86 aa6.08□□□□□ -1.44
TRAF3-209ENST00000560463 DAZ4Q86SG3 579 aaKnown RBP6.08□□□□□ -1.44
TRAF3-209ENST00000560463 FAM19A2Q8N3H0 131 aa6.08□□□□□ -1.44
TRAF3-209ENST00000560463 DAZ3Q9NR90 486 aaKnown RBP6.08□□□□□ -1.44
TRAF3-209ENST00000560463 A0A0J9YWU9 116 aa6.07□□□□□ -1.44
TRAF3-209ENST00000560463 LEPROTL1O95214 131 aa6.07□□□□□ -1.44
TRAF3-209ENST00000560463 NHLRC4P0CG21 123 aaPredicted RBP6.07□□□□□ -1.44
TRAF3-209ENST00000560463 P0DMU3 169 aa6.07□□□□□ -1.44
TRAF3-209ENST00000560463 FAM231AP0DMU4 169 aa6.07□□□□□ -1.44
TRAF3-209ENST00000560463 FAM231CP0DMU5 169 aa6.07□□□□□ -1.44
TRAF3-209ENST00000560463 CRYBA4P53673 196 aa6.07□□□□□ -1.44
TRAF3-209ENST00000560463 ZNRF2Q8NHG8 242 aa6.07□□□□□ -1.44
TRAF3-209ENST00000560463 HSPB8Q9UJY1 196 aa6.07□□□□□ -1.44
TRAF3-209ENST00000560463 DNHD1Q96M86 4753 aa6.06□□□□□ -1.44
TRAF3-209ENST00000560463 A0A096LNJ9 63 aa6.06□□□□□ -1.44
TRAF3-209ENST00000560463 PAX4O43316 350 aa6.06□□□□□ -1.44
TRAF3-209ENST00000560463 NUDT3O95989 172 aa6.06□□□□□ -1.44
TRAF3-209ENST00000560463 AKR1D1P51857 326 aa6.06□□□□□ -1.44
TRAF3-209ENST00000560463 UBE2D3P61077 147 aa6.06□□□□□ -1.44
TRAF3-209ENST00000560463 UBE2D2P62837 147 aa6.06□□□□□ -1.44
TRAF3-209ENST00000560463 C12orf74Q32Q52 190 aa6.06□□□□□ -1.44
TRAF3-209ENST00000560463 TMEM97Q5BJF2 176 aa6.06□□□□□ -1.44
TRAF3-209ENST00000560463 OR10D4PQ8NGN7 298 aa6.06□□□□□ -1.44
TRAF3-209ENST00000560463 C11orf45Q8TAV5 145 aa6.06□□□□□ -1.44
TRAF3-209ENST00000560463 PRKDCP78527 4128 aaKnown RBP6.06□□□□□ -1.44
TRAF3-209ENST00000560463 H3BNG1 76 aa6.05□□□□□ -1.44
TRAF3-209ENST00000560463 TSHBP01222 138 aa6.05□□□□□ -1.44
TRAF3-209ENST00000560463 LINC00694P0DN24 101 aa6.05□□□□□ -1.44
TRAF3-209ENST00000560463 BTF3P20290 206 aaKnown RBP6.05□□□□□ -1.44
TRAF3-209ENST00000560463 COTL1Q14019 142 aa6.05□□□□□ -1.44
TRAF3-209ENST00000560463 PMCHL1Q16048 86 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms