RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 DKK2Q9UBU2 259 aa6.88□□□□□ -1.31
HNRNPC-220ENST00000555585 TRGV4A0A0C4DH28 118 aa6.87□□□□□ -1.31
HNRNPC-220ENST00000555585 M0QY20 66 aa6.87□□□□□ -1.31
HNRNPC-220ENST00000555585 NUPR1O60356 82 aa6.87□□□□□ -1.31
HNRNPC-220ENST00000555585 CIDEAO60543 219 aa6.87□□□□□ -1.31
HNRNPC-220ENST00000555585 LINC00614P0C842 121 aa6.87□□□□□ -1.31
HNRNPC-220ENST00000555585 SPART-AS1P0CW21 52 aa6.87□□□□□ -1.31
HNRNPC-220ENST00000555585 S100A2P29034 98 aa6.87□□□□□ -1.31
HNRNPC-220ENST00000555585 IFI27P40305 119 aaPredicted RBP6.87□□□□□ -1.31
HNRNPC-220ENST00000555585 DAD1P61803 113 aa6.87□□□□□ -1.31
HNRNPC-220ENST00000555585 Q6ZSN1 163 aa6.87□□□□□ -1.31
HNRNPC-220ENST00000555585 LINC00612Q8N6U2 182 aa6.87□□□□□ -1.31
HNRNPC-220ENST00000555585 NIT2Q9NQR4 276 aa6.87□□□□□ -1.31
HNRNPC-220ENST00000555585 CELA1Q9UNI1 258 aa6.87□□□□□ -1.31
HNRNPC-220ENST00000555585 TEX48A0A1B0GUV7 120 aa6.86□□□□□ -1.31
HNRNPC-220ENST00000555585 HSBP1O75506 76 aa6.86□□□□□ -1.31
HNRNPC-220ENST00000555585 P0DMU3 169 aa6.86□□□□□ -1.31
HNRNPC-220ENST00000555585 FAM231AP0DMU4 169 aa6.86□□□□□ -1.31
HNRNPC-220ENST00000555585 FAM231CP0DMU5 169 aa6.86□□□□□ -1.31
HNRNPC-220ENST00000555585 PMCHP20382 165 aa6.86□□□□□ -1.31
HNRNPC-220ENST00000555585 LINC00310P59036 64 aa6.86□□□□□ -1.31
HNRNPC-220ENST00000555585 SUMO2P61956 95 aaKnown RBP6.86□□□□□ -1.31
HNRNPC-220ENST00000555585 HIST3H2BBQ8N257 126 aa6.86□□□□□ -1.31
HNRNPC-220ENST00000555585 Q8N8P6 123 aa6.86□□□□□ -1.31
HNRNPC-220ENST00000555585 CHCHD1Q96BP2 118 aaKnown RBP6.86□□□□□ -1.31
HNRNPC-220ENST00000555585 C20orf78Q9BR46 151 aa6.86□□□□□ -1.31
HNRNPC-220ENST00000555585 TM2D3Q9BRN9 247 aa6.86□□□□□ -1.31
HNRNPC-220ENST00000555585 ZMAT4Q9H898 229 aa6.86□□□□□ -1.31
HNRNPC-220ENST00000555585 NXT2Q9NPJ8 142 aaKnown RBP6.86□□□□□ -1.31
HNRNPC-220ENST00000555585 PRSS47A8MTI9 375 aa6.85□□□□□ -1.31
HNRNPC-220ENST00000555585 K7EQD1 137 aa6.85□□□□□ -1.31
HNRNPC-220ENST00000555585 FHL2Q14192 279 aa6.85□□□□□ -1.31
HNRNPC-220ENST00000555585 URB1-AS1Q96HZ7 61 aa6.85□□□□□ -1.31
HNRNPC-220ENST00000555585 C18orf15Q96N68 181 aa6.85□□□□□ -1.31
HNRNPC-220ENST00000555585 SMIM2Q9BVW6 85 aa6.85□□□□□ -1.31
HNRNPC-220ENST00000555585 KRTAP4-8Q9BYQ9 185 aa6.85□□□□□ -1.31
HNRNPC-220ENST00000555585 C11orf68Q9H3H3 251 aaKnown RBP6.85□□□□□ -1.31
HNRNPC-220ENST00000555585 EDA2RQ9HAV5 297 aa6.85□□□□□ -1.31
HNRNPC-220ENST00000555585 TNFRSF18Q9Y5U5 241 aa6.85□□□□□ -1.31
HNRNPC-220ENST00000555585 A0A0J9YWU9 116 aa6.84□□□□□ -1.31
HNRNPC-220ENST00000555585 TRBV6-5A0A0K0K1A5 114 aa6.84□□□□□ -1.31
HNRNPC-220ENST00000555585 SDHAF1A6NFY7 115 aa6.84□□□□□ -1.31
HNRNPC-220ENST00000555585 ESDP10768 282 aa6.84□□□□□ -1.31
HNRNPC-220ENST00000555585 NEGR1Q7Z3B1 354 aa6.84□□□□□ -1.31
HNRNPC-220ENST00000555585 FAM19A2Q8N3H0 131 aa6.84□□□□□ -1.31
HNRNPC-220ENST00000555585 NEXN-AS1Q8NBZ9 246 aa6.84□□□□□ -1.31
HNRNPC-220ENST00000555585 TMEM18Q96B42 140 aa6.84□□□□□ -1.31
HNRNPC-220ENST00000555585 DNAJC30Q96LL9 226 aa6.84□□□□□ -1.31
HNRNPC-220ENST00000555585 AP5S1Q9NUS5 200 aa6.84□□□□□ -1.31
HNRNPC-220ENST00000555585 IGLV2-18A0A075B6J9 118 aa6.83□□□□□ -1.32
HNRNPC-220ENST00000555585 LOC105371267A0A1B0GV96 52 aa6.83□□□□□ -1.32
HNRNPC-220ENST00000555585 TRBV6-4A0A1B0GX49 114 aa6.83□□□□□ -1.32
HNRNPC-220ENST00000555585 VCYO14598 125 aa6.83□□□□□ -1.32
HNRNPC-220ENST00000555585 TCAPO15273 167 aa6.83□□□□□ -1.32
HNRNPC-220ENST00000555585 ATP5G1P05496 136 aa6.83□□□□□ -1.32
HNRNPC-220ENST00000555585 FABP4P15090 132 aa6.83□□□□□ -1.32
HNRNPC-220ENST00000555585 HTN3P15516 51 aa6.83□□□□□ -1.32
HNRNPC-220ENST00000555585 AMTP48728 403 aa6.83□□□□□ -1.32
HNRNPC-220ENST00000555585 POLR2KP53803 58 aaKnown RBP6.83□□□□□ -1.32
HNRNPC-220ENST00000555585 RPL36AP83881 106 aaKnown RBP6.83□□□□□ -1.32
HNRNPC-220ENST00000555585 PMCHL1Q16048 86 aa6.83□□□□□ -1.32
HNRNPC-220ENST00000555585 SLC25A29Q8N8R3 303 aa6.83□□□□□ -1.32
HNRNPC-220ENST00000555585 ZNRF2Q8NHG8 242 aa6.83□□□□□ -1.32
HNRNPC-220ENST00000555585 RPL36ALQ969Q0 106 aaKnown RBP6.83□□□□□ -1.32
HNRNPC-220ENST00000555585 B9D2Q9BPU9 175 aa6.83□□□□□ -1.32
HNRNPC-220ENST00000555585 PRADC1Q9BSG0 188 aa6.83□□□□□ -1.32
HNRNPC-220ENST00000555585 TMEM70Q9BUB7 260 aa6.83□□□□□ -1.32
HNRNPC-220ENST00000555585 HHLA3Q9XRX5 114 aa6.83□□□□□ -1.32
HNRNPC-220ENST00000555585 TRBV10-1A0A0K0K1A3 114 aa6.82□□□□□ -1.32
HNRNPC-220ENST00000555585 GAGE12JA6NER3 117 aa6.82□□□□□ -1.32
HNRNPC-220ENST00000555585 RPL32P62910 135 aaKnown RBP6.82□□□□□ -1.32
HNRNPC-220ENST00000555585 DEFA6Q01524 100 aa6.82□□□□□ -1.32
HNRNPC-220ENST00000555585 GAGE1Q13065 139 aa6.82□□□□□ -1.32
HNRNPC-220ENST00000555585 GAGE4Q13068 117 aa6.82□□□□□ -1.32
HNRNPC-220ENST00000555585 GAGE5Q13069 117 aa6.82□□□□□ -1.32
HNRNPC-220ENST00000555585 LAGE3Q14657 143 aa6.82□□□□□ -1.32
HNRNPC-220ENST00000555585 RHOHQ15669 191 aa6.82□□□□□ -1.32
HNRNPC-220ENST00000555585 GAGE13Q4V321 117 aa6.82□□□□□ -1.32
HNRNPC-220ENST00000555585 DEFB104AQ8WTQ1 72 aa6.82□□□□□ -1.32
HNRNPC-220ENST00000555585 KIR2DL4Q99706 377 aa6.82□□□□□ -1.32
HNRNPC-220ENST00000555585 Q9UF83 564 aa6.82□□□□□ -1.32
HNRNPC-220ENST00000555585 NBEAL2Q6ZNJ1 2754 aa6.82□□□□□ -1.32
HNRNPC-220ENST00000555585 TRBV7-3A0A075B6L6 115 aa6.81□□□□□ -1.32
HNRNPC-220ENST00000555585 IGHV1-24A0A0C4DH33 117 aa6.81□□□□□ -1.32
HNRNPC-220ENST00000555585 LOC100131303A0A0U1RQF7 123 aa6.81□□□□□ -1.32
HNRNPC-220ENST00000555585 IFITM10A6NMD0 228 aa6.81□□□□□ -1.32
HNRNPC-220ENST00000555585 F5H768 121 aa6.81□□□□□ -1.32
HNRNPC-220ENST00000555585 I3L3M4 83 aa6.81□□□□□ -1.32
HNRNPC-220ENST00000555585 FCER1GP30273 86 aa6.81□□□□□ -1.32
HNRNPC-220ENST00000555585 AKR1D1P51857 326 aa6.81□□□□□ -1.32
HNRNPC-220ENST00000555585 C12orf74Q32Q52 190 aa6.81□□□□□ -1.32
HNRNPC-220ENST00000555585 C11orf45Q8TAV5 145 aa6.81□□□□□ -1.32
HNRNPC-220ENST00000555585 PHLDA1Q8WV24 401 aaPredicted RBP6.81□□□□□ -1.32
HNRNPC-220ENST00000555585 HIST1H2BLQ99880 126 aa6.81□□□□□ -1.32
HNRNPC-220ENST00000555585 PRO0255Q9UI72 69 aa6.81□□□□□ -1.32
HNRNPC-220ENST00000555585 NOTCH1P46531 2555 aa6.81□□□□□ -1.32
HNRNPC-220ENST00000555585 IGHV3-38A0A0C4DH36 116 aa6.8□□□□□ -1.32
HNRNPC-220ENST00000555585 TRBV27A0A0K0K1C4 114 aa6.8□□□□□ -1.32
HNRNPC-220ENST00000555585 LINC01546A6NGU7 62 aa6.8□□□□□ -1.32
HNRNPC-220ENST00000555585 PAX4O43316 350 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms