RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 TRGC1P0CF51 173 aa7.76□□□□□ -1.17
SNX1-204ENST00000559061 C10orf91Q5T1B1 145 aa7.76□□□□□ -1.17
SNX1-204ENST00000559061 GATD1Q8NB37 220 aa7.76□□□□□ -1.17
SNX1-204ENST00000559061 GTSF1LQ9H1H1 148 aa7.76□□□□□ -1.17
SNX1-204ENST00000559061 DYNC1H1Q14204 4646 aaKnown RBP7.75□□□□□ -1.17
SNX1-204ENST00000559061 TRBV7-3A0A075B6L6 115 aa7.75□□□□□ -1.17
SNX1-204ENST00000559061 IGHV3-38A0A0C4DH36 116 aa7.75□□□□□ -1.17
SNX1-204ENST00000559061 A0A1B0GUT8 65 aa7.75□□□□□ -1.17
SNX1-204ENST00000559061 A0A1B0GXF2 115 aa7.75□□□□□ -1.17
SNX1-204ENST00000559061 SIVA1O15304 175 aa7.75□□□□□ -1.17
SNX1-204ENST00000559061 DNAH10OSP0CZ25 163 aa7.75□□□□□ -1.17
SNX1-204ENST00000559061 LELP1Q5T871 98 aa7.75□□□□□ -1.17
SNX1-204ENST00000559061 NTM-AS1Q6ZSK4 140 aa7.75□□□□□ -1.17
SNX1-204ENST00000559061 SH2D6Q7Z4S9 175 aa7.75□□□□□ -1.17
SNX1-204ENST00000559061 F5H697 171 aa7.74□□□□□ -1.17
SNX1-204ENST00000559061 PNRC1Q12796 327 aaPredicted RBP7.74□□□□□ -1.17
SNX1-204ENST00000559061 Q6ZRN7 208 aaPredicted RBP7.74□□□□□ -1.17
SNX1-204ENST00000559061 RPL39LQ96EH5 51 aaKnown RBP7.74□□□□□ -1.17
SNX1-204ENST00000559061 NAT8BQ9UHF3 227 aa7.74□□□□□ -1.17
SNX1-204ENST00000559061 TNFRSF18Q9Y5U5 241 aa7.74□□□□□ -1.17
SNX1-204ENST00000559061 PKHD1P08F94 4074 aa7.73□□□□□ -1.17
SNX1-204ENST00000559061 SMIM17P0DL12 118 aa7.73□□□□□ -1.17
SNX1-204ENST00000559061 RPS10P46783 165 aaKnown RBP7.73□□□□□ -1.17
SNX1-204ENST00000559061 RPL36AP83881 106 aaKnown RBP7.73□□□□□ -1.17
SNX1-204ENST00000559061 AMN1Q8IY45 258 aa7.73□□□□□ -1.17
SNX1-204ENST00000559061 RPL36ALQ969Q0 106 aaKnown RBP7.73□□□□□ -1.17
SNX1-204ENST00000559061 SEC11CQ9BY50 192 aa7.73□□□□□ -1.17
SNX1-204ENST00000559061 TMEM191AQ9H0A3 160 aa7.73□□□□□ -1.17
SNX1-204ENST00000559061 BIRC6Q9NR09 4857 aa7.73□□□□□ -1.17
SNX1-204ENST00000559061 A0A1B0GVY2 172 aa7.72□□□□□ -1.17
SNX1-204ENST00000559061 F8W036 122 aa7.72□□□□□ -1.17
SNX1-204ENST00000559061 RAB4AP20338 218 aa7.72□□□□□ -1.17
SNX1-204ENST00000559061 LINC01556Q5JQF7 62 aa7.72□□□□□ -1.17
SNX1-204ENST00000559061 RASL11AQ6T310 242 aa7.72□□□□□ -1.17
SNX1-204ENST00000559061 CARHSP1Q9Y2V2 147 aaKnown RBP7.72□□□□□ -1.17
SNX1-204ENST00000559061 MRPL54Q6P161 138 aaKnown RBP7.71□□□□□ -1.18
SNX1-204ENST00000559061 DEFB104AQ8WTQ1 72 aa7.71□□□□□ -1.18
SNX1-204ENST00000559061 DNAH5Q8TE73 4624 aa7.71□□□□□ -1.18
SNX1-204ENST00000559061 SMKR1H3BMG3 65 aa7.7□□□□□ -1.18
SNX1-204ENST00000559061 NCR2O95944 276 aa7.7□□□□□ -1.18
SNX1-204ENST00000559061 RIGQ13278 110 aa7.7□□□□□ -1.18
SNX1-204ENST00000559061 OR10J3Q5JRS4 329 aa7.7□□□□□ -1.18
SNX1-204ENST00000559061 C6orf223Q8N319 242 aa7.7□□□□□ -1.18
SNX1-204ENST00000559061 NRACQ8N912 160 aa7.7□□□□□ -1.18
SNX1-204ENST00000559061 DNAJC30Q96LL9 226 aa7.7□□□□□ -1.18
SNX1-204ENST00000559061 NIT2Q9NQR4 276 aa7.7□□□□□ -1.18
SNX1-204ENST00000559061 TRBV6-8A0A0A6YYG3 113 aa7.69□□□□□ -1.18
SNX1-204ENST00000559061 PPP1R2P9O14990 202 aa7.69□□□□□ -1.18
SNX1-204ENST00000559061 IGHV3-30P01768 117 aa7.69□□□□□ -1.18
SNX1-204ENST00000559061 IGHV3-33P01772 117 aa7.69□□□□□ -1.18
SNX1-204ENST00000559061 MT-ND4LP03901 98 aa7.69□□□□□ -1.18
SNX1-204ENST00000559061 IGHV3-30-3P0DP02 117 aa7.69□□□□□ -1.18
SNX1-204ENST00000559061 IGHV3-30-5P0DP03 117 aa7.69□□□□□ -1.18
SNX1-204ENST00000559061 TNP2Q05952 138 aa7.69□□□□□ -1.18
SNX1-204ENST00000559061 MRPL51Q4U2R6 128 aaKnown RBP7.69□□□□□ -1.18
SNX1-204ENST00000559061 TTC32Q5I0X7 151 aa7.69□□□□□ -1.18
SNX1-204ENST00000559061 C1orf134Q5TEV5 83 aa7.69□□□□□ -1.18
SNX1-204ENST00000559061 NIT1Q86X76 327 aa7.69□□□□□ -1.18
SNX1-204ENST00000559061 BORCS7Q96B45 105 aa7.69□□□□□ -1.18
SNX1-204ENST00000559061 ANAPC16Q96DE5 110 aa7.69□□□□□ -1.18
SNX1-204ENST00000559061 A0A087WWC5 75 aa7.68□□□□□ -1.18
SNX1-204ENST00000559061 TRAV8-6A0A0B4J262 113 aa7.68□□□□□ -1.18
SNX1-204ENST00000559061 TRBV6-5A0A0K0K1A5 114 aa7.68□□□□□ -1.18
SNX1-204ENST00000559061 H7C1H1 209 aa7.68□□□□□ -1.18
SNX1-204ENST00000559061 CAMPP49913 170 aa7.68□□□□□ -1.18
SNX1-204ENST00000559061 FAM104BQ5XKR9 115 aa7.68□□□□□ -1.18
SNX1-204ENST00000559061 DAZ4Q86SG3 579 aaKnown RBP7.68□□□□□ -1.18
SNX1-204ENST00000559061 DAZ3Q9NR90 486 aaKnown RBP7.68□□□□□ -1.18
SNX1-204ENST00000559061 C7orf77A4D0Y5 90 aa7.67□□□□□ -1.18
SNX1-204ENST00000559061 HBBP68871 147 aa7.67□□□□□ -1.18
SNX1-204ENST00000559061 IQCJQ1A5X6 159 aa7.67□□□□□ -1.18
SNX1-204ENST00000559061 CLRN3Q8NCR9 226 aa7.67□□□□□ -1.18
SNX1-204ENST00000559061 FRZBQ92765 325 aa7.67□□□□□ -1.18
SNX1-204ENST00000559061 MRAP2Q96G30 205 aa7.67□□□□□ -1.18
SNX1-204ENST00000559061 PRSS29PA6NIE9 313 aa7.66□□□□□ -1.18
SNX1-204ENST00000559061 IBA57-AS1B1ANH7 110 aa7.66□□□□□ -1.18
SNX1-204ENST00000559061 POLR2KP53803 58 aaKnown RBP7.66□□□□□ -1.18
SNX1-204ENST00000559061 MPV17L2Q567V2 206 aa7.66□□□□□ -1.18
SNX1-204ENST00000559061 SMIM15Q7Z3B0 74 aa7.66□□□□□ -1.18
SNX1-204ENST00000559061 ATP5L2Q7Z4Y8 100 aa7.66□□□□□ -1.18
SNX1-204ENST00000559061 SLC7A5P1Q8MH63 180 aa7.66□□□□□ -1.18
SNX1-204ENST00000559061 A0A1B0GW15 77 aa7.65□□□□□ -1.18
SNX1-204ENST00000559061 SDHAF1A6NFY7 115 aa7.65□□□□□ -1.18
SNX1-204ENST00000559061 TSHBP01222 138 aa7.65□□□□□ -1.18
SNX1-204ENST00000559061 LINC00336Q6ZUF6 198 aa7.65□□□□□ -1.18
SNX1-204ENST00000559061 IMMP2LQ96T52 175 aa7.65□□□□□ -1.18
SNX1-204ENST00000559061 TMEM70Q9BUB7 260 aa7.65□□□□□ -1.18
SNX1-204ENST00000559061 CTDSP1Q9GZU7 261 aa7.65□□□□□ -1.18
SNX1-204ENST00000559061 LRP1BQ9NZR2 4599 aa7.64□□□□□ -1.19
SNX1-204ENST00000559061 BTF3P20290 206 aaKnown RBP7.64□□□□□ -1.19
SNX1-204ENST00000559061 LCE2AQ5TA79 106 aaPredicted RBP7.64□□□□□ -1.19
SNX1-204ENST00000559061 ATRAIDQ6UW56 229 aa7.64□□□□□ -1.19
SNX1-204ENST00000559061 Q8N976 141 aa7.64□□□□□ -1.19
SNX1-204ENST00000559061 CHCHD7Q9BUK0 85 aa7.64□□□□□ -1.19
SNX1-204ENST00000559061 IGHV1-24A0A0C4DH33 117 aa7.63□□□□□ -1.19
SNX1-204ENST00000559061 TRBV27A0A0K0K1C4 114 aa7.63□□□□□ -1.19
SNX1-204ENST00000559061 D6R8Y8 96 aa7.63□□□□□ -1.19
SNX1-204ENST00000559061 K7EP13 123 aa7.63□□□□□ -1.19
SNX1-204ENST00000559061 NPYP01303 97 aa7.63□□□□□ -1.19
SNX1-204ENST00000559061 GAGE6Q13070 117 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms