RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 C11orf45Q8TAV5 145 aa11.52□□□□□ -0.57
ACTN1-209ENST00000553659 DDTP30046 118 aa11.51□□□□□ -0.57
ACTN1-209ENST00000553659 NANOS2P60321 138 aaKnown RBP11.51□□□□□ -0.57
ACTN1-209ENST00000553659 NUTF2P61970 127 aaKnown RBP11.51□□□□□ -0.57
ACTN1-209ENST00000553659 STHQ8IWL8 128 aa11.51□□□□□ -0.57
ACTN1-209ENST00000553659 NRACQ8N912 160 aa11.51□□□□□ -0.57
ACTN1-209ENST00000553659 OR11H2Q8NH07 326 aa11.51□□□□□ -0.57
ACTN1-209ENST00000553659 PTH2Q96A98 100 aa11.51□□□□□ -0.57
ACTN1-209ENST00000553659 C11orf68Q9H3H3 251 aaKnown RBP11.51□□□□□ -0.57
ACTN1-209ENST00000553659 FCER1GP30273 86 aa11.5□□□□□ -0.57
ACTN1-209ENST00000553659 RPL32P62910 135 aaKnown RBP11.5□□□□□ -0.57
ACTN1-209ENST00000553659 C14orf178Q8N769 122 aaPredicted RBP11.5□□□□□ -0.57
ACTN1-209ENST00000553659 NDUFAF3Q9BU61 184 aa11.5□□□□□ -0.57
ACTN1-209ENST00000553659 CBY3A6NI87 242 aa11.49□□□□□ -0.57
ACTN1-209ENST00000553659 LINC01549A6NIU2 74 aa11.49□□□□□ -0.57
ACTN1-209ENST00000553659 LINC00587B1AMM8 73 aa11.49□□□□□ -0.57
ACTN1-209ENST00000553659 G0S2P27469 103 aa11.49□□□□□ -0.57
ACTN1-209ENST00000553659 TCTAP57738 103 aa11.49□□□□□ -0.57
ACTN1-209ENST00000553659 ZNF415Q09FC8 603 aa11.49□□□□□ -0.57
ACTN1-209ENST00000553659 PRO1933Q9H354 126 aa11.49□□□□□ -0.57
ACTN1-209ENST00000553659 MGPP08493 103 aa11.48□□□□□ -0.57
ACTN1-209ENST00000553659 ORMDL2Q53FV1 153 aa11.48□□□□□ -0.57
ACTN1-209ENST00000553659 SMIM2Q9BVW6 85 aa11.48□□□□□ -0.57
ACTN1-209ENST00000553659 KIF25-AS1Q9Y6Z4 181 aa11.48□□□□□ -0.57
ACTN1-209ENST00000553659 IGLV2-18A0A075B6J9 118 aa11.47□□□□□ -0.57
ACTN1-209ENST00000553659 TRAV9-2A0A087WT02 112 aa11.47□□□□□ -0.57
ACTN1-209ENST00000553659 SUMO2P61956 95 aaKnown RBP11.47□□□□□ -0.57
ACTN1-209ENST00000553659 LAGE3Q14657 143 aa11.47□□□□□ -0.57
ACTN1-209ENST00000553659 AGRNO00468 2067 aa11.47□□□□□ -0.57
ACTN1-209ENST00000553659 A0A096LNJ9 63 aa11.46□□□□□ -0.57
ACTN1-209ENST00000553659 HSBP1L1C9JCN9 74 aa11.46□□□□□ -0.57
ACTN1-209ENST00000553659 ATP5LO75964 103 aa11.46□□□□□ -0.57
ACTN1-209ENST00000553659 SPATA45Q537H7 98 aa11.46□□□□□ -0.57
ACTN1-209ENST00000553659 LINC01545Q5VT33 79 aa11.46□□□□□ -0.57
ACTN1-209ENST00000553659 ZNF705AQ6ZN79 300 aaPredicted RBP11.46□□□□□ -0.57
ACTN1-209ENST00000553659 TRPT1Q86TN4 253 aaKnown RBP11.46□□□□□ -0.57
ACTN1-209ENST00000553659 MRPL52Q86TS9 123 aaKnown RBP11.46□□□□□ -0.57
ACTN1-209ENST00000553659 SPXQ9BT56 116 aa11.46□□□□□ -0.57
ACTN1-209ENST00000553659 MDFICQ9P1T7 246 aa11.46□□□□□ -0.57
ACTN1-209ENST00000553659 PAM16Q9Y3D7 125 aa11.46□□□□□ -0.57
ACTN1-209ENST00000553659 DEFB4AO15263 64 aa11.45□□□□□ -0.58
ACTN1-209ENST00000553659 GATA1P15976 413 aaPredicted RBP11.45□□□□□ -0.58
ACTN1-209ENST00000553659 LGALS9BQ3B8N2 356 aa11.45□□□□□ -0.58
ACTN1-209ENST00000553659 RASL10AQ92737 203 aa11.45□□□□□ -0.58
ACTN1-209ENST00000553659 IFI27L1Q96BM0 104 aa11.45□□□□□ -0.58
ACTN1-209ENST00000553659 TRAV26-2A0A0B4J265 109 aa11.44□□□□□ -0.58
ACTN1-209ENST00000553659 A8MWV9 139 aa11.44□□□□□ -0.58
ACTN1-209ENST00000553659 H7C1H1 209 aa11.44□□□□□ -0.58
ACTN1-209ENST00000553659 TCAPO15273 167 aa11.44□□□□□ -0.58
ACTN1-209ENST00000553659 FXYD7P58549 80 aa11.44□□□□□ -0.58
ACTN1-209ENST00000553659 MORN3Q6PF18 240 aaPredicted RBP11.44□□□□□ -0.58
ACTN1-209ENST00000553659 LINC01587Q99440 93 aa11.44□□□□□ -0.58
ACTN1-209ENST00000553659 MIEN1Q9BRT3 115 aa11.44□□□□□ -0.58
ACTN1-209ENST00000553659 ST20Q9HBF5 79 aa11.44□□□□□ -0.58
ACTN1-209ENST00000553659 APLNQ9ULZ1 77 aa11.44□□□□□ -0.58
ACTN1-209ENST00000553659 HERC2O95714 4834 aa11.44□□□□□ -0.58
ACTN1-209ENST00000553659 TRBV6-5A0A0K0K1A5 114 aa11.43□□□□□ -0.58
ACTN1-209ENST00000553659 IGLL5B9A064 214 aa11.43□□□□□ -0.58
ACTN1-209ENST00000553659 M0R2P5 195 aa11.43□□□□□ -0.58
ACTN1-209ENST00000553659 GAS8-AS1O95177 125 aa11.43□□□□□ -0.58
ACTN1-209ENST00000553659 LINC00315P59091 139 aa11.43□□□□□ -0.58
ACTN1-209ENST00000553659 ZNF876PQ49A33 203 aa11.43□□□□□ -0.58
ACTN1-209ENST00000553659 LINC00173Q6ZV60 143 aa11.43□□□□□ -0.58
ACTN1-209ENST00000553659 C1QTNF4Q9BXJ3 329 aa11.43□□□□□ -0.58
ACTN1-209ENST00000553659 UQCR10Q9UDW1 63 aa11.43□□□□□ -0.58
ACTN1-209ENST00000553659 RBMY1A1P0DJD3 496 aaKnown RBP11.42□□□□□ -0.58
ACTN1-209ENST00000553659 RBMY1CP0DJD4 496 aa11.42□□□□□ -0.58
ACTN1-209ENST00000553659 RBMY1FQ15415 496 aaKnown RBP11.42□□□□□ -0.58
ACTN1-209ENST00000553659 SUMO4Q6EEV6 95 aa11.42□□□□□ -0.58
ACTN1-209ENST00000553659 Q8NAQ8 132 aa11.42□□□□□ -0.58
ACTN1-209ENST00000553659 DNAH10Q8IVF4 4471 aa11.42□□□□□ -0.58
ACTN1-209ENST00000553659 F5H697 171 aa11.41□□□□□ -0.58
ACTN1-209ENST00000553659 RHODO00212 210 aa11.41□□□□□ -0.58
ACTN1-209ENST00000553659 VCYO14598 125 aa11.41□□□□□ -0.58
ACTN1-209ENST00000553659 LBHQ53QV2 105 aaPredicted RBP11.41□□□□□ -0.58
ACTN1-209ENST00000553659 TMEM208Q9BTX3 173 aa11.41□□□□□ -0.58
ACTN1-209ENST00000553659 NUDT3O95989 172 aa11.4□□□□□ -0.58
ACTN1-209ENST00000553659 CRYGDP07320 174 aa11.4□□□□□ -0.58
ACTN1-209ENST00000553659 ZNF56Q15929 161 aa11.4□□□□□ -0.58
ACTN1-209ENST00000553659 KIR2DL4Q99706 377 aa11.4□□□□□ -0.58
ACTN1-209ENST00000553659 GOLT1BQ9Y3E0 138 aa11.4□□□□□ -0.58
ACTN1-209ENST00000553659 GIG44P09565 113 aaPredicted RBP11.39□□□□□ -0.59
ACTN1-209ENST00000553659 A0A087WWL8 130 aa11.38□□□□□ -0.59
ACTN1-209ENST00000553659 IGHV4-28A0A0C4DH34 117 aa11.38□□□□□ -0.59
ACTN1-209ENST00000553659 IGLC3P0DOY3 106 aa11.38□□□□□ -0.59
ACTN1-209ENST00000553659 MIFP14174 115 aa11.38□□□□□ -0.59
ACTN1-209ENST00000553659 FAM74A4Q5TZK3 123 aa11.38□□□□□ -0.59
ACTN1-209ENST00000553659 RPL39LQ96EH5 51 aaKnown RBP11.38□□□□□ -0.59
ACTN1-209ENST00000553659 C14orf144Q96I85 54 aa11.38□□□□□ -0.59
ACTN1-209ENST00000553659 H0Y8G0 127 aa11.37□□□□□ -0.59
ACTN1-209ENST00000553659 POLR2KP53803 58 aaKnown RBP11.37□□□□□ -0.59
ACTN1-209ENST00000553659 ATOH7Q8N100 152 aa11.37□□□□□ -0.59
ACTN1-209ENST00000553659 C11orf72Q8NBR9 251 aa11.37□□□□□ -0.59
ACTN1-209ENST00000553659 TOMM6Q96B49 74 aa11.37□□□□□ -0.59
ACTN1-209ENST00000553659 XCL2Q9UBD3 114 aa11.37□□□□□ -0.59
ACTN1-209ENST00000553659 TRAV10A0A0B4J240 114 aa11.36□□□□□ -0.59
ACTN1-209ENST00000553659 TRBV27A0A0K0K1C4 114 aa11.36□□□□□ -0.59
ACTN1-209ENST00000553659 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.36□□□□□ -0.59
ACTN1-209ENST00000553659 M0QY20 66 aa11.36□□□□□ -0.59
ACTN1-209ENST00000553659 HTN1P15515 57 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms