RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 LEPROTL1O95214 131 aa5.3□□□□□ -1.56
SPG11-204ENST00000557866 SMIM17P0DL12 118 aa5.3□□□□□ -1.56
SPG11-204ENST00000557866 NUTF2P61970 127 aaKnown RBP5.3□□□□□ -1.56
SPG11-204ENST00000557866 PIK3CD-AS1Q5SR53 167 aa5.3□□□□□ -1.56
SPG11-204ENST00000557866 ZNF705AQ6ZN79 300 aaPredicted RBP5.3□□□□□ -1.56
SPG11-204ENST00000557866 C20orf78Q9BR46 151 aa5.3□□□□□ -1.56
SPG11-204ENST00000557866 TMEM208Q9BTX3 173 aa5.3□□□□□ -1.56
SPG11-204ENST00000557866 MCRIP2Q9BUT9 160 aaKnown RBP5.3□□□□□ -1.56
SPG11-204ENST00000557866 NXT2Q9NPJ8 142 aaKnown RBP5.3□□□□□ -1.56
SPG11-204ENST00000557866 NOTCH3Q9UM47 2321 aa5.3□□□□□ -1.56
SPG11-204ENST00000557866 IGHV3-73A0A0B4J1V6 119 aa5.29□□□□□ -1.56
SPG11-204ENST00000557866 PLAC8L1A1L4L8 177 aa5.29□□□□□ -1.56
SPG11-204ENST00000557866 PCP4L1A6NKN8 68 aa5.29□□□□□ -1.56
SPG11-204ENST00000557866 TCAPO15273 167 aa5.29□□□□□ -1.56
SPG11-204ENST00000557866 RS1O15537 224 aa5.29□□□□□ -1.56
SPG11-204ENST00000557866 SUMO2P61956 95 aaKnown RBP5.29□□□□□ -1.56
SPG11-204ENST00000557866 FAM74A4Q5TZK3 123 aa5.29□□□□□ -1.56
SPG11-204ENST00000557866 CFAP126Q5VTH2 177 aa5.29□□□□□ -1.56
SPG11-204ENST00000557866 TEX43Q6ZNM6 134 aa5.29□□□□□ -1.56
SPG11-204ENST00000557866 NEGR1Q7Z3B1 354 aa5.29□□□□□ -1.56
SPG11-204ENST00000557866 GTSCR1Q86UQ5 136 aa5.29□□□□□ -1.56
SPG11-204ENST00000557866 ZNF664Q8N3J9 261 aa5.29□□□□□ -1.56
SPG11-204ENST00000557866 SPXQ9BT56 116 aa5.29□□□□□ -1.56
SPG11-204ENST00000557866 SMIM2Q9BVW6 85 aa5.29□□□□□ -1.56
SPG11-204ENST00000557866 CSTL1Q9H114 145 aa5.29□□□□□ -1.56
SPG11-204ENST00000557866 MRPL16Q9NX20 251 aaKnown RBP5.29□□□□□ -1.56
SPG11-204ENST00000557866 GOLT1BQ9Y3E0 138 aa5.29□□□□□ -1.56
SPG11-204ENST00000557866 TRBV6-5A0A0K0K1A5 114 aa5.28□□□□□ -1.56
SPG11-204ENST00000557866 A8MWV9 139 aa5.28□□□□□ -1.56
SPG11-204ENST00000557866 F5H697 171 aa5.28□□□□□ -1.56
SPG11-204ENST00000557866 SYS1-DBNDD2H3BUS1 97 aa5.28□□□□□ -1.56
SPG11-204ENST00000557866 HBDP02042 147 aa5.28□□□□□ -1.56
SPG11-204ENST00000557866 BTF3P20290 206 aaKnown RBP5.28□□□□□ -1.56
SPG11-204ENST00000557866 FCER1GP30273 86 aa5.28□□□□□ -1.56
SPG11-204ENST00000557866 POLR2KP53803 58 aaKnown RBP5.28□□□□□ -1.56
SPG11-204ENST00000557866 RPL32P62910 135 aaKnown RBP5.28□□□□□ -1.56
SPG11-204ENST00000557866 GAGE13Q4V321 117 aa5.28□□□□□ -1.56
SPG11-204ENST00000557866 C3orf56Q8N813 242 aa5.28□□□□□ -1.56
SPG11-204ENST00000557866 TMEM263Q8WUH6 116 aaKnown RBP5.28□□□□□ -1.56
SPG11-204ENST00000557866 TMEM158Q8WZ71 300 aa5.28□□□□□ -1.56
SPG11-204ENST00000557866 TMEM70Q9BUB7 260 aa5.28□□□□□ -1.56
SPG11-204ENST00000557866 EDA2RQ9HAV5 297 aa5.28□□□□□ -1.56
SPG11-204ENST00000557866 Q9UF83 564 aa5.28□□□□□ -1.56
SPG11-204ENST00000557866 HSPB8Q9UJY1 196 aa5.28□□□□□ -1.56
SPG11-204ENST00000557866 PPP1R17O96001 155 aa5.27□□□□□ -1.57
SPG11-204ENST00000557866 P0DMU3 169 aa5.27□□□□□ -1.57
SPG11-204ENST00000557866 FAM231AP0DMU4 169 aa5.27□□□□□ -1.57
SPG11-204ENST00000557866 FAM231CP0DMU5 169 aa5.27□□□□□ -1.57
SPG11-204ENST00000557866 KRTAP10-11P60412 298 aa5.27□□□□□ -1.57
SPG11-204ENST00000557866 DAZ2Q13117 558 aaKnown RBP5.27□□□□□ -1.57
SPG11-204ENST00000557866 LAGE3Q14657 143 aa5.27□□□□□ -1.57
SPG11-204ENST00000557866 ZNF56Q15929 161 aa5.27□□□□□ -1.57
SPG11-204ENST00000557866 C12orf54Q6X4T0 127 aa5.27□□□□□ -1.57
SPG11-204ENST00000557866 Q6ZTI0 123 aa5.27□□□□□ -1.57
SPG11-204ENST00000557866 OVOL2Q9BRP0 275 aa5.27□□□□□ -1.57
SPG11-204ENST00000557866 C1QTNF4Q9BXJ3 329 aa5.27□□□□□ -1.57
SPG11-204ENST00000557866 PRO1933Q9H354 126 aa5.27□□□□□ -1.57
SPG11-204ENST00000557866 ST20Q9HBF5 79 aa5.27□□□□□ -1.57
SPG11-204ENST00000557866 TRGV1A0A0A0MS02 117 aa5.26□□□□□ -1.57
SPG11-204ENST00000557866 RRN3P1Q2M238 152 aa5.26□□□□□ -1.57
SPG11-204ENST00000557866 PET117Q6UWS5 81 aa5.26□□□□□ -1.57
SPG11-204ENST00000557866 ATOH7Q8N100 152 aa5.26□□□□□ -1.57
SPG11-204ENST00000557866 DEFB104AQ8WTQ1 72 aa5.26□□□□□ -1.57
SPG11-204ENST00000557866 IFI27L1Q96BM0 104 aa5.26□□□□□ -1.57
SPG11-204ENST00000557866 C16orf74Q96GX8 76 aa5.26□□□□□ -1.57
SPG11-204ENST00000557866 NDUFAF3Q9BU61 184 aa5.26□□□□□ -1.57
SPG11-204ENST00000557866 MAP1LC3CQ9BXW4 147 aa5.26□□□□□ -1.57
SPG11-204ENST00000557866 NOP10Q9NPE3 64 aaKnown RBP5.26□□□□□ -1.57
SPG11-204ENST00000557866 KIR2DL5BA0A0G2JN68 375 aa5.25□□□□□ -1.57
SPG11-204ENST00000557866 KIR2DL5BA0A0G2JPC4 375 aa5.25□□□□□ -1.57
SPG11-204ENST00000557866 TRBV27A0A0K0K1C4 114 aa5.25□□□□□ -1.57
SPG11-204ENST00000557866 SDHAF1A6NFY7 115 aa5.25□□□□□ -1.57
SPG11-204ENST00000557866 VCYO14598 125 aa5.25□□□□□ -1.57
SPG11-204ENST00000557866 NUDT3O95989 172 aa5.25□□□□□ -1.57
SPG11-204ENST00000557866 IGHV3-53P01767 116 aa5.25□□□□□ -1.57
SPG11-204ENST00000557866 PKIAP61925 76 aa5.25□□□□□ -1.57
SPG11-204ENST00000557866 S100A12P80511 92 aa5.25□□□□□ -1.57
SPG11-204ENST00000557866 LGALS9BQ3B8N2 356 aa5.25□□□□□ -1.57
SPG11-204ENST00000557866 MAJINQ3KP22 176 aa5.25□□□□□ -1.57
SPG11-204ENST00000557866 LINC01545Q5VT33 79 aa5.25□□□□□ -1.57
SPG11-204ENST00000557866 KIR2DL5AQ8N109 375 aa5.25□□□□□ -1.57
SPG11-204ENST00000557866 KIR2DL5BQ8NHK3 375 aa5.25□□□□□ -1.57
SPG11-204ENST00000557866 ZNF479Q96JC4 524 aa5.25□□□□□ -1.57
SPG11-204ENST00000557866 C18orf15Q96N68 181 aa5.25□□□□□ -1.57
SPG11-204ENST00000557866 PMCHL2Q9BQD1 86 aa5.25□□□□□ -1.57
SPG11-204ENST00000557866 TRAV4A0A0B4J268 109 aa5.24□□□□□ -1.57
SPG11-204ENST00000557866 GAGE12BA1L429 117 aa5.24□□□□□ -1.57
SPG11-204ENST00000557866 LINC00587B1AMM8 73 aa5.24□□□□□ -1.57
SPG11-204ENST00000557866 H0Y8G0 127 aa5.24□□□□□ -1.57
SPG11-204ENST00000557866 K7EMI3 77 aa5.24□□□□□ -1.57
SPG11-204ENST00000557866 RHODO00212 210 aa5.24□□□□□ -1.57
SPG11-204ENST00000557866 GAGE7O76087 117 aa5.24□□□□□ -1.57
SPG11-204ENST00000557866 TSHBP01222 138 aa5.24□□□□□ -1.57
SPG11-204ENST00000557866 GAGE12FP0CL80 117 aa5.24□□□□□ -1.57
SPG11-204ENST00000557866 GAGE12GP0CL81 117 aa5.24□□□□□ -1.57
SPG11-204ENST00000557866 GAGE12IP0CL82 117 aa5.24□□□□□ -1.57
SPG11-204ENST00000557866 IGHV4-30-4P0DP06 118 aa5.24□□□□□ -1.57
SPG11-204ENST00000557866 EGFEM1PQ0D2K5 195 aa5.24□□□□□ -1.57
SPG11-204ENST00000557866 ORMDL2Q53FV1 153 aa5.24□□□□□ -1.57
SPG11-204ENST00000557866 ZFP2Q6ZN57 461 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms