RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 TINCRA0A1B0GVN0 87 aa2.2□□□□□ -2.06
LIMA1-205ENST00000550592 TMEM235A6NFC5 223 aa2.2□□□□□ -2.06
LIMA1-205ENST00000550592 GGT3PA6NGU5 568 aa2.2□□□□□ -2.06
LIMA1-205ENST00000550592 OR4C46A6NHA9 309 aa2.2□□□□□ -2.06
LIMA1-205ENST00000550592 H3BQ15 152 aa2.2□□□□□ -2.06
LIMA1-205ENST00000550592 H7C1C5 153 aa2.2□□□□□ -2.06
LIMA1-205ENST00000550592 J3KT08 172 aa2.2□□□□□ -2.06
LIMA1-205ENST00000550592 GNGT2O14610 69 aa2.2□□□□□ -2.06
LIMA1-205ENST00000550592 IGLV1-51P01701 117 aa2.2□□□□□ -2.06
LIMA1-205ENST00000550592 CD14P08571 375 aa2.2□□□□□ -2.06
LIMA1-205ENST00000550592 CXCL2P19875 107 aa2.2□□□□□ -2.06
LIMA1-205ENST00000550592 GADD45AP24522 165 aa2.2□□□□□ -2.06
LIMA1-205ENST00000550592 RPL12P30050 165 aaKnown RBP2.2□□□□□ -2.06
LIMA1-205ENST00000550592 FUSP35637 526 aaKnown RBP eCLIP2.2□□□□□ -2.06
LIMA1-205ENST00000550592 RPS25P62851 125 aaKnown RBP2.2□□□□□ -2.06
LIMA1-205ENST00000550592 FABP5Q01469 135 aa2.2□□□□□ -2.06
LIMA1-205ENST00000550592 OR2F1Q13607 317 aa2.2□□□□□ -2.06
LIMA1-205ENST00000550592 ADIRFQ15847 76 aa2.2□□□□□ -2.06
LIMA1-205ENST00000550592 ACOT6Q3I5F7 207 aaPredicted RBP2.2□□□□□ -2.06
LIMA1-205ENST00000550592 KRTAP6-3Q3LI67 103 aa2.2□□□□□ -2.06
LIMA1-205ENST00000550592 SLC25A26Q70HW3 274 aa2.2□□□□□ -2.06
LIMA1-205ENST00000550592 ZNF676Q8N7Q3 588 aa2.2□□□□□ -2.06
LIMA1-205ENST00000550592 OR4B1Q8NGF8 309 aa2.2□□□□□ -2.06
LIMA1-205ENST00000550592 OR5D16Q8NGK9 328 aa2.2□□□□□ -2.06
LIMA1-205ENST00000550592 OR2T27Q8NH04 317 aa2.2□□□□□ -2.06
LIMA1-205ENST00000550592 SLAMF6Q96DU3 332 aa2.2□□□□□ -2.06
LIMA1-205ENST00000550592 DPY30Q9C005 99 aa2.2□□□□□ -2.06
LIMA1-205ENST00000550592 OR51I2Q9H344 312 aa2.2□□□□□ -2.06
LIMA1-205ENST00000550592 GPR84Q9NQS5 396 aa2.2□□□□□ -2.06
LIMA1-205ENST00000550592 TP53TG1Q9Y2A0 90 aa2.2□□□□□ -2.06
LIMA1-205ENST00000550592 TRAV36DV7A0A075B6V5 113 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 A0A087WWC5 75 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 A0A087WX48 190 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 FXYD6-FXYD2A0A087WZ82 144 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 LOC100130705A0A1B0GUX0 176 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 LOC102725191A0A1B0GVB3 256 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 hADV38S2A0JD32 116 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 NAP1L6A6NFF2 107 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 BBIP1A8MTZ0 92 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 FABP5P3A8MUU1 101 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 SNRPGP15A8MWD9 76 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 B4DEV8 164 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 H7BYZ3 331 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 CREBL2O60519 120 aaPredicted RBP2.19□□□□□ -2.06
LIMA1-205ENST00000550592 HIST1H2BKO60814 126 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 HIST1H2BJP06899 126 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 CTSDP07339 412 aaPredicted RBP2.19□□□□□ -2.06
LIMA1-205ENST00000550592 SFTA3P0C7M3 94 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 LINC00032P0C843 101 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 TRGC1P0CF51 173 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 TPT1P13693 172 aaKnown RBP2.19□□□□□ -2.06
LIMA1-205ENST00000550592 HIST1H1DP16402 221 aaKnown RBP2.19□□□□□ -2.06
LIMA1-205ENST00000550592 HIST1H2BOP23527 126 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 HIST1H2BBP33778 126 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 MARCKSL1P49006 195 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 HIST1H2BDP58876 126 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 TPPP2P59282 170 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 HIST1H2BCP62807 126 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 PSG4Q00888 419 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 PPP1R1AQ13522 171 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 HIST2H2BEQ16778 126 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.19□□□□□ -2.06
LIMA1-205ENST00000550592 C1orf140Q5VVS0 124 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 EBLN2Q6P2I7 272 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 TNFAIP8L2Q6P589 184 aaPredicted RBP2.19□□□□□ -2.06
LIMA1-205ENST00000550592 SCXQ7RTU7 201 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 KRTAP13-1Q8IUC0 172 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 OR5AS1Q8N127 324 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 KCNRGQ8N5I3 272 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 DEFB125Q8N687 156 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.19□□□□□ -2.06
LIMA1-205ENST00000550592 ZNRF2Q8NHG8 242 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 PP6455Q8WZ26 134 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 HIST1H2BHQ93079 126 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 IMMP2LQ96T52 175 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 CCL13Q99616 98 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 HIST1H2BNQ99877 126 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 HIST1H2BMQ99879 126 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 ADAT1Q9BUB4 502 aaKnown RBP2.19□□□□□ -2.06
LIMA1-205ENST00000550592 TMEM70Q9BUB7 260 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 FXYD6Q9H0Q3 95 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 SMDT1Q9H4I9 107 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 CACFD1Q9UGQ2 172 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 LINC00527Q9UJ94 153 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 HILPDAQ9Y5L2 63 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 V9GYH0 126 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 VPS13BQ7Z7G8 4022 aa2.19□□□□□ -2.06
LIMA1-205ENST00000550592 A0A1B0GX51 115 aa2.18□□□□□ -2.06
LIMA1-205ENST00000550592 DAPL1A0PJW8 107 aa2.18□□□□□ -2.06
LIMA1-205ENST00000550592 FAM159BA6NKW6 160 aa2.18□□□□□ -2.06
LIMA1-205ENST00000550592 SLC25A20O43772 301 aa2.18□□□□□ -2.06
LIMA1-205ENST00000550592 CYB5AP00167 134 aa2.18□□□□□ -2.06
LIMA1-205ENST00000550592 IL5P05113 134 aa2.18□□□□□ -2.06
LIMA1-205ENST00000550592 CTSGP08311 255 aa2.18□□□□□ -2.06
LIMA1-205ENST00000550592 SPINK8P0C7L1 97 aa2.18□□□□□ -2.06
LIMA1-205ENST00000550592 IGLC1P0CG04 106 aa2.18□□□□□ -2.06
LIMA1-205ENST00000550592 ORM2P19652 201 aa2.18□□□□□ -2.06
LIMA1-205ENST00000550592 CXCL3P19876 107 aa2.18□□□□□ -2.06
LIMA1-205ENST00000550592 RPS4Y1P22090 263 aaKnown RBP2.18□□□□□ -2.06
LIMA1-205ENST00000550592 HSPE1P61604 102 aaKnown RBP2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms