RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 SNAPC5O75971 98 aa0.69□□□□□ -2.3
PRPF39-208ENST00000554785 NPPAP01160 153 aa0.69□□□□□ -2.3
PRPF39-208ENST00000554785 NQO2P16083 231 aa0.69□□□□□ -2.3
PRPF39-208ENST00000554785 ORM2P19652 201 aa0.69□□□□□ -2.3
PRPF39-208ENST00000554785 OR10J1P30954 320 aa0.69□□□□□ -2.3
PRPF39-208ENST00000554785 CRYBA4P53673 196 aa0.69□□□□□ -2.3
PRPF39-208ENST00000554785 OR10A3P58181 314 aa0.69□□□□□ -2.3
PRPF39-208ENST00000554785 ARPC4P59998 168 aa0.69□□□□□ -2.3
PRPF39-208ENST00000554785 CATR1Q13166 79 aa0.69□□□□□ -2.3
PRPF39-208ENST00000554785 ZNF846Q147U1 533 aa0.69□□□□□ -2.3
PRPF39-208ENST00000554785 HACD4Q5VWC8 232 aa0.69□□□□□ -2.3
PRPF39-208ENST00000554785 C12orf73Q69YU5 71 aa0.69□□□□□ -2.3
PRPF39-208ENST00000554785 LAIR2Q6ISS4 152 aa0.69□□□□□ -2.3
PRPF39-208ENST00000554785 AMTNQ6UX39 209 aa0.69□□□□□ -2.3
PRPF39-208ENST00000554785 AHSA2Q719I0 299 aa0.69□□□□□ -2.3
PRPF39-208ENST00000554785 MRPL52Q86TS9 123 aaKnown RBP0.69□□□□□ -2.3
PRPF39-208ENST00000554785 GATD1Q8NB37 220 aa0.69□□□□□ -2.3
PRPF39-208ENST00000554785 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.69□□□□□ -2.3
PRPF39-208ENST00000554785 OR1L8Q8NGR8 309 aa0.69□□□□□ -2.3
PRPF39-208ENST00000554785 RNASE11Q8TAA1 199 aaKnown RBP0.69□□□□□ -2.3
PRPF39-208ENST00000554785 SMIM19Q96E16 107 aa0.69□□□□□ -2.3
PRPF39-208ENST00000554785 TMEM56Q96MV1 263 aa0.69□□□□□ -2.3
PRPF39-208ENST00000554785 PDCD10Q9BUL8 212 aa0.69□□□□□ -2.3
PRPF39-208ENST00000554785 LPAR5Q9H1C0 372 aa0.69□□□□□ -2.3
PRPF39-208ENST00000554785 NDUFA4L2Q9NRX3 87 aa0.69□□□□□ -2.3
PRPF39-208ENST00000554785 BET1LQ9NYM9 111 aa0.69□□□□□ -2.3
PRPF39-208ENST00000554785 PRO0255Q9UI72 69 aa0.69□□□□□ -2.3
PRPF39-208ENST00000554785 POMPQ9Y244 141 aa0.69□□□□□ -2.3
PRPF39-208ENST00000554785 FCGBPQ9Y6R7 5405 aaPredicted RBP0.69□□□□□ -2.3
PRPF39-208ENST00000554785 TRBV24-1A0A075B6N3 115 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 IGKV1D-37A0A075B6S9 117 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 TRAV8-2A0A0B4J237 113 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 IGKV3OR2-268A0A0C4DH90 116 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 A0A1B0GU33 70 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 IBA57-AS1B1ANH7 110 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 TNFAIP8O95379 198 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 CDS2O95674 445 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 PPYP01298 95 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 IGLC1P0CG04 106 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 LIMS3P0CW19 117 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 LIMS4P0CW20 117 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 MYL12AP19105 171 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 LPAR6P43657 344 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 SERPINB10P48595 397 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 PSMB3P49720 205 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 UBE2D1P51668 147 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 ERHP84090 104 aaKnown RBP0.68□□□□□ -2.3
PRPF39-208ENST00000554785 COX6A2Q02221 97 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 FAM162BQ5T6X4 162 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 KRTAP13-1Q8IUC0 172 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 FER1L6-AS1Q8NA97 138 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 OR10P1Q8NGE3 313 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 ATP6V0E2Q8NHE4 81 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 Q8TAT8 98 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 Q8WTZ3 238 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 CYGBQ8WWM9 190 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 CMTM5Q96DZ9 223 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 LINC00526Q96FQ7 95 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 ATP6V1G3Q96LB4 118 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 HIGD2AQ9BW72 106 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 ATG5Q9H1Y0 275 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 TRAV2A0A0B4J234 112 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 CEBPZOSA8MTT3 80 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 FAM25EA8MYX2 175 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 TMEM262E9PQX1 116 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 TMEM250H0YL14 139 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 H7BYZ3 331 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 J3QRE1 110 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 M0R3E3 92 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 SLC17A3O00476 420 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 ITGB1BP1O14713 200 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 PMP2P02689 132 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 CRPP02741 224 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 C1QBP02746 253 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 ANGP03950 147 aaKnown RBP0.68□□□□□ -2.3
PRPF39-208ENST00000554785 OR5G3P0C626 314 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 RD3LP0DJH9 198 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 HIST1H1DP16402 221 aaKnown RBP0.68□□□□□ -2.3
PRPF39-208ENST00000554785 AKR1C4P17516 323 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 GADD45AP24522 165 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 RNASE4P34096 147 aaKnown RBP0.68□□□□□ -2.3
PRPF39-208ENST00000554785 HSPA13P48723 471 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 GNG2P59768 71 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 HSD17B12Q53GQ0 312 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 LINC01556Q5JQF7 62 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 FAM74A4Q5TZK3 123 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 TMEM75Q8N9X5 138 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 OR2T35Q8NGX2 323 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 DTD1Q8TEA8 209 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 ZCCHC13Q8WW36 166 aaKnown RBP0.68□□□□□ -2.3
PRPF39-208ENST00000554785 DNAJC9Q8WXX5 260 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 TXNDC17Q9BRA2 123 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 DCSTAMPQ9H295 470 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 ENY2Q9NPA8 101 aa0.68□□□□□ -2.3
PRPF39-208ENST00000554785 A0A087WX48 190 aa0.67□□□□□ -2.3
PRPF39-208ENST00000554785 A0A096LNI7 61 aa0.67□□□□□ -2.3
PRPF39-208ENST00000554785 SDHAF1A6NFY7 115 aa0.67□□□□□ -2.3
PRPF39-208ENST00000554785 C8orf87E5RJ46 101 aa0.67□□□□□ -2.3
PRPF39-208ENST00000554785 SH2D1AO60880 128 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 184.5 ms