RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 SPINK14Q6IE38 97 aa3.86□□□□□ -1.79
LSM3P2-201ENST00000551246 Q6ZS52 159 aa3.86□□□□□ -1.79
LSM3P2-201ENST00000551246 Q8N2B8 174 aa3.86□□□□□ -1.79
LSM3P2-201ENST00000551246 ZFAND2AQ8N6M9 145 aa3.86□□□□□ -1.79
LSM3P2-201ENST00000551246 MDS2Q8NDY4 140 aa3.86□□□□□ -1.79
LSM3P2-201ENST00000551246 MAFAQ8NHW3 353 aaPredicted RBP3.86□□□□□ -1.79
LSM3P2-201ENST00000551246 C10orf105Q8TEF2 133 aa3.86□□□□□ -1.79
LSM3P2-201ENST00000551246 ITLN2Q8WWU7 325 aaPredicted RBP3.86□□□□□ -1.79
LSM3P2-201ENST00000551246 BBC3Q96PG8 261 aaPredicted RBP3.86□□□□□ -1.79
LSM3P2-201ENST00000551246 KRTAP4-5Q9BYR2 181 aa3.86□□□□□ -1.79
LSM3P2-201ENST00000551246 SPRR3Q9UBC9 169 aa3.86□□□□□ -1.79
LSM3P2-201ENST00000551246 DNAH12Q6ZR08 3092 aa3.86□□□□□ -1.79
LSM3P2-201ENST00000551246 TRAV8-3A0A0A6YYJ7 113 aa3.85□□□□□ -1.79
LSM3P2-201ENST00000551246 CLPSL1A2RUU4 121 aa3.85□□□□□ -1.79
LSM3P2-201ENST00000551246 IGHV1-46P01743 117 aa3.85□□□□□ -1.79
LSM3P2-201ENST00000551246 CTSGP08311 255 aa3.85□□□□□ -1.79
LSM3P2-201ENST00000551246 CCL3L1P16619 93 aa3.85□□□□□ -1.79
LSM3P2-201ENST00000551246 XCL1P47992 114 aa3.85□□□□□ -1.79
LSM3P2-201ENST00000551246 PRR9Q5T870 116 aa3.85□□□□□ -1.79
LSM3P2-201ENST00000551246 SPANXN1Q5VSR9 72 aa3.85□□□□□ -1.79
LSM3P2-201ENST00000551246 Q6ZSV7 163 aa3.85□□□□□ -1.79
LSM3P2-201ENST00000551246 NPBQ8NG41 125 aa3.85□□□□□ -1.79
LSM3P2-201ENST00000551246 RNASE6Q93091 150 aaKnown RBP3.85□□□□□ -1.79
LSM3P2-201ENST00000551246 VSIG2Q96IQ7 327 aa3.85□□□□□ -1.79
LSM3P2-201ENST00000551246 XCL2Q9UBD3 114 aa3.85□□□□□ -1.79
LSM3P2-201ENST00000551246 ASCC3Q8N3C0 2202 aaKnown RBP3.85□□□□□ -1.79
LSM3P2-201ENST00000551246 IGLV4-3A0A075B6K6 122 aa3.84□□□□□ -1.79
LSM3P2-201ENST00000551246 IGLV5-45A0A087WSX0 123 aa3.84□□□□□ -1.79
LSM3P2-201ENST00000551246 A0A0J9YXV3 536 aa3.84□□□□□ -1.79
LSM3P2-201ENST00000551246 LINC01565O15544 149 aa3.84□□□□□ -1.79
LSM3P2-201ENST00000551246 LYZL6O75951 148 aa3.84□□□□□ -1.79
LSM3P2-201ENST00000551246 RNASE3P12724 160 aaKnown RBP3.84□□□□□ -1.79
LSM3P2-201ENST00000551246 CCL5P13501 91 aa3.84□□□□□ -1.79
LSM3P2-201ENST00000551246 LOXP28300 417 aaPredicted RBP3.84□□□□□ -1.79
LSM3P2-201ENST00000551246 RPL39P62891 51 aaKnown RBP3.84□□□□□ -1.79
LSM3P2-201ENST00000551246 CFHR3Q02985 330 aa3.84□□□□□ -1.79
LSM3P2-201ENST00000551246 KLKP1Q107X0 134 aa3.84□□□□□ -1.79
LSM3P2-201ENST00000551246 C1orf195Q5TG92 126 aa3.84□□□□□ -1.79
LSM3P2-201ENST00000551246 ATP5EP2Q5VTU8 51 aa3.84□□□□□ -1.79
LSM3P2-201ENST00000551246 FAM19A1Q7Z5A9 133 aa3.84□□□□□ -1.79
LSM3P2-201ENST00000551246 C20orf203Q8NBC4 194 aa3.84□□□□□ -1.79
LSM3P2-201ENST00000551246 DOCK7Q96N67 2140 aa3.84□□□□□ -1.79
LSM3P2-201ENST00000551246 HES7Q9BYE0 225 aa3.84□□□□□ -1.79
LSM3P2-201ENST00000551246 LINC00846Q9NV44 126 aa3.84□□□□□ -1.79
LSM3P2-201ENST00000551246 KAAG1Q9UBP8 84 aa3.84□□□□□ -1.79
LSM3P2-201ENST00000551246 ZNF580Q9UK33 172 aa3.84□□□□□ -1.79
LSM3P2-201ENST00000551246 KNL1Q8NG31 2342 aa3.84□□□□□ -1.79
LSM3P2-201ENST00000551246 DSCAMO60469 2012 aa3.83□□□□□ -1.8
LSM3P2-201ENST00000551246 PRR14LQ5THK1 2151 aa3.83□□□□□ -1.8
LSM3P2-201ENST00000551246 SVILO95425 2214 aa3.83□□□□□ -1.8
LSM3P2-201ENST00000551246 IBA57-AS1B1ANH7 110 aa3.83□□□□□ -1.8
LSM3P2-201ENST00000551246 SOCS3O14543 225 aa3.83□□□□□ -1.8
LSM3P2-201ENST00000551246 NDUFA1O15239 70 aa3.83□□□□□ -1.8
LSM3P2-201ENST00000551246 IGHG2P01859 326 aa3.83□□□□□ -1.8
LSM3P2-201ENST00000551246 IGHV1-8P0DP01 117 aa3.83□□□□□ -1.8
LSM3P2-201ENST00000551246 RPL28P46779 137 aaKnown RBP3.83□□□□□ -1.8
LSM3P2-201ENST00000551246 C6orf226Q5I0X4 101 aa3.83□□□□□ -1.8
LSM3P2-201ENST00000551246 SUMO4Q6EEV6 95 aa3.83□□□□□ -1.8
LSM3P2-201ENST00000551246 FAM223AQ8IWN6 122 aa3.83□□□□□ -1.8
LSM3P2-201ENST00000551246 DEFB119Q8N690 84 aa3.83□□□□□ -1.8
LSM3P2-201ENST00000551246 FAM218AQ96MZ4 157 aa3.83□□□□□ -1.8
LSM3P2-201ENST00000551246 NDUFA12Q9UI09 145 aa3.83□□□□□ -1.8
LSM3P2-201ENST00000551246 CNTRLQ7Z7A1 2325 aa3.83□□□□□ -1.8
LSM3P2-201ENST00000551246 CEP350Q5VT06 3117 aa3.82□□□□□ -1.8
LSM3P2-201ENST00000551246 RAI1Q7Z5J4 1906 aaPredicted RBP3.82□□□□□ -1.8
LSM3P2-201ENST00000551246 TRAV7A0A075B6U4 112 aa3.82□□□□□ -1.8
LSM3P2-201ENST00000551246 TRAV21A0A0B4J279 112 aa3.82□□□□□ -1.8
LSM3P2-201ENST00000551246 IGLV5-39A0A0G2JS06 123 aa3.82□□□□□ -1.8
LSM3P2-201ENST00000551246 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.82□□□□□ -1.8
LSM3P2-201ENST00000551246 M0QY20 66 aa3.82□□□□□ -1.8
LSM3P2-201ENST00000551246 M0R1W7 72 aa3.82□□□□□ -1.8
LSM3P2-201ENST00000551246 CCL4P13236 92 aa3.82□□□□□ -1.8
LSM3P2-201ENST00000551246 PROK1P58294 105 aa3.82□□□□□ -1.8
LSM3P2-201ENST00000551246 SOSTDC1Q6X4U4 206 aa3.82□□□□□ -1.8
LSM3P2-201ENST00000551246 FAM19A3Q7Z5A8 133 aa3.82□□□□□ -1.8
LSM3P2-201ENST00000551246 PRSS33Q8NF86 280 aa3.82□□□□□ -1.8
LSM3P2-201ENST00000551246 FAM110DQ8TAY7 271 aaPredicted RBP3.82□□□□□ -1.8
LSM3P2-201ENST00000551246 LINC00308Q8TCZ7 52 aa3.82□□□□□ -1.8
LSM3P2-201ENST00000551246 COPS9Q8WXC6 57 aa3.82□□□□□ -1.8
LSM3P2-201ENST00000551246 LINC00167Q96N53 147 aa3.82□□□□□ -1.8
LSM3P2-201ENST00000551246 TMEM243Q9BU79 118 aa3.82□□□□□ -1.8
LSM3P2-201ENST00000551246 PKIGQ9Y2B9 76 aa3.82□□□□□ -1.8
LSM3P2-201ENST00000551246 INTS1Q8N201 2190 aaKnown RBP3.82□□□□□ -1.8
LSM3P2-201ENST00000551246 PI4KAP42356 2102 aa3.82□□□□□ -1.8
LSM3P2-201ENST00000551246 ARFGEF3Q5TH69 2177 aa3.81□□□□□ -1.8
LSM3P2-201ENST00000551246 A0A087WVE0 104 aa3.81□□□□□ -1.8
LSM3P2-201ENST00000551246 IGHV3-72A0A0B4J1Y9 119 aa3.81□□□□□ -1.8
LSM3P2-201ENST00000551246 IGKV3D-7A0A0C4DH55 119 aa3.81□□□□□ -1.8
LSM3P2-201ENST00000551246 KNCNA6PVL3 124 aa3.81□□□□□ -1.8
LSM3P2-201ENST00000551246 BUB1B-PAK6H3BSN5 160 aa3.81□□□□□ -1.8
LSM3P2-201ENST00000551246 SPRY3O43610 288 aa3.81□□□□□ -1.8
LSM3P2-201ENST00000551246 TRBV12-3P01733 135 aa3.81□□□□□ -1.8
LSM3P2-201ENST00000551246 APELAP0DMC3 54 aa3.81□□□□□ -1.8
LSM3P2-201ENST00000551246 ATP5EP56381 51 aaPredicted RBP3.81□□□□□ -1.8
LSM3P2-201ENST00000551246 Q6ZRU5 148 aa3.81□□□□□ -1.8
LSM3P2-201ENST00000551246 VMO1Q7Z5L0 202 aa3.81□□□□□ -1.8
LSM3P2-201ENST00000551246 RNF182Q8N6D2 247 aa3.81□□□□□ -1.8
LSM3P2-201ENST00000551246 Q8N6K4 173 aa3.81□□□□□ -1.8
LSM3P2-201ENST00000551246 DEFB108BQ8NET1 73 aa3.81□□□□□ -1.8
LSM3P2-201ENST00000551246 OPRPNQ99935 248 aaPredicted RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms