RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 OR10J3Q5JRS4 329 aa6.74□□□□□ -1.33
YBX3-215ENST00000544504 SUMO4Q6EEV6 95 aa6.74□□□□□ -1.33
YBX3-215ENST00000544504 C11orf45Q8TAV5 145 aa6.74□□□□□ -1.33
YBX3-215ENST00000544504 ZNF479Q96JC4 524 aa6.74□□□□□ -1.33
YBX3-215ENST00000544504 C20orf78Q9BR46 151 aa6.74□□□□□ -1.33
YBX3-215ENST00000544504 PRADC1Q9BSG0 188 aa6.74□□□□□ -1.33
YBX3-215ENST00000544504 ALKBH7Q9BT30 221 aaPredicted RBP6.74□□□□□ -1.33
YBX3-215ENST00000544504 MAP1LC3AQ9H492 121 aa6.74□□□□□ -1.33
YBX3-215ENST00000544504 NIT2Q9NQR4 276 aa6.74□□□□□ -1.33
YBX3-215ENST00000544504 IGHV3-73A0A0B4J1V6 119 aa6.73□□□□□ -1.33
YBX3-215ENST00000544504 K7EQD1 137 aa6.73□□□□□ -1.33
YBX3-215ENST00000544504 M0QY20 66 aa6.73□□□□□ -1.33
YBX3-215ENST00000544504 TCAPO15273 167 aa6.73□□□□□ -1.33
YBX3-215ENST00000544504 TNFRSF6BO95407 300 aa6.73□□□□□ -1.33
YBX3-215ENST00000544504 GATA1P15976 413 aaPredicted RBP6.73□□□□□ -1.33
YBX3-215ENST00000544504 PMCHP20382 165 aa6.73□□□□□ -1.33
YBX3-215ENST00000544504 SRIP30626 198 aa6.73□□□□□ -1.33
YBX3-215ENST00000544504 KIAA1644Q3SXP7 199 aa6.73□□□□□ -1.33
YBX3-215ENST00000544504 NXT2Q9NPJ8 142 aaKnown RBP6.73□□□□□ -1.33
YBX3-215ENST00000544504 PRO0255Q9UI72 69 aa6.73□□□□□ -1.33
YBX3-215ENST00000544504 CELA1Q9UNI1 258 aa6.73□□□□□ -1.33
YBX3-215ENST00000544504 TRBV6-5A0A0K0K1A5 114 aa6.72□□□□□ -1.33
YBX3-215ENST00000544504 HIST1H2BKO60814 126 aa6.72□□□□□ -1.33
YBX3-215ENST00000544504 HIST1H2BJP06899 126 aa6.72□□□□□ -1.33
YBX3-215ENST00000544504 HIST1H2BOP23527 126 aa6.72□□□□□ -1.33
YBX3-215ENST00000544504 HIST1H2BBP33778 126 aa6.72□□□□□ -1.33
YBX3-215ENST00000544504 HIST1H2BDP58876 126 aa6.72□□□□□ -1.33
YBX3-215ENST00000544504 HIST1H2BCP62807 126 aa6.72□□□□□ -1.33
YBX3-215ENST00000544504 RPL32P62910 135 aaKnown RBP6.72□□□□□ -1.33
YBX3-215ENST00000544504 RPL36AP83881 106 aaKnown RBP6.72□□□□□ -1.33
YBX3-215ENST00000544504 Q0VG73 95 aa6.72□□□□□ -1.33
YBX3-215ENST00000544504 FHL2Q14192 279 aa6.72□□□□□ -1.33
YBX3-215ENST00000544504 HIST2H2BEQ16778 126 aa6.72□□□□□ -1.33
YBX3-215ENST00000544504 C12orf74Q32Q52 190 aa6.72□□□□□ -1.33
YBX3-215ENST00000544504 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.72□□□□□ -1.33
YBX3-215ENST00000544504 HIST1H2BHQ93079 126 aa6.72□□□□□ -1.33
YBX3-215ENST00000544504 RPL36ALQ969Q0 106 aaKnown RBP6.72□□□□□ -1.33
YBX3-215ENST00000544504 HIST1H2BNQ99877 126 aa6.72□□□□□ -1.33
YBX3-215ENST00000544504 HIST1H2BMQ99879 126 aa6.72□□□□□ -1.33
YBX3-215ENST00000544504 ST20Q9HBF5 79 aa6.72□□□□□ -1.33
YBX3-215ENST00000544504 HHLA3Q9XRX5 114 aa6.72□□□□□ -1.33
YBX3-215ENST00000544504 TNFRSF18Q9Y5U5 241 aa6.72□□□□□ -1.33
YBX3-215ENST00000544504 TRAV26-2A0A0B4J265 109 aa6.71□□□□□ -1.34
YBX3-215ENST00000544504 PRSS47A8MTI9 375 aa6.71□□□□□ -1.34
YBX3-215ENST00000544504 F5H768 121 aa6.71□□□□□ -1.34
YBX3-215ENST00000544504 K7EMI3 77 aa6.71□□□□□ -1.34
YBX3-215ENST00000544504 NCR2O95944 276 aa6.71□□□□□ -1.34
YBX3-215ENST00000544504 S100A6P06703 90 aa6.71□□□□□ -1.34
YBX3-215ENST00000544504 SUMO2P61956 95 aaKnown RBP6.71□□□□□ -1.34
YBX3-215ENST00000544504 SH2D6Q7Z4S9 175 aa6.71□□□□□ -1.34
YBX3-215ENST00000544504 BAGE3Q86Y29 109 aa6.71□□□□□ -1.34
YBX3-215ENST00000544504 SLC25A29Q8N8R3 303 aa6.71□□□□□ -1.34
YBX3-215ENST00000544504 NRACQ8N912 160 aa6.71□□□□□ -1.34
YBX3-215ENST00000544504 PRSS3P2Q8NHM4 247 aa6.71□□□□□ -1.34
YBX3-215ENST00000544504 C18orf32Q8TCD1 76 aa6.71□□□□□ -1.34
YBX3-215ENST00000544504 LINC00476Q8WZB0 136 aa6.71□□□□□ -1.34
YBX3-215ENST00000544504 TRBV7-3A0A075B6L6 115 aa6.7□□□□□ -1.34
YBX3-215ENST00000544504 TRAV10A0A0B4J240 114 aa6.7□□□□□ -1.34
YBX3-215ENST00000544504 SMKR1H3BMG3 65 aa6.7□□□□□ -1.34
YBX3-215ENST00000544504 H3BNG1 76 aa6.7□□□□□ -1.34
YBX3-215ENST00000544504 VCYO14598 125 aa6.7□□□□□ -1.34
YBX3-215ENST00000544504 PAX4O43316 350 aa6.7□□□□□ -1.34
YBX3-215ENST00000544504 NPYP01303 97 aa6.7□□□□□ -1.34
YBX3-215ENST00000544504 G0S2P27469 103 aa6.7□□□□□ -1.34
YBX3-215ENST00000544504 CRYBA4P53673 196 aa6.7□□□□□ -1.34
YBX3-215ENST00000544504 VPS13DQ5THJ4 4388 aa6.7□□□□□ -1.34
YBX3-215ENST00000544504 NACAE9PAV3 2078 aa6.7□□□□□ -1.34
YBX3-215ENST00000544504 SDHAF1A6NFY7 115 aa6.69□□□□□ -1.34
YBX3-215ENST00000544504 HTN3P15516 51 aa6.69□□□□□ -1.34
YBX3-215ENST00000544504 TMEM97Q5BJF2 176 aa6.69□□□□□ -1.34
YBX3-215ENST00000544504 COA6Q5JTJ3 125 aaKnown RBP6.69□□□□□ -1.34
YBX3-215ENST00000544504 Q6ZSN1 163 aa6.69□□□□□ -1.34
YBX3-215ENST00000544504 Q6ZTC4 211 aa6.69□□□□□ -1.34
YBX3-215ENST00000544504 FA2HQ7L5A8 372 aa6.69□□□□□ -1.34
YBX3-215ENST00000544504 Q8N8P6 123 aa6.69□□□□□ -1.34
YBX3-215ENST00000544504 NEXN-AS1Q8NBZ9 246 aa6.69□□□□□ -1.34
YBX3-215ENST00000544504 CHCHD1Q96BP2 118 aaKnown RBP6.69□□□□□ -1.34
YBX3-215ENST00000544504 RPL39LQ96EH5 51 aaKnown RBP6.69□□□□□ -1.34
YBX3-215ENST00000544504 KIR2DL4Q99706 377 aa6.69□□□□□ -1.34
YBX3-215ENST00000544504 TMEM70Q9BUB7 260 aa6.69□□□□□ -1.34
YBX3-215ENST00000544504 SMIM2Q9BVW6 85 aa6.69□□□□□ -1.34
YBX3-215ENST00000544504 DEFB131BA0A096LNP1 70 aa6.68□□□□□ -1.34
YBX3-215ENST00000544504 TRBV27A0A0K0K1C4 114 aa6.68□□□□□ -1.34
YBX3-215ENST00000544504 LINC01549A6NIU2 74 aa6.68□□□□□ -1.34
YBX3-215ENST00000544504 LY6G6CO95867 125 aa6.68□□□□□ -1.34
YBX3-215ENST00000544504 HOXA5P20719 270 aa6.68□□□□□ -1.34
YBX3-215ENST00000544504 POLR2KP53803 58 aaKnown RBP6.68□□□□□ -1.34
YBX3-215ENST00000544504 NANOS2P60321 138 aaKnown RBP6.68□□□□□ -1.34
YBX3-215ENST00000544504 MRPL23Q16540 153 aaKnown RBP6.68□□□□□ -1.34
YBX3-215ENST00000544504 DAZ4Q86SG3 579 aaKnown RBP6.68□□□□□ -1.34
YBX3-215ENST00000544504 DAZ3Q9NR90 486 aaKnown RBP6.68□□□□□ -1.34
YBX3-215ENST00000544504 TRAV26-1A0A087WT03 109 aa6.67□□□□□ -1.34
YBX3-215ENST00000544504 LOC389332A0A1B0GUA5 103 aa6.67□□□□□ -1.34
YBX3-215ENST00000544504 I3L3M4 83 aa6.67□□□□□ -1.34
YBX3-215ENST00000544504 HSBP1O75506 76 aa6.67□□□□□ -1.34
YBX3-215ENST00000544504 LINC00614P0C842 121 aa6.67□□□□□ -1.34
YBX3-215ENST00000544504 GYPEP15421 78 aa6.67□□□□□ -1.34
YBX3-215ENST00000544504 NDUFA6P56556 154 aa6.67□□□□□ -1.34
YBX3-215ENST00000544504 ORMDL2Q53FV1 153 aa6.67□□□□□ -1.34
YBX3-215ENST00000544504 ZNRF2Q8NHG8 242 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms